G189830


Basic Information

Item Value
gene id G189830
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35816753 ~ 35823860 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257348
cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctttgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257348 True 256 lncRNA 0.50 2 35816753 35823860

Neighbor

gene id symbol gene type direction distance location
ccr6a NA coding upstream 413484 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 470823 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 623488 35187916 ~ 35193265 (+)
allc allc coding upstream 875422 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 889590 34905991 ~ 34927163 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 19902 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 409090 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 445428 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 506285 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 842221 36666081 ~ 36681833 (+)
G189801 NA non-coding upstream 28774 35599114 ~ 35787979 (+)
G189809 NA non-coding upstream 146057 35665194 ~ 35670696 (+)
G189793 LOC105912973,LOC105900140,LOC105893089 non-coding upstream 246951 35530461 ~ 35569802 (+)
G189785 NA non-coding upstream 258712 35438961 ~ 35558041 (+)
G189826 NA non-coding downstream 42648 35866508 ~ 35914703 (+)
G189845 NA non-coding downstream 55624 35879484 ~ 35880060 (+)
G189821 NA non-coding downstream 67182 35891042 ~ 35985685 (+)
G189857 NA non-coding downstream 131197 35955057 ~ 36018166 (+)
G189860 NA non-coding downstream 190154 36014014 ~ 36017327 (+)
LOC120546462 NA other upstream 283770 35526848 ~ 35532983 (+)
G189770 NA other upstream 501716 35241255 ~ 35315037 (+)
G189769 NA other upstream 516775 35249741 ~ 35299978 (+)
G189723 NA other upstream 650365 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 669325 35145489 ~ 35147428 (+)
zbtb25 zbtb25 other downstream 88636 35912496 ~ 35917525 (+)
G189858 NA other downstream 157958 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 390021 36213881 ~ 36214599 (+)
G189897 NA other downstream 408805 36232665 ~ 36375834 (+)
LOC120546466 NA other downstream 559048 36382908 ~ 36445635 (+)

Expression


Co-expression Network