atad2b (atad2b)


Basic Information

Item Value
gene id atad2b
gene name atad2b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 13502644 ~ 13577416 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780953.1
agggggagggagggagagagagatagacagggaGAGAAATGGCGCCTCGATGCTGCGCTCACTGAGGCAGTGTTTGGAGCTGGCTAGGGAGATTCAGTAAGGGCagacaaaaggaaaaaacatgGTGAACACAAGGAAAAGCTCACGGTCGGGGAGCGGTCCCTTCATCTCCTCGAGGACTAGATCGTCGTCGAGAAACGAGCGAAACTCTGATGAACATAAAGAGCCCAGTAGTGATGTGAGCAGTCCAAGCAGTCCGCGGCTGGCTCCCCCTTCCAAGCGCATGCGGCGCCAGACTGCCTCCGAGCCCAGCTCCAGTGATACCTCCCCATCCCCTCAGACCAAGGGCCAGAGGGTCAGCTGGGAAATTCCCACCTACCACACCAGGTTGTCCTCTCGCATAATGCAAAATGGACACGCCCATATGAGTCACCGGAACGAAGAGAGTGGAGGGGGAGATCACTCTCGCATGAATGGCCATGTGGAGCTGAAGAGGAGCTGCCGGGTGAAGAAGAGCCAATTTGAACACCTCAATCAGAGCCTGCTGTTTGACCAGCTGGTCAACAGcactgCTGAGGCGGTCCTTCAGGAGATGGACAACATCAGCAGCATCAGGCAGAACCGTGAGGTGGAGCGACTTCGCATGTGGACTAGAGACACTGAGGAGgaaaacaTGGACATGTATTCTCGGGTGAAGCGCAGAAAATCCATGCGCAGGGGCACTTTCAGCATGCCCAcacaccacaaagtcatgagcAAGACGGagcaggaggatgaagaggaggaagggacGGAAGATTCTCAcggtgaggaagaggaggatgcaGAGGATGAAGACGACGAAGGGGATGAAGCAGAAGAGGCGGGAGAGGAAAATGACAGGCCGTACAATCTGAGGCAGCGGAAGACGGTGCAGAGATATGAGGCACCACCTATTGAGCCTGTGAATAGAAAACAGAGCAACCCCTCACTTTTTGACACGCACAGATCCCCAGCAAGAAGAAGCCATATAAGAGTGAAGAAACATGCCATTCACAGCAGTGACACCACCTCGTCTTCTGATGAAGAGCGTTTTGAGCGGAGGAAAAGCAAAAGCATGACCCGGGCCAGGAACAGATGTTTGCCCATGAACCTGGCGTCAGAAGACCTGGCTAGTGGGGTGCTGCGTGATCGGGTGAAAGTGGGTGCCAGCTTGGCTGATGTGGATCCCATGAACCTTGATAGCTCAGTGAAATTTGACAATGTGGGTGGCCTCAGTAATCACATTCAGTCACTAAAGGAGATGGTCGTGTTCCCACTGCTTTATCCTGAGATCTTTGAGAAGTTTAAGATTCAGCCTCCCAGAGGGTGTTTGTTCTACGGCCCCCCGGGGACAGGAAAGACCCTGGTAGCACGGGCGCTTGCCAACGAGTGTAGCCAGGGAGACAGAAAAGTTTCCTTCTTCATGAGGAAAGGAGCCGACTGCCTCAGCAAGTGGGTCGGCGAATCAGAACGCCAGCTACGCCTGCTCTTTGACCAGGCTTACCTGATGAGGCCATCCATCATTTTCTTTGATGAGATTGATGGTTTGGCTCCTGTTCGCTCCAGCAGGCAAGACCAGATACACAGTTCTATTGTGTCCACTCTGCTGGCCTTGATGGACGGCTTGGACAGTCGTGGGGAGATAGTGGTCATTGGTGCTACAAACAGACTTGACTCTATCGACCCAGCACTCAGGAGGCCTGGACGCTTTGACCGGGAGTTTCTGTTCAACCTGCCCGACAAGAAGGCCAGAAAGCACATCTTGGAGATTCACACACGGGACTGGAATCCCAAATTGGCTGAGCCATTTGTAGATGAACTTGCAGAAAAATGTGTCGGCTACTGCGGTGCTGACATCAAAGCACTTTGCACAGAGACAGCCTTGGCGGCGTTGCGCCGCCGCTACCCCCAGATCTATGGCAGCAGCGTCAAACTGAAGCTGGATGTCGGCTCCATCGTCCTGGGGCCCGGCGACTTCAGCAAGGCCATGAGGACAATCGTCCCTGCTTCCCAGAGGGCCCTGGCTCCCCCTGGCCGTGCCCTGTCCCCCACCCTCAGGCCCCTGCTGGCCAGCTCTTTCtccttgttgctgaaagctcTGCTCCGAGTCTTCCCCCACGCTCAGTGTACTGACAGGGACAACACACGCGGCTCCGACAATCAACCGCTTGAAGAGGACGTGTACAGTGATGATGACAATGAAGAACGCTCTGCTTCCATCTATGAAGTCCAGCCTGCTGCATGCCCAAAGAGTCAGCACCCCTCTTCTGCAACGCACAGACCCTTCCTCCATTTCTCCTCCTCTGCCCTCCAACAGCCGACAGCCTACCGGCCTCGTCTGTTGCTGACCGGGCCCCCGGGCTCAGGACAGAGTTCCCACTTGGCCCCTGCCTTGCTGCACCACCTGGACAAGCTGCCAGTGCACCTCCTGGATTTGCCCACTCTCTACTCCGTCAGCGCTAAGACGCCAGAGGAGTCCTGTGCTCAGGTTTTCCGCGAGGCCCGCCGGAGCGTGCCCAGTGTGGTGTTCATGCCACATATCTCAGAGTGGTGGGAGATAGTGAGTGACACTGTGAAGAGCACCTTCCTCACCCTGCTGCACGATGTGCCCTCTTTCAGCCCTGTCCTTATCCTCGCCACTGCTGAGACCCACTACTCCCAGCTGTCGGACGAGGTGAGAAGTATTTTCCAGAGGACCTACGGGGAGGTAGTGACGCTGTGCCCTCCAGGAGCAGAGGACAGGAGGAGCTTCTTCGCCGACCTGCTGTTGGTCCAAGCGGCCAGGGCTCTGCCACGCTTCAGGAATAAGGAAAGGCGTGAAGAGGTACTGCCGATGGCCGAGGCTCCAGGCCCCCGAGTCCTGTCGGCAGAGGAACAGCGCCGCCTGGCTGAGCAGGAGGAGAACACACTACGAGAGCTCAGGCTCTTTCTCAGGGACGTGACCAAGCGCCTGGCCACTGACAAACGCTTCAACATCTTCAGCAAGCCAGTTGACATTGAGGAGGTGTCCGACTACCTGGAGGTTATTCGGCAGCCTATGGACCTGTCCACTGTCATGACCAAGATTGACACCCTCCAGTACCTGACAGTGAAGGACTTCCTCATGGACATCGATCTCATCTGCAGTAATGCGTTAGAATACAACCCTGACAAGGATCCCGGAGACAAGGTGATCAGGCACCGAGCATGCAGTTTAAAGGACACAGCCCATGCTATATTTGCTGCCGAGCTGGACCCCGAGTTCGACCGCATGTGTGAAGAGATCAAGGAGGCACGCAGGAAGAGGGACCCCCAGGCGCCAGCTCAGCTGACGGCGCTGATGGGCGCCGTGGCAACCAGAAAGCACCACACCGCAGGAGAGGAGCAGGCCAGGAGCAGCACTCAGGGCGAGGCCACGGACAAACGGTGCACCACTAATCACATAAAGCGGAAGATTCGCCGGCGACCATCTTGGGGGCGGGGCATCATCCGTAAGAAGAAGGTCTACAGGAAGGAaatggaagaagaagaggaggaggaggaggaggagggggaggagggggaggaggaggagggggcggAGGTGGAAGCTGCAGGGCCCAGTGACTCATGTGTGACACAAGATGAGGAATCCTCATCTTGTGACATCATGGGTCCCCAGCCCAATGGCCACCACCCCCACGTCCcctccacagaggaggagagctCTAACGAGCCCCCTGTTGCAGCTCCAGCAGAACCTCCAGATGCCAGTAAAGCCCAAGAAGAGCCAACACCTAAGGAGGAGGAGCCCACAGCCAAAGAGGCAGAGCCTGAGAACACAGAGAAATACAATGAGCTGTTTTGGCTTGATGGCAGTACTCAGCCCATGGCTGACGGGGATGGCCAGGCCAGGCAGGCTGACTTCCAGCCTTTGATTGAAATGTCCGAGTCTTTAGATGCTGAGGTCCAGCCTAAGCACACAGAGGGTCTCCTAGTATCACAAGCGGACTGTGTGAATGGAAATGCGTCAATGGACAGCCTGGACTCGCAGAGCCTCAAAAGCAGCAGTGAGGCTGAGAAAAGGACTCCCCAGAGCCCGGCTGAAGGCTCTAATGAACCAGAACAGGAAGAgcacaaagacaaaaatgaGAGCAATCCAACTCAGGAGCCCCCTCCCCAGGATGGCAGGGCAACAACAGAACATGTTGAGGAAGATCAAGATACAGAAGGAGGTTCCACAGCCAAGACATGCAAGGTGAGCCTGTCAGAGCAGCTGAAGGGATCTGCTGAATGGACAGAGGAAGAGCCACAACCAGTCCCTCCCCATCCTCCCTTAGTGGTTGACCACCAGCGACTTTCGGCTCTCCTGGATATGGTGGTGAAGAAGAGTGAGGGCTACAGTGTGGAGCAGCTGGAGAGACTGTACTCCCTCCTCAGCCAGTGTATCTACCAGCACCGCAGAGAGTACGAAAAGACCCAGCTACTGGAGGAGATGGAGGAGCGAATCCAGCATTTCGATACATTCCTGTGAGAATACCTAATCAGGTAGATCCTGAACAGCCTGGgaccacaaagacacacaaactgagtgagagagagagagagagcgagagagagggaaggagctTCTGAGTCCAGCCCtcaccacaaaaacacacacacacaaaaaaaaaaatatccagcCCCCTTTTCTTGCTGAGAAGGGGACACAACGAGGACGACGTTGAGGACAGAGACATTCAATGGTGCTATCGTCTCAGGAACCTGGCCAGATCCAGACCCATTCTACACAACCAAACTCCTGGAGGTGTGTCAGTCACACACttacgcgcgcgcgcgcgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctaacggTGACGGGCAACCCTGGTGCTACTCGGGTGCTATCCTAACTTTTATCCACGCTGCTCTTGGGATTATTTCTTAACTTGGATGACTAGCAAAATCTAACAGATCGGGTGATGTCATATCGCAACCTGGCCGCTTCTCTCCGGAGCAGGCCGTGCATACACGCACCTTGACTCTTGGTTATGCATGTATTTCTACCAACCCACACCCagaaatatacacatacatacatacacacacacacacacacacacacacacccccagaTTCTTACCAGCAAAAGTGTGAATGCAGAGTGCCGCTAGGAGATGAGGACAGATGTTCTGAATCACTGAACCACATTGCTGAGCCCATCTTTCCCTCACGTTCGTCATAGGCCAGTTATTACCGTGCTATTATGCGGCTCATTTTATCTGCCACTTTAGCTCCATGCTTTTTATTCAATATCTGAGCCACCGTCAAGGATACTCACCCGGAACAATGGTTTACAACAAAGTTTTTAGCGTGAACACAAACTCGATGAGGTTAGCACAGCAGGACCAGAGCCCATGATGTCCTCTTCATTACAGCAGTCACCGGGTGTGGAGAGCTGTTAGCCCCCCCCTCAGCGGTTGTGTCCGAGTTACTGGTGAACGAGCGGCGCAGCGCGTGACTGTAGGTCAGTTGTACAACCACTACGCTCACAGACCACCTCTGGCGTTCAGTCTTAGCAGATTGTCACGTCCTAAATCGTTTGTGGTAGCTAACCCCTCCCCTCCTCACTACATTCACAGTCTGAATGTTTTCCCTCCCCACTCAAGCTGTGCTCGccagtagatttttttttttttctcctaaagACACCCCAGCGGAGGAACTGGAAGCAGTACAAATTTGAATGCGTGTAGAGTTTGCACTGCCTAGTGTGTGCCTTATTTCAAACCTCAAATGAAACGCTGATATATATATTCAGCaggattttttatttactaCTTGTGACAATGAACAGGCTCCAAGTTGGGGTGGGCCCTAACCACTGAGGTCACGGTTACCTTAaagcaaaatatatatacagtatatatatatatatgtgtatatatataaatttaatTTTAACCTTAGACATACCTAGGTTATCTCCAACCTGGGCCAAAAAAACTAATTGACGATAAAAGGTGTTCTATACAGATAATACTTACCCTGTGTGGCTGTGTCAGTGTTGTGGCCAGATGCATCTCAAGCACTCgaaatgttttgatttttaaatcTATCCATGCCCCGTTAAAACCCAGACCTGTTGGGGGAGGTCAGCCTCCACCTGAGCAGACAGCAGGTGTATGAAGAGGTTGACGACACCAgcttttcttcacttttcccATATATGCAAAACCAGAACATTATCATGCGAGTCAAACGATTTACCATGCCAAGTGTTATCCCACTCCCTAATAAAAAGGTGCTGACATGACGGTGCCCGTTCACAGGAATTCTGTTTCAGCTATGAAAATGTTCTATTAGACGGTCATAACAACCTATCTGTTATGTTGTGAATTTGCTAATTATTTTGTAcgggttgtttttttgttgttgttttttctttgtacacaaatgctttgctTGAGTTGATATTTTGCATGGGTTGTGAATCCATAATGAACAAGGCCATTCTAGGCAGTGCCCGTCACTAAGGTGTGTAAAGCATTACAtgatttctctttttcttttcttctcctcctttttttaaaattttttttataaatgagtGTATCGACTTTATGGATTTATTTCATCTGTTTTTCTCAACGCAAGACAAGAGAAGCTGGATTCTCATCTGAGGCCGACACAGTGAAGTTTTCTGACTGCAGTAAATAAAGGGGTTTACTGAAGCTTTATGACGTTTTCATGGCATTGTCATGGTTTTGGAGATGCCATATTTTGAGCTAGTTTGTACTGGATAAGgtgtctcctcctcccccttccCCCTTCACTCTTGTCCAATCCTCAACCAACCTCTTGGTGCAACTCTGACCCCAGCTCACCTCTGCCTTTTCTCAGATTCTCGGTGATAAAAGCAAAGACCATATGCAAACTGGCAACAACAGGTTAGCACTTGGACTACTGCAGAGAGAAAAACCAACGCTACCTCagcttaatttattttaatgcgAAAACTGTTTACTGGGTACAAAAacgctatttttttttcttttcttttttctcccccGAAATACTGTTGCAACATCTACAGTACCATCCGAGGTACCAGATCAGTGAAACCACAGCTGCCACAGTAATCCAAGAGTTGTTTATATCTCTCCGATTGTtctgtatgtttgtatttgaGCCAGATGATGATTGCATACGTTTTAAGCATATTTCATGGATTGTATATTTAATGCTTACGTTTCAGGTTCTTCTTAATTTCTACAGTACCTAGTTCTGCTCCTCTTTCATGTTATCACCCCCACACTTTCTTAGAAGCTACGGAGAGCATTTTCTGCCTATTTTACACAACCATCGccttcattattatttttttttgcagattttcATCTCATGATTcagattatttattattaaacatgttttacacCTAATTTTCAGTCAATTGTCTTTTTGTACGTTTTTGAAATTTAACAAATCGGGAAGCGTTGCACGTCCGTTTTAACAATTTAGCTGAATTGCGTAGCGTTTGTGtagcagttttatttttattttatttttttggcgtGTACGGGGGAATAAAGGGTTTACAGGTCTCTCAGGTTCAACACGCGACAACATGCCCTTTCaactttttctatttatttcaaTGTTCTGGTGTTTTCTGTGTTAAAGCGGTTACAGTTTGTGGCATACTGGAAGAGACTAACATAAGGACAGAACTGATATTTAAAAAGTAGTGTCTAGTACATCCCAGAAAGAGAAACAGGACCAGATGTTGTTCACTTTGTCTCCACTTTCTGCCAAAAgagttattttttatgaatttagaaacgcatatgaaaataaaatatgggTAGTTAAATGTCATACATTGTGATCTTCCTTTCTTATTATAAATTGTAGCCAGTTTGGACTAACAACCAATTTTTGTCTGGTAGTTGAGACTACTTAGTCCAGTATGCAGAGGGAAAGGGTTTGTTCTATCCTGAATTACTTTGTTCGTCCCCATTTCTTTCACACTTAATTTAGTCAAGAGTTTCCATAGCTTTGTcaattctgtttgtttgtgtatttaacACACCTGTTCGCAATGGTTACTTTAGTGTAAGTTATATTTGAAATGAAACCTTTACTGTATTTCTCAAACTGCTGTGATATACTTGAATAAAAAAGGTGCAAACTGTA

Function

symbol description
atad2b Predicted to enable ATP hydrolysis activity; chromatin binding activity; and histone binding activity. Predicted to be involved in negative regulation of chromatin silencing and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ATAD2B (ATPase family AAA domain containing 2B).

NR:

description
PREDICTED: ATPase family AAA domain-containing protein 2B, partial

GO: NA

KEGG:

id description
K22531 ATAD2; ATPase family AAA domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780953.1 True 8256 mRNA 0.49 29 13502644 13577416

Neighbor

gene id symbol gene type direction distance location
opn8b NA coding upstream 70873 13421308 ~ 13431771 (+)
opn8a NA coding upstream 89832 13388815 ~ 13412812 (+)
clic5b clic5,LOC104958973,LOC107378135,LOC106964163,LOC103355727 coding upstream 253489 13229966 ~ 13249155 (+)
enpp5 enpp5 coding upstream 274166 13221106 ~ 13228478 (+)
irak1bp1 NA coding upstream 361123 13139981 ~ 13141521 (+)
gzf1 gzf1 coding downstream 293471 13870887 ~ 13875635 (+)
chgb chgb coding downstream 356417 13933833 ~ 13938559 (+)
LOC120547093 tpd52l1 coding downstream 412065 13989481 ~ 13990079 (+)
LOC120546405 plcb4 coding downstream 567169 14144585 ~ 14229227 (+)
LOC120546497 NA coding downstream 654862 14232278 ~ 14234991 (+)
G184085 fkbp1b,LOC102794993 non-coding upstream 34557 13458602 ~ 13468087 (+)
G184078 mut non-coding upstream 53545 13443043 ~ 13449099 (+)
G184075 NA non-coding upstream 68140 13434212 ~ 13434504 (+)
G184074 NA non-coding upstream 68438 13433985 ~ 13434206 (+)
G184071 NA non-coding upstream 87074 13415240 ~ 13415570 (+)
G184128 NA non-coding downstream 311885 13889301 ~ 13890916 (+)
LOC120547176 NA non-coding downstream 374969 13952385 ~ 13988656 (+)
G184235 NA non-coding downstream 792708 14370124 ~ 14370768 (+)
G184249 LOC101061969 non-coding downstream 899208 14476624 ~ 14565127 (+)
G184263 NA non-coding downstream 981126 14558542 ~ 14606665 (+)
LOC120546706 wdcp other upstream 28485 13468235 ~ 13474159 (+)
G183994 phip other upstream 255228 13145475 ~ 13247416 (+)
LOC120546167 NA other upstream 494233 12946999 ~ 13008411 (+)
bcl11bb LOC103368061 other upstream 763260 12707218 ~ 12739384 (+)
ches1 foxn3 other upstream 1633452 11764143 ~ 11869192 (+)
LOC120546742 plcb1 other downstream 447068 14024484 ~ 14140769 (+)
G184231 NA other downstream 784925 14362341 ~ 14381187 (+)
LOC120546619 LOC103359912,LOC102080314 other downstream 816024 14393440 ~ 14424864 (+)
G184258 NA other downstream 947720 14525136 ~ 14529370 (+)
hsp90aa1.1 LOC103369948 other downstream 1552060 15129476 ~ 15134860 (+)

Expression


Co-expression Network