LOC120546273


Basic Information

Item Value
gene id LOC120546273
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12746386 ~ 12747738 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781112.1
CAGGATCACAGTGGTACCTGAGCTGTTTATTCAACATGATGGCTGTTTGGTGTACTGCTGGGACTTTGCTCCTTGTTTTGCTGACTGGTTTGAGTTACAGCTACCCTATGCAGCAAGTTTCTGCTGGCTCTAACTGGATGGTTCCTTTTGGTGGATTTGCCCCTTCTGGTTCTTGGTCTGCCTCTCAAACTGTCTCAAATCCAGCTCAGTCCAACTATTTTGTTGCACCTCCAGGATATGCTCAAGGCTCCTCTGCAGACCCTGCCTCTAAACAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCATTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACTATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGCTTCGAGCAAGGCAACTCCGAATCTGAGAGCGAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCTCCTATCCTTACCCTTCCTATGACTACATGTTCCTGAATGGCCAGTATCCTCCAGGCACATATACTTACACCAGCAACAGCCTTGAGCAGGGGAGGGACAGCAGGGAGGATGCTCACTACACAAGGGACAACTATCCCAGCACTCAGCAGACCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATGGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACAAGGTTCTTACTCACAGCCGGGCCGACACCGCCGGGGAGCGCCGAGAACACTCATGCAAAAGGTTGGCTACCAGGTGAATCTGTAAAGAGCTGTCAATAAAATCTTAACCTGTACATTT
>XM_039781113.1
CAGGATCACAGTGGTACCTGAGCTGTTTATTCAACATGATGGCTGTTTGGTGTACTGCTGGGACTTTGCTCCTTGTTTTGCTGACTGGTTTGAGTTACAGCTACCCTATGCAGCAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCATTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACTATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGCTTCGAGCAAGGCAACTCCGAATCTGAGAGCGAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCTCCTATCCTTACCCTTCCTATGACTACATGTTCCTGAATGGCCAGTATCCTCCAGGCACATATACTTACACCAGCAACAGCCTTGAGCAGGGGAGGGACAGCAGGGAGGATGCTCACTACACAAGGGACAACTATCCCAGCACTCAGCAGACCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATGGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACAAGGTTCTTACTCACAGCCGGGCCGACACCGCCGGGGAGCGCCGAGAACACTCATGCAAAAGGTTGGCTACCAGGTGAATCTGTAAAGAGCTGTCAATAAAATCTTAACCTGTACATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781112.1 True 962 mRNA 0.52 5 12746386 12747738
XM_039781113.1 False 803 mRNA 0.52 4 12746386 12747738

Neighbor

gene id symbol gene type direction distance location
ccnk ccnk coding downstream 43202 12695937 ~ 12703184 (-)
trnat-ugu_2 NA coding downstream 163145 12583169 ~ 12583241 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding downstream 388155 12027548 ~ 12358231 (-)
tshr tshr coding downstream 828245 11893534 ~ 11918141 (-)
kcnk13b kcnk13,LOC106526329 coding downstream 1073297 11659994 ~ 11673089 (-)
LOC120547205 NA coding upstream 199220 12946958 ~ 12948322 (-)
LOC120547206 NA coding upstream 208735 12956473 ~ 12957811 (-)
LOC120547207 NA coding upstream 230925 12978663 ~ 12979999 (-)
LOC120547210 NA coding upstream 242837 12990575 ~ 12991921 (-)
LOC120546166 LOC103355735,LOC104963358,LOC100702431,LOC102289960,LOC108231778 coding upstream 250351 12998089 ~ 13015227 (-)
G183910 NA non-coding downstream 115594 12588138 ~ 12630792 (-)
G183908 NA non-coding downstream 119680 12592618 ~ 12626706 (-)
G183898 NA non-coding downstream 186611 12540583 ~ 12559775 (-)
G183875 snw1,LOC102781075 non-coding downstream 224632 12518372 ~ 12521754 (-)
G183872 NA non-coding downstream 241371 12504685 ~ 12505015 (-)
G183952 NA non-coding upstream 93294 12841032 ~ 12922807 (-)
LOC120546274 NA non-coding upstream 136632 12884370 ~ 12885775 (-)
G183981 NA non-coding upstream 286514 13034252 ~ 13034497 (-)
G184026 NA non-coding upstream 501853 13249591 ~ 13250436 (-)
G184049 NA non-coding upstream 570750 13318488 ~ 13318930 (-)
G183650 NA other downstream 1371771 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 2135761 10455244 ~ 10610625 (-)
G183528 NA other downstream 2224976 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 2645325 10099478 ~ 10101061 (-)
G183176 NA other downstream 3612914 9129573 ~ 9133472 (-)
ost4 NA other upstream 159564 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 212760 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 397726 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 508147 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 710864 13458602 ~ 13468065 (-)

Expression


Co-expression Network