LOC120546186 (kcnh5,LOC103364987)


Basic Information

Item Value
gene id LOC120546186
gene name kcnh5,LOC103364987
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18798257 ~ 18813714 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039780959.1
CCCTCATAATGCATGGGGGCAAGAGAGGACTGGTGGCTCCGCAGAACACTTTTCTGGAAAATATTGTCCGGCGCTCCAGTGAAACCAGTTTCCTATTGGGAAATGCTCAGATCTTGGAGTGGCCTGTTGTTTACAGCAATGATGGATTCTGCAAGCTGTCTGGATACCACAGAGCTGAAGTCATGCATAGGAGTAGCACGTGCAATTTCATGTATGGTGACCTGACTGATAAGAAGACTATAGAAAGAATCAGACAGACCTTTGATAACTATGAGTCCAATTTCTATGAGGTGCTGCTCTATACAAAGAATAGAACACCGATATGGCTCTACATGCAGGTAGCTCCAATCAGAAATGAGAACAACAAGGTGGTGCTTTTCCTCTGTACCTTCAGAGACATTACGCTTTTTAAACAGCCGATTGAAGATGAAACAACTAAAGGATGGACGAAGTTTGCCAGACTGACGCGGGCACTGACCAACAATCGCAACGTGGTGCAGCAGTTAGCACCACTGAGCAAGACTGAAGTCAGCCAACGGCCCTCCAGACTGGCTGAGGCTCTCCAGCTGGGATCGGACATCCTCCCTCAGTACAAACAGGAAGCCCCCAAGACTCCTCCACACATCATCCTCCACTACTGCACCTTCAAGACCACCTGGGACTGGATCATCCTCATCTTGACCTTCTACACCGCCATCATGGTGCCCTATAACGTCTCCTTTAAGACAAAGCAGAACAATTTGGCTTGGCTGGTGGTGGACAGCATCGTGGACGTGGTCTTCCTGATTGACATTGTGCTTAACTTCCACACCACCTTTGTGGGTCCCGCTGGGGAAGTAATTTCAGACGCAAAGCTCATACGAATGAATTACCTGAGGACGTGGTTCGTCATTGACCTGTTGTCCTGTCTGCCCTACGACATCATTAACGCCTTTGAACATGTAGATGAGGATGTCATCACATCTGCTTCTCGATCAAGCAATCTCCGTGAGTCTTCAATTTTCCACAGGAATACCACACGAACAGAAGATCATGTACTCCCAGGTCTCAGCAGCCTGTTCAGCTCCCTGAAAGTAATCCGCCTGCTCAGGTTGGGCCGGGTGGCCCGGAAGTTGGACCACTACCTGGAGTACGGAGCAGCCGTCCTGGTTCTGCTGGTGTGCGTTTTTGGTCTGGTGGCCCACTGGCTGGCCTGCATCTGGTACAGCATCGGGGACTACGAGGTCATCGATGAGACCACCAACACCATTAAGACAGACAGCTGGCTCTACCAGTTGGCTCTGAGCATCGGGACTCCTTACCGCTACAACGCCAGTGGTACAGGACAGTGGGAGGGGGGGCCCAACAAGGACACGCTGTACATTTCTTCCCTCTACTTCACCATGACGAGTCTCACCACCATCGGATTTGGCAACATCGCTCCGGCCACAGATGGAGAGAAGATTTTCTCTGTGGCTATGATGATGGTGGGCTCGCTGTTGTATGCAACCATCTTTGGAAACGTCACCACCATCTTCCAGCAGATGTACACCAACACAAACCGCTACCATGAGATGCTCAACAACGTGCGCGACTTCTTGCAGCTTTATCAGATTCCCAAAGGTCTGAGTGAGAGGGTCATGGACTTCATCGTCTCCACCTGGGCCATGTCTAAGGGCATTGACACAGATAagGTTCTATCAATTTGTCCTAAAGACATGCGAGCGGACATCTGCGTCCACCTCAACCGGCAGGTGTTCAACGACCACCCGGCGTTCCGTCTGGCGAGCGACGGCTGTCTGCGCTCTCTAGCTGTGGAGTTTCAGACGACACACTGTGCACCTGGAGACCTCATCTTCCATATCGGAGAGAGCGTCGACACCCTCTGCTTTGTCGTCTCCGGTTCACTAGAAGTCATCCAGGATGATGAGGTCATCGCAATACTAGGTAAAGGTGATGTGTTTGGAGACGTGTTCTGGAAAGAGACCACGCCGGCCCGGTCTTGTGCAAATGTCCGAGCTTTGACTTACTGCGACCTGCACGTCATTAGGAGAGACGCTCTGATGAGGGTGCTGGAGTTTTACACAGCGTTCGCCAACACGTTCTCCCGCAACCTCATTCTCACATGCAATCTACGAAAACGGGTAATCTTCAGAAAGATTGCAGATGTGAAGAAGGAGCAGGAGCGCCAGAGGAACGAGGTGACTCTCTCCATTCCTGAAGACCACCCAGTCCGCAAGCTGTTCCACAGGTTCAGACAGCAGAGAGACGCTCAAACACAGGGAGAGTCTCACACTTACTTTGATCATAACTGTGTGCAGGTGGAGCCGCAGCGCCACCATCACTCCGACTCAAACTCGTACACGCAGTGTCAGTCTGTATCTCCTCAGCAGCAGGAGTACAGCTCCACGCTGCAGAATAATGCACCGTGCACAGGAGGAGGGAATGCAGGCAGCGGCTGCAGCATGGCTGCACCTCCACAAGCATTTGTCCACACTGAGACGTCAGAGCAAAGCTGCACACAAGAGGCTGGGGAGTCTATAGCAAGGCCTTGTGCAGAGAGCCAGCTTTGTCAGAGGGTCAACAGCCCTGTTCAGAGCAGCGGTGCGGGCGGAGAGGGAGCTGTAGGTGGCGTTACCAGCAGCAGAGGTGCTCGAGGCTGGGCAAAGTTTAGAAACGCCGCTTctgctccaccaccaccaccacctcctgcTGACGAGCCAGAAAAGGAGCCACAGACAGCAGAAGAGTGGCAGAAAGAATCCCAGTCCTCAGAACAGTTGGCAGCCGCCAATAAGAACCAGGATTCAGAGGAAAGTGGAGAGACAGGGAGCACAGAGGGGGGCAACGGTGCTGGAGAGGCAGGTGACGAAAGTGCCATGCACAAAACTGACTCCTGTGACAGTGGTATCACAAAGAGCGATCTACGCATCGACCGAGCCGGAGAGTCAAGAAGCTCCTTTGAAAGAAGCCCGATGGAGAAGAGCCCGATGGAGAGAAACCCGTTTGAGCACGGTCTGGGGGCGGACTCCCTCAAACAGTCGTTTGTTCAGCCGTCTGAACAAACGCTCCTTCAAGCCACCCTGCTTGAGGCCAAGCTGGAGCTGAAGGGAGACATTCAGAATCTGAGCGGCCGCCTGTCGGTCCTTGAGTCTCAGGTAAACGAGATCCTCAGGCTCCTGTCGATAAAAAGAAGACTGTCTCTGCCACCGACTTCTTCCCCCAAGGCCAGAGTGAGAAATCAAGACTCAGTCGCTGCCTCCAAGCTGGTCACACCGAAACCAGACGATGGGCCTTTTTGAATTTACTGATTTTAAAACCCACAACCTGGTTGCATGCAGAAACCCCTACTTACTGTTATCTAAGCACTACAAAAACCCAGGGATTTTTCTAATAGTCTTTGACTTATGAGGCACTTTTAAGATCCTTTGTATACTATATTTGAGAATGCCAAACAGAAACAGTAACAATTATTgaacaaacaattaaaaaacactttttgtgCTGTTATTGCTAGGTAATTAGTACATTTTAGAAGCATTATAAACAGTGTAGAGCTACGTATTGGATACTCTGATGAAGGCTTTTGTTGAAACATCTGAGCCTGATAGGAGCTGAGGTCACATACATattcaaaacatattttgaGTTTAGGCCTTTTTGTAGAGCTGTCATTTTCATAATCTTCctggacttttttttcttaatgttaATTTACAGTTTTTGGCAGAACACTTGACCAAAGGGATAAAAGTGAGAGGGTTCACCTGCCATAACTTTCATAATAATTTAAACAACTTTGACTTGCTCATACAGCGTGTTAGAGAGCAAACTCATCTTAGACTTTTATCATCTGAACAGACTGGAGCTCAGTAAACGTTTCCACATGCACCATGTATGTTAAATAAATGTCTCCCCTTAGTTATTAATTGTCAGGTAATAATATGTGCCTTACAATAATAAAGCCTCATTCAGGATTGTTTTGATGAGACATAATCAAAAATCTTTACTGTTTTTGCGCACATGTTTTATAATAGAAATGATAACCCTGTTTGTGTTATACCCCTTTTTGGAGGATAATGGGTGGATTTTCTCATTTGAATCTGTCACTGCACTAAGCATTCTTAACAGTTTagaaactatttaaattgtgttTGAGCTTTATTCCCTTTTATGTGAAATAGGAATGCAATAATGGTGgtttaataatatattttttgttgttacttaTCATTATCtcagttttcttttaaaatatttattttccttaAACAAGATAGAGAATATTTCAATATGAAATTACAGCACACTTACTGTACATTCCCTCCTGTAACTATACGTCTTGCTCAGGTGTATTTGCTCTAACGTTGAATTTCAGTATTTATTTCAGTATGAATGAATTTTTATCTTTGTCTACTTGTAAGATTATATAGTTATGCAAATCATGTTTTTGGATTGCAGAAGATTTTAAATGATGGGTTATTGTACACATCGCTATGTAACTCTAAAAGAACCAGAACGGTACATGGTGatgcaaatatttgcatttCTTCATTCTGTTTGGACAAGAATAATTTACATTAACAAACAGCATGGTTACAGTTTTAGTTCATGATGTTTTCTAATATTCTGTGGGACTGCGAATCATGTTAGTATGAACTGTGAGGATGTAAGCATGTAGCTATTAGTTGATTCAGTGCATCTATTTTAAATAAGATGCATGAATGACATTGCATGCATACAGGGAACCTGTCAACAGTGAAATGAATAATGAAAACTGATTCCTGCTCGCCATCTGGTGTTTAGTCTCCTCTGTTATGCAACAAAAGTAAGTCTTaggccctgaacacccacacaggtgtttataGTGAAAGGGGCGCTGTGCAGTTTGgcaatttcttcgctgttttcgcTTTTTCCTCACAGGTTTTTCTATaaagctccccctacagcttcggaatagatattt

Function

symbol description
kcnh5 Predicted to enable voltage-gated potassium channel activity. Acts upstream of or within regulation of G2/M transition of mitotic cell cycle. Located in cell surface.

NR:

description
PREDICTED: potassium voltage-gated channel subfamily H member 5

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0018106 peptidyl-histidine phosphorylation biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0023014 signal transduction by protein phosphorylation biological_process
GO:0000160 phosphorelay signal transduction system biological_process
GO:0016021 integral component of membrane cellular_component
GO:0000155 phosphorelay sensor kinase activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04908 KCNH5, KV10.2; potassium voltage-gated channel Eag-related subfamily H member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039780959.1 True 4948 mRNA 0.46 12 18798257 18813714

Neighbor

gene id symbol gene type direction distance location
LOC120546187 acss1,LOC100712210,LOC102211118,LOC102308435,LOC101486165,LOC103364973 coding upstream 19155 18761417 ~ 18779102 (+)
LOC120547336 LOC104951086,LOC103372628 coding upstream 37369 18754893 ~ 18760888 (+)
eif2b2 eif2b2 coding upstream 60566 18733328 ~ 18737691 (+)
tmed10 tmed10 coding upstream 75271 18717023 ~ 18722986 (+)
fosab LOC104951064,LOC103372631,LOC100709203 coding upstream 100153 18695655 ~ 18698104 (+)
LOC120546190 l3hypdh coding downstream 895 18814609 ~ 18818443 (+)
trnae-cuc_27 NA coding downstream 118602 18932316 ~ 18932387 (+)
gata4 gata4,LOC102782453 coding downstream 134606 18948320 ~ 18958802 (+)
fdft1 fdft1 coding downstream 152492 18966206 ~ 18977451 (+)
ctsbb ctsb,LOC104947341 coding downstream 164116 18977830 ~ 18981178 (+)
G185471 NA non-coding upstream 93023 18703965 ~ 18705234 (+)
LOC120546607 NA non-coding upstream 108224 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 153103 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 157876 18636374 ~ 18640381 (+)
LOC120546827 NA non-coding upstream 334229 18443952 ~ 18464028 (+)
G185495 daam1,LOC108240128 non-coding downstream 5370 18819084 ~ 18821146 (+)
G185589 NA non-coding downstream 201012 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 208982 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 210550 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 229510 19043224 ~ 19043548 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 86263 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 163205 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 657997 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 743331 18020956 ~ 18054926 (+)
G185237 NA other upstream 881009 17916853 ~ 17917248 (+)
LOC120546624 prox1 other downstream 390440 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 540902 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 554006 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 615881 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 758859 19572573 ~ 19620783 (+)

Expression


Co-expression Network