armc1l (LOC103368599,LOC104950028,LOC108242485)


Basic Information

Item Value
gene id armc1l
gene name LOC103368599,LOC104950028,LOC108242485
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17375197 ~ 17378628 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781015.1
GCGTTAGCTTCTTTAGCTAGCCACAACGTTAACGCTAGCGCTacgacttgacttgacttgacatgacaatgtttaccagctagctaacgttaactccGTACCTTGATGTTCCTATCTTAAAACATACATTAGTGACCGTAACGTGGCTTAAATCATCCATTGAGTTACATTAACGTTAGTTAAATGCATAGCGTTAGCTAGACTAACgttataacgttaacgttagctagctagctagctagctagctatataaaCAGGTCTGGTAACTAAAAGGTAACAAAGATGATGGATGCACTGTCGGTGGTGCGTCAGCTGCGGGACCTGGCCTCTGAGCCGCAGAACCGAGAGGTGATAGTGCAGGACCAGGGCTGTCTCCCCGGGCTGGTTCTCTTCTTGGACCACCAGAACCCAGACGTGCTACTCGCAACTCTTCAGACCCTGCGCTACTTGGCTGAGTTGTCTCCCAACATCTCCACCATGAAGAATGAACTGGGTATGATGGTGAGCTTGGAGAATCTAACTGGGAGGGAGGGCCTGTCTATTGACATCACAGCCTTGGCCAAGGAGGTGTTTGACATTCTGAGTGCACCTGCTAATCTTACGCGCACGcctgagagggagaggagaaagaaatcCCAGTTTTTTATCAACTCCACCAACAAGAAGGCCAAGTCTGTAACTCTGCACATCCAGGGGCTGGATAGCACTGACACGCGAGGCTTGTGTGAGGAGGCTCTTCTGAAGGTCAGAGGAGTGATCAGCTTCACCTTCCAGATGGCTTCCAAGAGATGCACCGTCCGCATCCGCTCAGACCTGCCCACTGagAGTCTGGCATCAGCCATCGCTGCCACTAAGGTGTTGTCAGCCCAGCAGGTGGTGAAGAATGAGGCAGGAGAAGACGTTTTCATCCCTCTGAACCCATGTGGAGGGGAAGTGCAGCAAAACTCAGCTCTACCAGACTACCTCccagaagaagaggagagccCAGAGAAGGAGGTCGACCGAGCGGTTTCCCGCACCACAGCTAAGCAAGATTCTAATGGAAGCTGGCTCAACGCCGCCGCCGGTTTCCTCACCAAAACTTTCTACTGGTGAAACTGGCGCAGTTTAATTCCCTGAGATCCAGTGATGTAAAGTTGTGCTAAAAGACTAACTGCTGTGTGTTTTGAATGAGTGGACATTACTGGATGTTAGCACACCAAAGGCCTACATCCTGGCGTTGTGTGCATGGTCTGAACTTCACCAACTTGCCATCAGTTCTCAGAAAAACTACACATTGTCAATTCACAAGCACTTCGGATTTTTGCTTTATTATGGTTATCTGGTTACTAATGGATGATCACACACTTGAAAAATATCTTGTCTCTGGACTTGCATAATGCTGTTTTCTATCCAGTATTCtcattaaatgtaaatattttcttaATCTGTCAAACTGTCCATTTTCTCCTgacatgtaaaaagaaaaaaaaaaaagactttgttGCTACTTTTCTACA

Function

NR:

description
PREDICTED: armadillo repeat-containing protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781015.1 True 1500 mRNA 0.47 8 17375197 17378628

Neighbor

gene id symbol gene type direction distance location
iyd iyd coding downstream 64750 17307112 ~ 17310447 (-)
sec63 sec63 coding downstream 68971 17291166 ~ 17306226 (-)
scml4 LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495 coding downstream 87556 17269861 ~ 17287641 (-)
lratd1 fam84a coding downstream 194486 17178364 ~ 17180711 (-)
ddx1 ddx1 coding downstream 409830 16956248 ~ 16965367 (-)
myb myb coding upstream 87290 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 278026 17656654 ~ 17657876 (-)
LOC120547287 NA coding upstream 318810 17697438 ~ 17701407 (-)
rps12 rps12 coding upstream 382242 17760870 ~ 17763808 (-)
LOC120547356 NA coding upstream 383328 17761956 ~ 17762038 (-)
G185039 map7,LOC107374525 non-coding downstream 12294 17362009 ~ 17362903 (-)
G185031 ppp1r14c non-coding downstream 42224 17312485 ~ 17332973 (-)
G184989 NA non-coding downstream 204935 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 439016 16933693 ~ 16936181 (-)
G184903 NA non-coding downstream 550600 16824296 ~ 16824597 (-)
G185054 NA non-coding upstream 17843 17396471 ~ 17399451 (-)
G185035 NA non-coding upstream 47576 17426204 ~ 17432964 (-)
LOC120546280 NA non-coding upstream 140143 17518771 ~ 17521010 (-)
G185094 NA non-coding upstream 146890 17525518 ~ 17527365 (-)
G185123 sgk1 non-coding upstream 187041 17565669 ~ 17578288 (-)
LOC120547341 NA other downstream 105563 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 539214 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 857323 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1186867 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1306888 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 244496 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 386177 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 532642 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1111187 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1261793 18640421 ~ 18647401 (-)

Expression


Co-expression Network