LOC120546308


Basic Information

Item Value
gene id LOC120546308
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 22212510 ~ 22221145 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781163.1
attaaCACAAATCACGAAAAGTAAACTGTTACAGGTTTTGTGGCGATAAAGacatattaaacaaaaaaataacgtACTTTAAGACCGACAATGTCTTGGAACCATGGCCTACCATTTTTACCAGGAAACACCTTTCGGGATGTTACGAAGTCAGCCTTCCATCGTCCCCAGACACTGGACTTTAAGAATGGCTATGCTTTCCGCCGTAAACCCACTGTGGGCATTGAACAGGATCTTCTTTTATCAGAGAAGTTGATCCAACAAGAGATCAGTGAGTTTTCCTTGACACCAGACGTCTCTTATGGTTCCTTTGAACAGAGCGTAGTAAAAGAATTCATCCCAGCCTATGTGGCCCTTGACAAGAAGGTGTTGTGCTACTATGCATACTTTCATGAAAATATCCCCTTTTCAGCTGAAGAGGAGTTCTGTGTGCGTCCCGTGGTAATTAACTACTATCTTGAGGATGACACAATGTCCATGGTCGAGCCCATGGTGGAGAATTCTGGGATGCCGCAGGGGAAACGGGTCAGTCGCCAGCGTCTGCCCAATAATGAACATGGACAGCATTACCAGTGGACAGACCTCAATATTGGCATGGACCTGGAGGTGCACGGAATCAAGTACCACATCACACATTGCGATGCTTTTACAAAGAAATTCTTGGAAAGTGAGGGCTTTGTTCTGAATGACCCTGAGCCGATGCCTCAGGCCAAACATCGCAAAAACCCTCAGCCTTCACAACCCTCAGCCTACACAACACCCTCCCAATTTGACAGCAGGTACCAGTTTCTTACCATGGATCCTAAGGTGCTGCGTTTCTTTGCCCTGTGGGAAGATGCTGACTCTCTGTTCGGGGACAACAGGCCTGTTACCATCCAGTATTACCTGGCGGACGACACAGTGGGGGTCAGCGCGGTCCGTGAACCCAACAGCGGACGCGATCCCTTCCCTATCCTGATGCACAGACTGAAGCTACCCAAGAAAATCAAACCAGGGTCTGAGACCTTTCCCAGCTGTGTGCTGGAGGCTTCAAAAGCGGAAGTAGATGAGTACTACTCCCCCAAAGACTTCCATGTGGGTCAGACGATAAAGCTGATGGGCCGTCGCTTCCTACTTTATGACTGTGATGGCTTCACTAAAGAGTATTACCAAAAGAACCATCCTGATATGGAGATGAAACCCTCAGGGGTACCAAAAAAGACTGACCTGCTTCAGGAGAGAAAGGAGGTTCCTCCCTATAATGGATTTGGTTCACTTGAAGACTCGCTCCAGAATTGTTTGTCTTTAATTCCTAAGACTCCCAAAAAGAATGTGCTAAAGATGCTGGAAAACCAACACAAAGTGTTGCGCTACAGTGCCAGACTGGACTCCCAGAATCACGCAGATGAGGACCGATGTTTCATACTGTCCTACTTCCCGTCCGATGACATGATCAGTATTTTTGAAAAGCCCGTCCCCGGTATCCTCGGTGGCCAGGTCCTGAAAAAGACACACGTCCCCAAGCCAGGCTCTACAGCGGACAAACCTGAGTTCTACTCACCTGCAGACTTCGCTATTGGAGCCACTGTGAAGGTTTTCAGCCGCCGCTTTGTGTTGACCAATGCTGACCACTTTGTGCTGACGTACCTGGAGTCCAGCACACGCCAGATCCCGTGTCAGACGCTGGATTCTTTGCGACAGAAGCTGGGTGTGGCAACTGCAAATAACCAGCCAGCTGACCAGAATGGTAAAAATCGAAACAGCCATCTAGTTGACAATGTAGCAGAGCCATCTTCATTATGTGAGGGAAGGCTGGATTGCCTCAAAAGTTATTCACTCCCCAATAAATCACagcaaaataaatcaaagtCCTTGCTGAATCTTTCGTAACAGAATAAACACTGGGCCTGCTGCAGAAAAGGtgatttgaaaaaagtgttttggcAAAAACTGACAGCTTCTCAACTGTTGTTGGTGAGATCGAGCTCAAAATACCTTTGGGCATTTACCAAGCGGTGGTCAAGGCCTACCctaaaatctgattggctacttCAAAAATACAAAGTTATGTTTGAGGCGGGCAatcaaatgtacattttaatcTAGAAaactatgttccctcagcaacataaaacaaacagaagACCAAACCAGGGACACTTTTAGCATGCTGTaattagcatttagctaaaaGCATAGGTGATGGGACTCCACCATGCTCAGTGCCACCCTCGGTTGAGTCCAGCTGCAGACACCCAATTCAGAATCACTTGAACACACTGTTTACTGTGTTATGAAAGAACATTGGAAATGTAGAAAATGTCTATGTAATTCTGCATGCATTTGTCTCTATTTACCAACTGGCAATGCATGAATTCTTCATtgctgcaaaataaaacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781163.1 True 2381 mRNA 0.46 10 22212510 22221145

Neighbor

gene id symbol gene type direction distance location
LOC120546953 eva1a coding upstream 1033 22132841 ~ 22211477 (+)
smek1 ppp4r3a,LOC102789800 coding upstream 250839 21947299 ~ 21961671 (+)
paplnb NA coding upstream 268428 21938478 ~ 21944082 (+)
LOC120547078 NA coding upstream 368954 21834478 ~ 21843556 (+)
LOC120547079 NA coding upstream 402836 21806015 ~ 21809674 (+)
LOC120546584 prep,LOC100698444,LOC102792678,LOC104927043 coding downstream 37452 22258597 ~ 22270747 (+)
LOC120546233 sim1,LOC103374615 coding downstream 217576 22438721 ~ 22450064 (+)
LOC120546368 mrap2 coding downstream 260775 22481920 ~ 22484901 (+)
LOC120546366 LOC104963849 coding downstream 267901 22489046 ~ 22515691 (+)
LOC120547088 LOC104956167 coding downstream 320261 22541406 ~ 22553765 (+)
LOC120547080 NA non-coding upstream 378728 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 465956 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 669729 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 737206 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 863929 21347944 ~ 21348581 (+)
G186452 NA non-coding downstream 73297 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 314514 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 495825 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 578590 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 625727 22846872 ~ 22847674 (+)
G186394 mycn,LOC108233328 other upstream 146921 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 265510 21944743 ~ 21947000 (+)
gtf2h5 gtf2h5 other upstream 1039871 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2352293 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2564354 19633500 ~ 19648156 (+)
lin28b lin28b other downstream 59822 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 586734 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 740888 22962033 ~ 22966010 (+)
dtl dtl other downstream 866675 23087820 ~ 23095505 (+)
ppp2r5a ppp2r5a other downstream 874767 23095912 ~ 23142640 (+)

Expression


Co-expression Network