LOC120546291


Basic Information

Item Value
gene id LOC120546291
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 629191 ~ 652352 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781139.1
GTAGTTGATATTTCCGCCGGTTTGACCGTGTGTTGTTAGCAGAGTGAACCGTTAGCTGGAACTGCATAACTGCAGAAAAAACAAACCGTCAAGAGTTTAGTTCAGTAAGCGGAGAGAGGCGGACCGAACCCGGATACTGCTGCTGCCGGTTAGAACCGGAAATGAAGTCGAGAACAACAACAGatgttgagcagctgttggtggttaaagaagaggttcccccGGAACAGCAGGAGTGTAgttccagtgtggaccagcaggagccaaagccccccccacacattaaagaggaacaggaggaactgtggagcagtcaggagggagagcagcttcaagggctggaggaggctgatatcaccaagttcccattcactcctgtccctgtgaagagtgaacatgatgaagaggaagatgttcagcagctgttggtggttaaagaagaAGTCGAGGAGCCGGAGGAAACAGAAACCGTCGGCGACTCGAACAGAGCTCCACATCTCCACCCTGAACCCGACAACAACAAGTCCAACTCTTCAGACGGCGACCGTGCAGAGTCTCCGTCGCTTTTAAACTCGTTGCAGATTCTCCGAGTCCCCGCCGGCGATGCCAGACACAAAACCGGCAGGAAAAAGAAGACGTATCGCTGCTCCGAGTGTGGGAAAGTTTTCGGCCGCAGCCCGCATCTGAAGATCCACATGAggactcacacaggagagaaaccctTCAGCTGCCCCGTCTGCGCCAAGAGCTTCACGCAGAAGGTGAATCTGACGTACCACATGTCGGTGCACACGGGGGAGAAACGCTTCAGCTGCCGCATCTGCGGCGAGAGATTCACGTGGTACACGCAGCTCAAGAGTCACCGCTGCCTCTGCGAGCGCCCGAGTCGGAGAGACGAGAccagagaggcagagagcagcgggaacagagaggcagagggcAGCGGCGAGAAGCCGTTCGTCTGCGGCCGGTGCGGGAAAACGTTCAGCCGCAAAGACAACCTGAACATCCACACGAggatccacacaggagagagaccGTTCAGCTGCTCCGTCTGCGCCAAGAGCTTCAAACACGGAGGACACCTGACGCAGCACATGTCCGTCCACAGGAAGGAGAACCGCTTCGGCTGCCGTGACTGCCGCCGGAGATTCACCTGGCGCTACCAGCTGCAGAGACACACCTGTGGCGGAGAATCCTCTCTGCGTGTAGACGAGGAAGAGGAAGCTCTGTCCTCACAGCTTCAccagagacaaactcaacacatggaacaGATCTGTAGTACTCGCCGTTACAaagctgatggagaggaccgtggaggaccagaaccagccaggaactcgcATCCACcattacaaccagagactgaagaccagactggagactcttcagAGTTGAACATTAAGGTTGAACTCAGCGACGAGGACGAGGGCAGAGGACCTCACTCAGgtTCCAACTACGACGCAGGAAGTACCGGCGGCCGGAAGTCGTTCCGCTGCTCCGACTGCGGGAAGACGTTCGGCCGAAAGGAACATCTGCAAACCCACGCTCGGATCCACACGGGCGAGCGGCCGTTTGGCTGCTCCGTCTGCGGCAAAACCTTCGGCTGCAAGCGCTCGCTGCTGGGTCACATGACCAGCCACACGGGGGACAAGCCCTTCGGCTGCTCGCAGTGCGGGAAACGCTTCGGCCGCTTGGTGAACCTGAAGACGCACGAGAGGCTGCACACGGGCGAGCGGCCGTTTAGCTGCCCGTTCTGCGGGAAAGGCTTCACGCAGAAGGTTCACATGACTCAGCACACGGCCGTGCACACGGGCCAGAAACAGTTCTGTTGCAGCGTCTGCGGAAAACAGTTCACCTGGCTTTCCGGGTTCAGGCGACACAAGTGCGGCGGCGAGGCGGAGAGCCAGACAGAGGCGAACTCGGAGGAGAACTCGGAGGCGGAGCCGGGCGAGAAACGGTTCCGCTGCCGGCAgtgcggcagcaaatttaaccACAAACACAACTTGAAGGcgcacatgagaatccacacggGAGAGAAGCCGTTCGGCTGCTCCGTCTGTGCCAAAGGCTTCGCGGCGAGCGGCGCTCTGAAGAAACACCTGCGGACGCATTCGGGGGAGAAGCCGTTCGGCTGCGCGGTGTGCGGCGCACGCTTCACTCAGGGCGGGAACCTGAAGCGGCACATGGCCCAGCACGCCGGGGACACGCGGCCGAAACCGTTCGGCTGCACCATCTGCGGTAAAAAGTTCACACAAGTGTCGAACATGAAGCGACACACGGCGCAGCACGCCGCCgcacaaacaggaagtgaagtcGCTGAGCAGTTCAGATCTTACCCAGGAagaaacaagctgtaatgtaaccctacaggacaaatgttcagcatcagtcagCGTCCATTAAAAGTTCTGGTTTTggcgctgacagactcagaagtgtctgacaacattatgggatggatccctacagagatagagcttttagtaaaagagtaagatccttttagtttaacatgagaCTGTCCCAAAACCACCATCACCaatcccaccagactccatgtaaataatcaggacttttatcaccgtaaaacacacttcattcaaagtggacag
>XM_039781140.1
GTAGTTGATATTTCCGCCGGTTTGACCGTGTGTTGTTAGCAGAGTGAACCGTTAGCTGGAACTGCATAACTGCAGAAAAAACAAACCGTCAAGAGTTTAGTTCAGTAAGCGGAGAGAGGCGGACCGAACCCGGATACTGCTGCTGCCGGTTAGAACCGGAAATGAAGTCGAGAACAACAACAGatgttgagcagctgttggtggttaaagaagaggttcccccGGAACAGCAGGAGTGTAgttccagtgtggaccagcaggagccaaagccccccccacacattaaagaggaacaggaggaactgtggagcagtcaggagggagagcagcttcaagggctggaggaggctgatatcaccaagttcccattcactcctgtccctgtgaagagtgaacatgatgaagaggaagatgttcagcagctgttggtggttaaagaagaAGTCGAGGAGCCGGAGGAAACAGAAACCGTCGGCGACTCGAACAGAGCTCCACATCTCCACCCTGAACCCGACAACAACAAGTCCAACTCTTCAGACGGCGACCGTGCAGAGTCTCCGTCGCTTTTAAACTCGTTGCAGATTCTCCGAGTCCCCGCCGGCGATGCCAGACACAAAACCGGCAGGAAAAAGAAGACGTATCGCTGCTCCGAGTGTGGGAAAGTTTTCGGCCGCAGCCCGCATCTGAAGATCCACATGAggactcacacaggagagaaaccctTCAGCTGCCCCGTCTGCGCCAAGAGCTTCACGCAGAAGGTGAATCTGACGTACCACATGTCGGTGCACACGGGGGAGAAACGCTTCAGCTGCCGCATCTGCGGCGAGAGATTCACGTGGTACACGCAGCTCAAGAGTCACCGCTGCCTCTGCGAGCGCCCGAGTCGGAGAGACGAGAccagagaggcagagagcagcgggaacagagaggcagagggcAGCGGCGAGAAGCCGTTCGTCTGCGGCCGGTGCGGGAAAACGTTCAGCCGCAAAGACAACCTGAACATCCACACGAggatccacacaggagagagaccGTTCAGCTGCTCCGTCTGCGCCAAGAGCTTCAAACACGGAGGACACCTGACGCAGCACATGTCCGTCCACAGGAAGGAGAACCGCTTCGGCTGCCGTGACTGCCGCCGGAGATTCACCTGGCGCTACCAGCTGCAGAGACACACCTGTGGCGGAGAATCCTCTCTGCGTGTAGACGAGGAAGAGGAAGCTCTGTCCTCACAGCTTCAccagagacaaactcaacacatggaaacagaagctgatggagaggaccgtggaggaccagaaccagccaggaactcgcATCCACcattacaaccagagactgaagaccagactggagactcttcagAGTTGAACATTAAGGTTGAACTCAGCGACGAGGACGAGGGCAGAGGACCTCACTCAGgtTCCAACTACGACGCAGGAAGTACCGGCGGCCGGAAGTCGTTCCGCTGCTCCGACTGCGGGAAGACGTTCGGCCGAAAGGAACATCTGCAAACCCACGCTCGGATCCACACGGGCGAGCGGCCGTTTGGCTGCTCCGTCTGCGGCAAAACCTTCGGCTGCAAGCGCTCGCTGCTGGGTCACATGACCAGCCACACGGGGGACAAGCCCTTCGGCTGCTCGCAGTGCGGGAAACGCTTCGGCCGCTTGGTGAACCTGAAGACGCACGAGAGGCTGCACACGGGCGAGCGGCCGTTTAGCTGCCCGTTCTGCGGGAAAGGCTTCACGCAGAAGGTTCACATGACTCAGCACACGGCCGTGCACACGGGCCAGAAACAGTTCTGTTGCAGCGTCTGCGGAAAACAGTTCACCTGGCTTTCCGGGTTCAGGCGACACAAGTGCGGCGGCGAGGCGGAGAGCCAGACAGAGGCGAACTCGGAGGAGAACTCGGAGGCGGAGCCGGGCGAGAAACGGTTCCGCTGCCGGCAgtgcggcagcaaatttaaccACAAACACAACTTGAAGGcgcacatgagaatccacacggGAGAGAAGCCGTTCGGCTGCTCCGTCTGTGCCAAAGGCTTCGCGGCGAGCGGCGCTCTGAAGAAACACCTGCGGACGCATTCGGGGGAGAAGCCGTTCGGCTGCGCGGTGTGCGGCGCACGCTTCACTCAGGGCGGGAACCTGAAGCGGCACATGGCCCAGCACGCCGGGGACACGCGGCCGAAACCGTTCGGCTGCACCATCTGCGGTAAAAAGTTCACACAAGTGTCGAACATGAAGCGACACACGGCGCAGCACGCCGCCgcacaaacaggaagtgaagtcGCTGAGCAGTTCAGATCTTACCCAGGAagaaacaagctgtaatgtaaccctacaggacaaatgttcagcatcagtcagCGTCCATTAAAAGTTCTGGTTTTggcgctgacagactcagaagtgtctgacaacattatgggatggatccctacagagatagagcttttagtaaaagagtaagatccttttagtttaacatgagaCTGTCCCAAAACCACCATCACCaatcccaccagactccatgtaaataatcaggacttttatcaccgtaaaacacacttcattcaaagtggacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781139.1 True 2615 mRNA 0.57 5 629191 652352
XM_039781140.1 False 2594 mRNA 0.57 5 629191 652352

Neighbor

gene id symbol gene type direction distance location
LOC120546300 NA coding downstream 3248 611228 ~ 625943 (-)
LOC120547160 NA coding downstream 18203 609658 ~ 610988 (-)
nus1 nus1 coding downstream 37358 578344 ~ 591833 (-)
slc35f1 slc35f1 coding downstream 57175 553340 ~ 572016 (-)
serinc1 serinc1,LOC104938560,LOC102778905 coding downstream 78598 535989 ~ 550593 (-)
LOC120547161 NA coding upstream 15512 667864 ~ 761905 (-)
LOC120546297 NA coding upstream 136419 788771 ~ 790942 (-)
trnad-guc_18 NA coding upstream 176111 828463 ~ 828534 (-)
trnad-guc_19 NA coding upstream 184822 837174 ~ 837245 (-)
trnad-guc_20 NA coding upstream 189602 841954 ~ 842025 (-)
G181292 NA non-coding downstream 1455 627284 ~ 627736 (-)
G181243 NA non-coding downstream 278482 350497 ~ 350709 (-)
G181233 NA non-coding downstream 409019 219778 ~ 220172 (-)
G181226 NA non-coding downstream 480691 148223 ~ 148500 (-)
G181223 NA non-coding downstream 488795 140190 ~ 140396 (-)
G181299 NA non-coding upstream 144 652496 ~ 652799 (-)
G181326 NA non-coding upstream 37873 690225 ~ 690483 (-)
G181330 NA non-coding upstream 70314 722666 ~ 722880 (-)
LOC120546304 NA non-coding upstream 74857 727209 ~ 729441 (-)
G181388 NA non-coding upstream 218305 870657 ~ 873449 (-)
G181206 NA other downstream 549881 57976 ~ 79310 (-)
G181196 NA other downstream 580438 47081 ~ 48753 (-)
G181860 NA other upstream 2723413 3375765 ~ 3376108 (-)
G181919 bach2 other upstream 2956495 3608847 ~ 3610329 (-)
srp9 srp9 other upstream 3239285 3891637 ~ 3893175 (-)
G182061 NA other upstream 3254265 3906617 ~ 3912279 (-)
G182059 NA other upstream 3256195 3908547 ~ 3914015 (-)

Expression


Co-expression Network