G189821


Basic Information

Item Value
gene id G189821
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35891042 ~ 35985685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257335
ACTTGGTTTATTAAGAGCTTTAAGAAAGTTTTGTGTTCAAACGGACCATTGTGAGAAAaaagagcaacaaaaaaacgGTCAGACGGCTGTGTTCAGATCTGCCCAAATAAACCAGAGTCCAACACACAAAGTAGTGTTTCTTGTTCTTGAACTTCTTCACGATGTGACTGACGTGTACGACAGGATCATATATCCATTTGAATATGTAACTGTGATTAAAGATGCTTCAGACAGGAGTTTTTCAAGGTTTTGGTCGCCTTTTCAagcgtcttgctgcccgactcACAGATTATATTGTGTCTATGAGAACTTTACAGAACAGACACGTGGTTATTAAAAGGAGAATACCGGTGGATTTCAACACATAGCTCTGTTGTGTGTAAATGTGGAgagctgtcagtagcgagaaaaagaaaaacaaatcggTGCtacctacaccgtgttatcctcctgctagtgttagcacccaggaggctgaaacagggcagGTTTTGaatgtgcttttagcctcttaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgagaggtCGTTACAAGAGCCTACCCATGTGACGTGATGGTACTGAAGCACTCGTCTTGCCGACTCAACACCAGAACTAAACAGAAATGAATTAacacaacttttatgcatttctgtcacatctactgcagtcagattcactgtctTCACCCATGTGGAATGACtccacatgggtaggcactagTAATGACATCTCCAACATGTTAAGAGGGTAAAAGCAGGTTTAAAACctgccctgtttcagcctcctgggagCTAAGCGAGCTAGCAGGAGAATAACACAGTGTAGGCAGGCCCCTCATGCTCCATCCCAAGCCCAAGTTAGTGCCTCTATGGCTGGGAGTTGACCTCCAGGGCCCTCAGCCTCACCTCCCGTCCCcgttttcgtttttctcgctactgacagcactccaaatttacaaccAACAGAGCTAAGTGTTGAAATCCACCGGGATTCTCCTTTAAGCTAGTCTCTacccatagatatatatgtCAGTATATATCTATCTCTATGGTCTTTACCTTCGCagcgtcacccagatcgttggtctgattggttgaaggactatccaattacgcccagaggcatttgagcggcgtccgttggtgatgccctctttggaaatgggctgtgaataaagcttccccagaccccccctctctcagttacagctgagaagggtctggggtCAGCCAGGCTAGCAGATCAGTGAAGACTCCCACCTCTATGGGTCTGTGACGTTGTGTTCGCCAACATCAAGCTGTGAGGAAAGTGTTGGGCGGATGAAGTCTCTGATGTTTCTGGAGGTTTACTTGAGATCAGATTATGGGATGTGGCCCGTTGAGTTTGACCCTCTCCCCCCCTGAGCATCTTCTGCAGTAGCGCCAACGCTCGTTTAGGTTAACCACTTTAGAAAGTGCAGATTAAAGTCATCTTATTGGTAGAGCTGCAACGATCAGTCGACAGAAAAATTATCGCCAACTATTTCATTCAATCGTTAAGTCACTTTTCatgcaaaaatgtcagaaacgTCTGTTTTCATCCTCTCAGATATGAAGGTTTAGTTTGATATCAGATTCAAAAAACACAGCAGAGGTGACAGTTAGGGGCCAAAGAAACATTTAGGAAAGagaaatttaaagaaaaaacggccaaaatgttgattaaaggcccagacacaccaaccagacggccgaccgtcggcagtaAAGCCAGTGGGACTGATcagtagggctgtcctcgacaaaagaaattcttagtcgactaacacttataggattttgtcgactaatcgattagttgatttaattgaccGAGCTGTGtgctttgagaggtggttaagactagaaaagcacaatataaatgtagttaattaaccatctttaaaactgagtttctccacaattaatcctgcaaaagaaCCACTTTAAATCTTATGTTTACCAGAAATGTGCTCAGAAGtttcctgaaataaataattaagcatgaataagcataaaaaatgactaatcgactaaagaaatcttagtcgactaagaccaaaacgaccgattagtcgactaatcgactaagaggtggcagccctactgatcagtctccccgagttggtccagaaagttcctcagaacactgAAGAGACAAGCCCTAATaagtctccataacagcaggcggcgctaatctggattgtcgcccaaaaaatgaaaaccggcagctgattggacgaacgcgtcacgtgggtttggtttctctggaaattcaaagcaagactgtcatggcggctcgttcagaatacgatctcatattggactaaaatagttcaccgagacatgtttctggaaatatttgaagagagaaataggccgtgcgtctctgtgtgtgtgtttgtgtgt
>TU257338
ACTTGGTTTATTAAGAGCTTTAAGAAAGTTTTGTGTTCAAACGGACCATTGTGAGAAAaaagagcaacaaaaaaacgGTCAGACGGCTGTGTTCAGATCTGCCCAAATAAACCAGAGTCCAACACACAAAGTAGTGTTTCTTGTTCTTGAACTTCTTCACGATGTGACTGACGTGTACGACAGGATCATATATCCATTTGAATATGTAACTGTGATTAAAGATGCTTCAGACAGGAGTTTTTCAAGGTTTTGGTCGCCTTTTCAagcgtcttgctgcccgactcACAGATTATATTGTGTCTATGAGAACTTTACAGAACAGACACGTGGTTATTAAAAGGAGAATACCGGTGGATTTCAACACATAGCTCTGTTGTGTGTAAATGTGGAgagctgtcagtagcgagaaaaagaaaaacaaatcggTGCtacctacaccgtgttatcctcctgctagtgttagcacccaggaggctgaaacagggcagGTTTTGaatgtgcttttagcctcttaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgagaggtCGTTACAAGAGCCTACCCATGTGACGTGATGGTACTGAAGCACTCGTCTTGCCGACTCAACACCAGAACTAAACAGAAATGAATTAacacaacttttatgcatttctgtcacatctactgcagtcagattcactgtctTCACCCATGTGGAATGACtccacatgggtaggcactagTAATGACATCTCCAACATGTTAAGAGGGTAAAAGCAGGTCCAAAACCTGCC

Function

NR:

description
PREDICTED: inositol polyphosphate 1-phosphatase

GO: NA

KEGG:

id description
ko03420 Nucleotide excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU257335 True 2523 lncRNA 0.44 2 35891042 35910681
TU257338 False 868 lncRNA 0.43 2 35891042 35985685

Neighbor

gene id symbol gene type direction distance location
LOC120546647 LOC100696183,LOC102786976 coding upstream 35011 35843762 ~ 35856031 (+)
ccr6a NA coding upstream 487773 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 545112 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 697777 35187916 ~ 35193265 (+)
allc allc coding upstream 949711 34928418 ~ 34941331 (+)
LOC120546641 NA coding downstream 247265 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 283603 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 344460 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 680396 36666081 ~ 36681833 (+)
LOC120546644 NA coding downstream 739665 36725350 ~ 36746137 (+)
G189845 NA non-coding upstream 10982 35879484 ~ 35880060 (+)
G189830 NA non-coding upstream 67182 35816753 ~ 35823860 (+)
G189827 NA non-coding upstream 68830 35816159 ~ 35822212 (+)
G189829 NA non-coding upstream 70663 35808826 ~ 35820379 (+)
G189831 NA non-coding upstream 73951 35797610 ~ 35817091 (+)
G189860 NA non-coding downstream 28329 36014014 ~ 36017327 (+)
G189869 NA non-coding downstream 70848 36056533 ~ 36087702 (+)
LOC120546684 NA non-coding downstream 136420 36122105 ~ 36133095 (+)
LOC120546689 NA non-coding downstream 139089 36124774 ~ 36127996 (+)
LOC120546691 NA non-coding downstream 174833 36160518 ~ 36165136 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other upstream 13101 35697127 ~ 35877941 (+)
LOC120546462 NA other upstream 358059 35526848 ~ 35532983 (+)
G189770 NA other upstream 576005 35241255 ~ 35315037 (+)
G189769 NA other upstream 591064 35249741 ~ 35299978 (+)
G189723 NA other upstream 724654 35158223 ~ 35166388 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 228196 36213881 ~ 36214599 (+)
G189897 NA other downstream 246980 36232665 ~ 36375834 (+)
LOC120546466 NA other downstream 397223 36382908 ~ 36445635 (+)
G189944 NA other downstream 550994 36536679 ~ 36541312 (+)
xrcc3 NA other downstream 666493 36652178 ~ 36664382 (+)

Expression


Co-expression Network