slc30a2 (slc30a3,LOC102796772)


Basic Information

Item Value
gene id slc30a2
gene name slc30a3,LOC102796772
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29196169 ~ 29220727 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780911.1
CATGCGTCTCAGTGTTCGAGGCTATAGCCCATAGGCTACTAACTCCAACCGAATTAAAAACCTCCCTCGGAAAAGTCCGCATGtgatttcctcctcctcctcctcctcctgccctCTCGACAAACTCTGCAATGAAGGAATGTATCCGTTTGTTCTGAAGTCGCACTGCTCACAGAAGAAACGTGGTCTCGGCTGACTTTTCCCCGCGTCGAGTGAACATCAGGGAACCGGACCTGCCGATTCTTCCTGGGGCAACTCCTGCAGCATCCTCCtccagaaaaaagaagaaaaaaaaagaaaaaaagaagcccAAACACCTTTTACTTCTTTTTCGTTTGTTAAATCTCACACGGGACAGCGACTGAGCGCATGCAGGCCGACTAAATGGATAATAACGCTGCGAATTCGGAGAAATCTCAACTGATACACGAGAAGAGTGCCAAAATGTATTCTCTAAAACTACAAAGCTCCTTCCCAGACTCCAAAGAGCAATATCCCGACTTCCCTCTCAAGAATGGAGGCATGGCCGGTGCCATCGAGCTGAAGCGACCCGTCGGTGCCCACTGCCACGGCGCCAAAGCCCCGGCGTGTGACGTGAGCGGGGACAGGCTGCTGGCCAAGAGGAAGCTCTGCATCGCTTCGGCCGTGTGCCTCGTCTTCATGATTGGCGAGGTCATAGGAGGCTACCTGGCCCACAGCCTGGCCATCATGACTGACGCAGCCCACCTCCTGACGGATTTTGGCAGCATGATGGTGAGCCTGTTCTCCCTGTGGATCTCCTCCAGACAGCCCACCAAAACCATGAACTTTGGTTGGCACAGATCAGAGATCCTGGGGGCATTCATCTCAGTCATTTCCATCTGGATCGTTACGGGGGCGCTGGTCTATTTAGCCATTGAGAGGATCGTACGCAACGACTACGAGATTGATGGCCATGTAATGTTGGTCACCTCCGGGTGTGCCGTCATCGTCAATATAATCATGGCCTACATCCTCCATCATTCCACCACCTTCCACGCCCACGGCAGCGGCTACCACCAGATAGACGAGGGAGGCCAGAGCCCCGTCGCCCACGGCCACTCCCACACGCTCCTTGGTGGCCACAGCAACACGAGCGTCCGCGCCGCCTTCATCCACGTGCTGGGAGACCTGCTGCAGAGCGTCGGCGTCATGGTGGCAGCGATCATCATCTACTTTCGGCCCGAGTATAAAGTTGCAGATCCCATCTGCACGTTCCTGTTCTCCGTCTTTGTCCTCTGCACCACCGTCACCATCCTCAGAGACGTCTTCAGGATACTCATGGAAGGTTCTCCTAAAGGAATCGAGTTTAACTCGGTGAAGGAGGTGCTGCTGTCGGTGAAGGCTGTGAAGTCTATGCACTCTCTGCACCTCTGGGCCTTGACTCTGGGCCAGGCACTGGTCTCGGTTCACCTGGCCATAGAGGAGGGTGCCGACGCTCAGTCTGTGCTGCAGGAGGCCACCGATCTGCTCAACACCAAGTTTGGTTTCCACAGCATCACCATCCAGGTGGAGCTCTACTCTGAAGACATGAGCCACTGCTCCCACTGCCAGGACCCCAGTGACTGATACGGGACCAGACTGGACCCAACATCCAGGAACATAGAGCGGGCTCAGGCATTGTTTTTGCATTCTCTCTGGGTGAGCTGGAGCAGTGAGAGCTGCACTCACAATGCACCTTCCTGTTAAAGGAGCCAAAAGCGTTTTATGGTAAATTTGTTGTGTTCGTCATTATGTCACAAGACCGCGAAATCATCCATGTGTTGGTAGTAGAGTGCGGATGCTGGAGCTCCATGCTAATGTGGAACTAATCTTGCAGTCCTCCCGTAAAGTTCCTTAAAAAATGGCATGCCAGTCCTCAAGGTTGCATGGAGCTTTTACCACATACTGGGACAGGTGCTGGCTTGCAAAGAAATCTATCAAGAATAAAAGATAAGAAGTAAGAGAACAAGAGTCCTAATGgataacagttttttttctaaaatgtcagCCTGTCCTAAAAAAATTATACAACAGAGCCATATAACCTCCCTCCATCTCACCTCATTGACATCTGAAATTTTGAGCCCAAACACAAAATCGCAATACAGTACTCAAAGATATATGTAACATTTTTCCGCACTTAGAAATGTCTAAAACGACTAAACCCATGCTATGAATTTTGTTGTGTACTTGCATTatccaaatgtttccaacaatgttcaaacccaaAGAAACCTGTCGTTTTATTTGAGGCAATGCTCCGTTACAGTTGGTCGCCTGTCGCTGGCGTCAAATCCCCTTTGTGCATGCGTCAGCGTTGTGGCCGTCTGCCAGAAGCTGTCATGAATTGACCTTTTATCCCATTTTGAGCCACATTTTTAAGATATAGTTTTTAGATCTTGGTGATCTATTTTAACTGGATGACAGATTTTAGTCATCGGACATCTGGATCTTAAGTAATTAGAGAAAACAAGCTGAGCAAACGTCAGCGGAAGCTCGGCTCGCAGCCCCTTTCGCAGACGAGCCGAACAGCATTGGAGAAACAGTATTTTAAAGCAAAACTGCTTTATCCAGTTTTTTTACTAGGGATataccgaatccagattttttgggtttggccgaataccgaatccacttgTTAAGAGtctgccgaatccgaaaccAAATACCGAATCCTATTCCCAGGGCTAGCAAAGCTGGTAATGGTCGTCTGGTTAACaaggactgtccttcctttgtcgtacctgaagttgctgcattctggctgttGTCTGTA

Function

symbol description
slc30a3 Predicted to enable zinc ion transmembrane transporter activity. Involved in regulation of sequestering of zinc ion. Located in late endosome and synaptic vesicle.

NR:

description
PREDICTED: zinc transporter 2-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K14690 SLC30A3, ZNT3; solute carrier family 30 (zinc transporter), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780911.1 True 2776 mRNA 0.50 8 29196169 29220727

Neighbor

gene id symbol gene type direction distance location
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 271406 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 289789 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 323566 28866213 ~ 28872603 (+)
plg plg coding upstream 409351 28773325 ~ 28786818 (+)
vgll2a vgll2,LOC102778318 coding upstream 447977 28741168 ~ 28748192 (+)
LOC120546480 NA coding downstream 95032 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 640647 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 656194 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 674698 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 791428 30012155 ~ 30022642 (+)
G188172 NA non-coding upstream 34276 29157305 ~ 29161893 (+)
G188168 NA non-coding upstream 52622 29138073 ~ 29143547 (+)
G188122 NA non-coding upstream 150623 29044283 ~ 29045546 (+)
G188104 NA non-coding upstream 212289 28983644 ~ 28983880 (+)
G188101 NA non-coding upstream 214545 28978955 ~ 28981624 (+)
G188206 clvs2,LOC101073081 non-coding downstream 163483 29384210 ~ 29384442 (+)
G188208 NA non-coding downstream 206698 29427425 ~ 29428647 (+)
G188177 smpdl3a non-coding downstream 222620 29443347 ~ 29447023 (+)
G188281 NA non-coding downstream 317448 29538175 ~ 29538452 (+)
G188288 NA non-coding downstream 355497 29576224 ~ 29578102 (+)
G188167 ucn other upstream 59252 29134171 ~ 29136917 (+)
trim54 trim54,LOC103375614 other upstream 63469 29110958 ~ 29132700 (+)
G188063 NA other upstream 304805 28886490 ~ 28891364 (+)
ttll2 ttll2 other upstream 313048 28872686 ~ 28883121 (+)
afdna afdn,LOC102779179 other upstream 547046 28539400 ~ 28649123 (+)
si:ch211-245h14.1 NA other downstream 71978 29292705 ~ 29312364 (+)
G188207 clvs2,LOC107675107 other downstream 198649 29419376 ~ 29420727 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other downstream 241122 29461849 ~ 29463874 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other downstream 424527 29645254 ~ 29645823 (+)
btbd9 btbd9 other downstream 863821 30084548 ~ 30097239 (+)

Expression


Co-expression Network