Gene
RNA
| Item | Value |
|---|---|
| gene id | tcf21 |
| gene name | tcf21,LOC102777283 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 17652502 ~ 17654361 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| tcf21 | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; E-box binding activity; and protein dimerization activity. Acts upstream of or within artery development and branchiomeric skeletal muscle development. Located in nucleus. Is expressed in several structures, including mesenchymal cell; mesoderm; pericardial region; pharyngeal arch; and proepicardial cluster. Orthologous to human TCF21 (transcription factor 21). |
| description |
|---|
| transcription factor 21-like |
| id | name | namespace |
|---|---|---|
| GO:0046983 | protein dimerization activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039781107.1 | True | 1086 | mRNA | 0.49 | 2 | 17652502 | 17654361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc2a12 | slc2a12 | coding | upstream | 29390 | 17615329 ~ 17623112 (+) |
| sgk1 | sgk1 | coding | upstream | 56448 | 17560853 ~ 17596054 (+) |
| aldh8a1 | aldh8a1 | coding | upstream | 136919 | 17506954 ~ 17515583 (+) |
| hbs1l | hbs1l | coding | upstream | 147628 | 17480198 ~ 17504874 (+) |
| LOC120546616 | pde7b,LOC102780239 | coding | upstream | 222500 | 17407774 ~ 17430002 (+) |
| LOC120546414 | NA | coding | downstream | 17152 | 17671513 ~ 17686499 (+) |
| eya4 | eya4 | coding | downstream | 55438 | 17709799 ~ 17758414 (+) |
| lca5 | LOC104965141 | coding | downstream | 137492 | 17791853 ~ 17799948 (+) |
| fam167ab | fam167a,LOC102799533 | coding | downstream | 145729 | 17800090 ~ 17808692 (+) |
| mtmr9 | mtmr9 | coding | downstream | 234280 | 17888641 ~ 17904513 (+) |
| G185112 | NA | non-coding | upstream | 98593 | 17553442 ~ 17553909 (+) |
| G185107 | NA | non-coding | upstream | 101397 | 17550558 ~ 17551105 (+) |
| G185103 | NA | non-coding | upstream | 104213 | 17535854 ~ 17548289 (+) |
| G185067 | NA | non-coding | upstream | 182927 | 17468552 ~ 17469575 (+) |
| LOC120546214 | NA | non-coding | upstream | 199440 | 17449530 ~ 17453062 (+) |
| LOC120546942 | NA | non-coding | downstream | 14805 | 17669166 ~ 17671477 (+) |
| LOC120546941 | NA | non-coding | downstream | 32335 | 17686696 ~ 17688280 (+) |
| G185155 | rps12 | non-coding | downstream | 106315 | 17760676 ~ 17763736 (+) |
| G185156 | NA | non-coding | downstream | 109608 | 17763969 ~ 17764792 (+) |
| G185254 | NA | non-coding | downstream | 403050 | 18057411 ~ 18059367 (+) |
| map7b | map7,LOC107374525 | other | upstream | 277443 | 17341837 ~ 17375059 (+) |
| G184996 | sec63 | other | upstream | 356801 | 17293654 ~ 17295701 (+) |
| G184859 | NA | other | upstream | 819188 | 16825694 ~ 16833314 (+) |
| si:ch211-57i17.1 | LOC103363786 | other | upstream | 872567 | 16765545 ~ 16779935 (+) |
| vegfab | vegfa | other | upstream | 966423 | 16671586 ~ 16686079 (+) |
| G185145 | LOC108242497,LOC106926748,LOC106945794 | other | downstream | 14811 | 17669172 ~ 17686398 (+) |
| LOC120546940 | NA | other | downstream | 20032 | 17674393 ~ 17693634 (+) |
| G185237 | NA | other | downstream | 262492 | 17916853 ~ 17917248 (+) |
| fndc4a | fndc4,LOC107589087,LOC107723530,LOC106923250 | other | downstream | 366595 | 18020956 ~ 18054926 (+) |
| znf513a | znf513,LOC102795572 | other | downstream | 472770 | 18127131 ~ 18140260 (+) |
