LOC120546696


Basic Information

Item Value
gene id LOC120546696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36843890 ~ 36865869 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257656
CGGCCATGCTACCTCGCGGGTCATTTTCCCTCCCGAAATTACCGTTTTTTCGGACCAAACGGAGACGCTGCCCGCTGGACCTGTGGACACAGAAACGGAGACGTTTCAGGTAGATCTACaaaaGAACACAGAGGACACGGAGCCAGGAGACAACCTCTCCGAAGGGTCCAGTCTGAACAGCGCAGAGCGTCTGGATTTGCAGCAGCTTAC
>XR_005636924.1
CTAACGGCCATGCTACCTCGCGGGTCATTTTCCCTCCCGAAATTACCGTTTTTTCGGACCAAACGGAGACGCTGCCCGCTGGACCTGTGGACACAGAAACGGAGACGTTTCAGGTAGATCTACaaaaGAACACAGAGGACACGGAGCCAGGAGACAACCTCTCCGAAGGGTCCAGTCTGAACAGCGCAGAGCGTCTGGATTTGCAGCAGCTTACAAAGCCATCGGACATATTTCAGGATTTTACTCGTCATTGATACCTCAAAAACTCGTGCCTCAGTAAAGCAGAAAACTCGATCAAACAACTGTACTGCCTGATTGTTTACTGTAGTGTTATGCTGTTTTTTATGTGCATCTCCTTAAATTGTCATTCATGC

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism
ko04726 Serotonergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU257656 False 210 lncRNA 0.55 3 36843894 36865709
XR_005636924.1 True 374 lncRNA 0.47 3 36843890 36865869

Neighbor

gene id symbol gene type direction distance location
ubr7 LOC100699512 coding upstream 18483 36797195 ~ 36825407 (+)
tmem251 NA coding upstream 50403 36790619 ~ 36793487 (+)
LOC120546642 NA coding upstream 69842 36757884 ~ 36774048 (+)
LOC120546644 NA coding upstream 97753 36725350 ~ 36746137 (+)
LOC120546651 NA coding upstream 162057 36666081 ~ 36681833 (+)
G190005 NA non-coding upstream 9480 36834110 ~ 36834410 (+)
LOC120546682 NA non-coding upstream 12296 36826681 ~ 36831594 (+)
G190000 NA non-coding upstream 17606 36826076 ~ 36826284 (+)
G189978 NA non-coding upstream 68331 36706881 ~ 36775559 (+)
G189943 NA non-coding downstream 84359 36950228 ~ 36950678 (+)
G190030 NA non-coding downstream 104988 36970857 ~ 36971118 (+)
xrcc3 NA other upstream 179508 36652178 ~ 36664382 (+)
G189944 NA other upstream 302578 36536679 ~ 36541312 (+)
LOC120546466 NA other upstream 398255 36382908 ~ 36445635 (+)
G189897 NA other upstream 468056 36232665 ~ 36375834 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other upstream 629291 36213881 ~ 36214599 (+)
LOC120546470 cdc42bpb other downstream 4691 36870560 ~ 36950069 (+)

Expression


Co-expression Network