kcnk13b (kcnk13,LOC106526329)


Basic Information

Item Value
gene id kcnk13b
gene name kcnk13,LOC106526329
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11659994 ~ 11673089 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781106.1
TGGACGCGTTTTGGATTAACGGTTTAGACTTGGACTGCACATAGAAGCTTCgtgagcaacaacaacaaaaaaaaaatgccaaatcCACAGCCTTGGGAGAACTCGATCATAACCTGCCTGAACAACAATTTGCTTATAATGCGCAGGACTTTTCTGtcgtaaaaaactaaaaatcttGTCAACGTTTATTTTGCCCGAGGACTgtgcgtttttttatttttattattattattattttatttttttggtattCGAGGCTAACCATGCCACAGGTCCCTCGCTGCAGCTTCACAACGGGGACAATAACAGCAACATAATGGCATGTAGGagcggctgctgctgcggcTCCGGTCCCATAAACGAGGATAACGCGAGGTTTCTGTTGCTGGCGTTGTTCATCGTCATTTACCTCCTGTGTGGGGCCGCAGTCTTCTCCGCGCTGGAGCAGCCCAAGGAGCGCGAGGCCAACGAGCGCTGGGCGCAGAGGTTCGAGCAGTTCAGCCACAAGTACAACCTGAGTAAGAAAGACCTGAATAACTTCCTCAGGAACTACGAGGAGGCGAACGTGGCGGGCATCCGCGTGGACACGATCAGACCTCGGTGGGACTTCACCGGCGCTTTTTACTTCGTGGGAACTGTGGTGTCAACCATTGGGTTTGGGATGACCACTCCTGCCACCATTGGAGGAAAAGTCTTCCTGATGTTCTACGGCCTGCTCGGCTGCGCGGCCACCATCCTCTTCTTCAACCTCTTTCTGGAGCGCGTCATCACCGTCATCGCCGTCGTCCTCAAGTCCTGTCACCAGCGACGCCACAACAAAGCTGTGCTCGCACCGAATGGCCGGCAGGTCTCGGAGGGGAACAGAGCAGGCGAAGTTGGAGGAAGTGGTGGGGGGAAAGGGGAAGATCTGGCCGGCTGGAAGCCTTCGGTCTACTGCGTCATGCTCATTCTGGGAGCGGCGGCCATCTTGGTGTCCTGCTGCGCCTCGCTCATGTACTCGGCGGCCGAGGGCTGGGGCTACCTGGACTCGCTCTACTTCTGCTTCGTGGCCTTCAGCACCATCGGCTTCGGCGACATGGTGAGCAGCCAGCGGGCCGTCTACGAGGGCCACGCCACGGTCGCGTATCGCCTGGGCAACTTCTTCTTCATCCTCACCGGCGTCTGCTGCATCTACTCCCTCTTCAACATCATCTCCATCGTCATCAAGCAGGTCCTCAACTGGCTGCTGAGGAGGCTGGAGGCCCCCTGCCGCTGCTGTTTCCCCAGGAGGGGTCATCACCCGCACCGGCACCCGCGGCGGAACGTGGTGGCCCCGGGCCACCTGCGCGCCCGCAGGGACCCCTCCATCGAGACAGACGCCATCAATGAGAGCGAGACTGACAATGGGCGCAGGATGTCTGGGGAGATGATCTCCATGAGGGACTTCCTGGCCGCCAACAAGGTGAATCTGGCAATTATGCAGAAGCAGCTTTCAGAGATGGCCATCGGGCACCCGCGCCAGTCCAGCTCCAATTCACGTCAGAACGGATTCTCAGGAGGGGTGGGCGCCCTTGGCATCATGAACAACCGGCTGGCAGAGACGAGCGTGGACAGATAGGGGAAACAGCGTGAATCCTTTTTTCAAAGGATACAAAAGGCTGAGGGGATAAGTCGAGTATGGACAAATTGACACTGAGCCCTTCCTTCCTTAAAAAGGGAAGACTTGCTTGGTGTACCAAGACAAAACGTACGACTGCATAATTCATCTATTCCATTGAGACCCCCCAGCAGCTACCACCTCAGCCCATCTTCCTGTCAAGAACATGGCTGCATAAATGATGCGTGATGGTTTGCTGGAGTCTCACATCTGGACTAGGCTCAGTGTGCCGGAATGTTCCCCTGTGAGGAACTCAGTTTCCatggtgataaaaaaaaaaccctgcctAGAGCCCCTGTATCTAAGCCTTAAAACATGATATGATGCACTACATGCTAATTCACATCTAACCGCAACTTCCACTACTTTACAATACTCAATATGACTCTAACCACGTCCATACTGTGGCAGGCATAGAAATAGCTTCATTAAAATGGGTGTTTGGTGTCTAACAGTGGttattaggcctacattaagcTGGGTGTCATGTAGCAACGATGAGCCCAATTcatggatgaatgaatgttgACCTTTAATTCAAAAATGACTCAATTATGGTATTGATACTATCAATGGCACTCTATTCACATCATTTGTGACCATATGTTTCACAGCCATATGCCATTCAATAGCCTCCATCCTGGCACTGCTTTCATTCATTATCACGAAAGAATAGAagacaaaccccccccccctaaagACCTCATTACAAACCAAACAGACCTATGCCTAGCTGAATGGGAAGTGTTCGGAGTCTGAGAtgaaaccgttttttttttttttttttaagagactGCTGTTTTTACTGCTG

Function

symbol description
kcnk13 Predicted to enable potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: potassium channel subfamily K member 13

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
K04922 KCNK13, K2P13.1; potassium channel subfamily K member 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781106.1 True 2447 mRNA 0.52 3 11659994 11673089

Neighbor

gene id symbol gene type direction distance location
LOC120547092 psmc1 coding downstream 9934 11638846 ~ 11650060 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding downstream 25664 11619704 ~ 11634330 (-)
LOC120546403 NA coding downstream 83937 11575473 ~ 11576057 (-)
LOC120547228 LOC104952422,LOC104931204 coding downstream 111644 11546186 ~ 11548350 (-)
glrx5 glrx5 coding downstream 931469 10724470 ~ 10728525 (-)
tshr tshr coding upstream 220445 11893534 ~ 11918141 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding upstream 354459 12027548 ~ 12358231 (-)
trnat-ugu_2 NA coding upstream 910080 12583169 ~ 12583241 (-)
ccnk ccnk coding upstream 1022848 12695937 ~ 12703184 (-)
LOC120546273 NA coding upstream 1073297 12746386 ~ 12747738 (-)
G183734 NA non-coding downstream 421 11659054 ~ 11659573 (-)
G183732 NA non-coding downstream 1032 11658438 ~ 11658962 (-)
G183720 brms1l,LOC103358934 non-coding downstream 69434 11586036 ~ 11590560 (-)
G183685 NA non-coding downstream 115929 11540514 ~ 11544065 (-)
G183682 NA non-coding downstream 122543 11536271 ~ 11537451 (-)
G183747 NA non-coding upstream 25963 11699052 ~ 11699965 (-)
G183753 NA non-coding upstream 74042 11747131 ~ 11747593 (-)
G183781 NA non-coding upstream 114912 11788001 ~ 11788321 (-)
G183788 NA non-coding upstream 194072 11867161 ~ 11869156 (-)
G183792 NA non-coding upstream 211488 11884577 ~ 11886506 (-)
G183650 NA other downstream 285379 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 1049369 10455244 ~ 10610625 (-)
G183528 NA other downstream 1138584 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1558933 10099478 ~ 10101061 (-)
G183176 NA other downstream 2526522 9129573 ~ 9133472 (-)
ost4 NA other upstream 1234213 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 1287409 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1472375 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 1582796 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 1785513 13458602 ~ 13468065 (-)

Expression


Co-expression Network