hbs1l (hbs1l)


Basic Information

Item Value
gene id hbs1l
gene name hbs1l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17480198 ~ 17504874 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781168.1
AAAATCTTGTTTGAAagcaagtttttattttaatgactagCTATATTATTTAGCCTGCCCCGAGCTTGCCATCCagcaaaagacacaaaaaactTCGAAATTtgagacctttaaaaaaaaatctgatttatttgatttatttccGAGTCTGCTGAATCAAATCTGACCCAACGTTAACTTAGCTACTGCTGTCATTTCACACTAGCTACTGCAACAGCAATGGCAGTCGGGCAGTGAGACACATGTCAACAGTCTGTGAGCCGAAAAACATTTACGCTGGGGGCGAGAGAAGACACTTAGCAAAATGTCTCGGCACAGAAATGTTCGAGGTTACAACTACGATGAAGATTTCGACGATGATGACATTTATGGACATTCTGTAGATGACGACTGCTGTATATCACCAGCAACAGCAAATCAGTTTATCTACTCTCGTCAAGAGAGGCAAGCACCAAAAGAGGGGCCTTTAGAAGAGGAAGAATATGAAGATGATGTACCCATGTCCCCTACCATCAGCCACAACCTTGACCCTCTTGACCAAGCCAAGCTGTATTCCTGTCTGGACCATATGCGGACTGTTTTGGGAGATGCAGTGCCAGACTCAATCCTGACCCAGGCAGCCATAAAATGTGGATTCGACCCACAGAAGGCATTGGATGCAGTCCTGTCTGAAGACGCTAAGACAGCCCCAGTTACCAGAAGTACCAATGAAGAGACAGCTTCGGTAGCAAGAGTTAGCCAGGAGAAAGCACCGCTTCCACAAAGAACCAAACAAGCGGCCGTGGTTGAAAAAGCTAAAATAAGAGATGTGTCTCACAATAAACTGGACTCTGAAGTGGTACCCAAAGTGGCCCGTATGACAGTCTCTGGCAAGAAGCAGACCATGGGCTTTGATGTTCCCAGCACAGGGGAGAATGGCATTGTCACGGCTTCGGTACGCCGTGGTGGCAGCCCTGAAAACGCCACCGCAACCCCTCCCTCAGAGGCCACGCCCAAGCGCCCTGAGACTCCAGCTAAAGGGTCCAATGGAGACGAGCCCTCTACAGTTCCCACCCCAGGCCGCTCCTCTGGAAAGGCTCGGCAGTCGATCAATATCAAAGCTGAATTGGAGAAGAGGCAGGGGGGCAAACCTCTGTTAAATTTGGTTGTTATAGGTCATGTGGACGCGGGTAAAAGCACACTGATGGGCCACCTGCTTTATCTGCTGGGCAACGTCAACAAGCGCACCATGCACAAGTATGAGCAGGAATCGAAGAAGGCGGGAAAGGCCTCCTTCGCCTATGCTTGGGTCCTAGATGAAACTGGCGAGGAGAGGGACAGaggtgtgacGATGGATGTGGGCATGACCAAGTTTGAGACAAACTCTAAGGTGGTGACCCTGATGGATGCACCAGGACACAAAGACTTCATCCCCAACATGATCACAGGAGCTGCACAGGCCGACGTGGCGGTGCTGGTGGTGGACGCCAGCCGAGGAGAGTTTGAGGCAGGCTTCGAGGCGGGCGGTCAGACCAGAGAGCATGCCCTGTTGGTGCGTTCGCTTGGTGTCACTCAGCTGGCTGTAGCTGTCAACAAGATGGACCAGGTAAACTGGCAACAAGAGCGTTTCCAAGACATCATTACCAAACTTGGCCATTTTCTCAAGCAGGCAGGATTCAAGGAGTCTGATGTTTTCTACATCCCCAGCAGCGGTCTGTCAGGAGAGAACCTCACCACCAGGAGTACAGTGTCACAACTTATCTCTTGGTACTCTGGTCCCAGCCTGCTGGAGCAGATTGACGCCTTCAAAGCACCCCAGCGATCCGTAGACAAACCGTTCAGACTGTGTGTCTCCGATGTGTTCAAAGACCAGGGTTCAGGCTTCTGTGTTACAGGGAAGATCGAGGCTGGTTACATTCAGACCGGAGAGAGAATACTGGCTATGCCTCCCAATGAAACCTGCACTGTCAAAGGTATTACTCTACACGATGAAGCTCTGGACTGGGCTGCAGCAGGAGACCATGTCAGCCTGACAGTCACCGGCATGGACATCATCAAGATCAATGTGGGCTGTGTGTTCTGTGATCCAAAGGAGCCTATTCGAGTCTGTACTCGATTCAGAGCCCGAATCCTTCTCTTCAATATCGAGGTTCCCATAACAAAAGGCTTCCCAGTCTTGCTGCATTACCACACAGTCAGTGAGCCGGCCACCATTAGGAAACTGATCAGCGTTTTACACAAGAGCAGCGGCGAGGTCCTCAAGAAGAAACCAAAGTGCTTGAGTAAAGGCATGAATGCCATCGTGGAGATCCAGACCCAGAGGCCGGTGTCATTAGAGCTGTACAAGGACTTCAAGGAGCTGGGCCGCTTCATGCTCAGATATGTCGGCTCCACCATTGCTGCAGGGGTTGTCACTGAGATCAAAGAATGAAGAGCCTTTCCATCGACACCGAGCCAGTCAGACCTTACTCTGGAGACTGCATGCAGCCAGAGACAAAGTGCAATTCCTCTAGAGATTCCCCTTATGGACTCAGAGTGTCACATTCATCCAGCGACGTCTCCCATCTAGGGTCAACACTAACTGCACAGTTACAACGTGGCATGATGCTGAGCAGCCTCCTCCGGCAAACAGGAGCATTACCCAGCGCCCCTCCTCCACTTCAAATTTTCCCACCGTctgaccatttgttttttagtaCAACCTCTGTGCTCTAAATTCACTGTTTGATCAAGccaaaacaataatataatCCAACTCTGAAAGTCAATCTTACCACACTGAAATTTTAACAGTGATTAATGTCAATTTACTTTCCCTGAAGAAGCCATGGCTGATCATTTATCTTGACTTGAAAGAACCCTGGTGTAGCAACCAGTGCAGATAGTTTAACTGGAGCTGTTGACAAATCAGCTGTGGTGTAAGCATGACATTTGCTTTCTGGTGTATGGAGTCCACGTTTTTTCTGTTAAGATGAGGAATAACATCACAGCTTCACAGTATAATAAGGCTCTCCTAATCAAAACCGCTGACATGAAATAACTAATTTTAAATGACAGAAATGACGAATGAGATGTAATAACATGCGGGAGTTGAAAgcaacatttattatttttaccaTGAGCATGGAGACACTCTAACCAAGGTagtttgtaaaacaaaaagggAAACTTTCAAATGTTCCTCTCTGGATAAAGAGACATCACTCTCATTTATGTCAAACAAAAGTTACTTGAAATGCTTTAACAGTAAAGCACCAACGTGCTTTTTGAAGTgctcatctgtgttttttttttttctatcaaagactcagcgaggaggaggagggttgaaGGAGCTGTGTTTCTATTTTCTCCATGTGTTGGTGAAGGTAATGTGAAGGAAGACGATGCAAAATGAACTTGACATCAGTAATCTGTGGTTTGAGTTTTGATTTCAGCAGTTTGAAGAGTCTCCTTTTTAATCCAACTCATAAAAAGAATTCTCTAAATCCTTGTGACAGGTTTCTGGAGTACAACCTGTGAAAAATAGCATCATTAAAAACCTGGGGTTTTCTACGTCTCAAAACATATGTAAAAGTAGGTAGGAAGTGAAAATGTATTGGTGATTATTTCCCGTCAAGGTTTGACAGTGACACAGATGGGGTTGTTCCTGCTGGAGTGGAAAGCACCCTAAAAGACACAACTCACTGTCACTGTATAGAAGCAACAACACTCAAAGTAAACTTGTTTGCAGTCGTCGTTTTACAAA
>XM_039781169.1
GTTACGTCAGCAAAAAAATCTTGTTTGAAagcaagtttttattttaatgactagCTATATTATTTAGCCTGCCCCGAGCTTGCCATCCagcaaaagacacaaaaaactTCGAAATTtgagacctttaaaaaaaaatctgatttatttgatttatttccGAGTCTGCTGAATCAAATCTGACCCAACGTTAACTTAGCTACTGCTGTCATTTCACACTAGCTACTGCAACAGCAATGGCAGTCGGGCAGTGAGACACATGTCAACAGTCTGTGAGCCGAAAAACATTTACGCTGGGGGCGAGAGAAGACACTTAGCAAAATGTCTCGGCACAGAAATGTTCGAGGTTACAACTACGATGAAGATTTCGACGATGATGACATTTATGGACATTCTGTAGATGACGACTGCTGTATATCACCAGCAACAGCAAATCAGTTTATCTACTCTCGTCAAGAGAGGCAAGCACCAAAAGAGGGGCCTTTAGAAGAGGAAGAATATGAAGATGATGTACCCATGTCCCCTACCATCAGCCACAACCTTGACCCTCTTGACCAAGCCAAGCTGTATTCCTGTCTGGACCATATGCGGACTGTTTTGGGAGATGCAGTGCCAGACTCAATCCTGACCCAGGCAGCCATAAAATGTGGATTCGACCCACAGAAGGCATTGGATGCAGTCCTGTCTGAAGACGCTAAGACAGCCCCAGTTACCAGAAGTACCAATGAAGAGACAGCTTCGGTAGCAAGAGTTAGCCAGGAGAAAGCACCGCTTCCACAAAGAACCAAACAAGCGGCCGTGGTTGAAAAAGGAGCCTGCTTGCCCGCTTCTCACACAGACATTACGTCCAATGCACATAAACCCCAGACCGATTTGTGCGAACACAAATACCCACGTGTGCAAACAAGTGCACCAAACTTGCGTGACCTCTTATCGCAACATAAGGTTGACCCTGTGGTTAGCAGCTCTGAAACTCTAAGTTGTATCCATCAAAACAATGGTCCAGGTGTTAGCAGTGGTGCCAGTCTGGCACAGCTCATGTCACAGCATGAGCAGAAGAGTAAGGCGACAGGAGTAGTTAACACAGGGAGAGGTTTGGGTGTTCCCTCAAGTGCTTTCACCATAGGACCTAATTCACCTCCGTCCATCATGTCTAATCAGAATAGTCTTTCATTGGGAACATTGGCATCTTTAAACATGACTTCAGCATCCCACGGCTCAGCTCCCTCGCTCCTTTCAGTTTCACTCCATAGTCTGTCGCTTAATACTCCCAAGATAACAACTGCAAGTTCTTCTCCGGCTGCTCCTCCTGGGTTTGGGAGTCTCAGTTCTGTCCTCTTGAGCAGTCCGCACCCAGTGGGAGTTGGGACTGGAGGCAAAGCCACAATGGCTGATCCTAAGGGAAGCCAGTCATTGGCTGATTTAATCCAGGAACATTCAAACCGCAGCCCGACCATGAGTTCCTCCTTTCCTACTCTCCAAAGCAGCATAACTTCTGTGACGTGTCAGGGGATGGCTGCACAAACACTCTCGCTGTCTAGCCTCACTTCACAGCACCAAAACAGGGATACGCACATTCAATCACAATCACAGAGCACTAAACAACCAGCAAACACACTCTCCTTTTCTAAACCAACCAACAATACTCCTGCATGCCTAGGTGGTACTGTCTCATTGTCTCAGCTAGCCCTGCAACATCAAACCACCAGTTCCTTTACTTCCCCTCAACCCATCAGGGCTGAATCTCCAGCAAATGCACTTAAACAACCACCTGGCAACTCTGAGCTGCTCTCTTTGTCACATTTGGCATCTGAACACAAAGGCAAAACCTCAACCACCTCAAATGGGTCACAGTACTCCCTCACCTCGCTCCTTTCACCAGCTAAACCAGAGAGGGCTGATGCGTTAGCAGAAAGTACTACAGAGGGTGGGACCAAGCGTAAGCTCGACCACAAACCATACAACCAAAACGTCAGGCTACCTAAGCTGAAGCAGGCTATTGATTTGAGTGCACTCATGGCCCAGTCAGACGAAGCAGGCCCTCGTCACTTTGACAACGACCTCCCTTCACCGTCCTCTCCAACTTCAGTTGCCGTGGGGCTGGATGCTTCAGTTTTTGCACAACCATCAGTATTTGCGATTACTTTGTTGATTCAGAGCCACACACCACAGAAGAGGAAAAGGAATATATTGAGGGGAAAAGTAAGAGGTCAGAGGACAGGAAGTGGTTACCAGGCCTTCCTGTGTAAATCACAGCACAAATCCGAAGAGCATCATGTACCACTCTCGCCAATTGTACCATTCCGCTTTGACGCGCCTTCGCCCGACGACATCGTCCGTGCTAATCAGCGAAAAGCTTTCACCAGGTAGAGAAGAGGATAAAAAATAGCACTTAATTCAGCTGCGTCTAGTTGGTGCTGCATTGACTCACTTGGGAGGAGAACCTGAGATCTTTTTGGTGGCCTTTCCTCCACCAACTGAACTAAACTCAAAGAGATGCAGCATTCGATCGTCAGTCtttttaactgaaataaaataaacttttgGGACCAACAGTACGACAGAATAAGACACTTGCTGTTGATCAGTGCTAAAAATTACTCTTCTAGGAAAAGTATTATTacagcattattttttttatagaggcaAGCAAACAAGTCAATGCTGTTTAAGTCCAGCAGGATTACAGTAAGTACTCAGTCTCTCTGGCAGCTTGAAAATAATCGCAGCTTTTAAAGTACTAGTATTTTATTACTACTACTAAACCTActagtattttattttctcatttacTGTAACTTATTTTTCTATGCTTGGATGGCCATTTACTTTTTAATTGACACGTTTTGTATGAGAATAAATTAGTTTAATCTTAGCCAGGGAAAATTCAAAATGTATATCTTTCTGCATGACCTCTTTTCTAGTTTTGATCTGCATGAACCctcaaaagagaaaaagaggttGATTTTGTTTGCAGGTGTGCTGCAGCTATTGGAATATGGATCAGTTAACCATTGTTCTGGTTTACTGCTGCCTGTGTTTGAGATCATGGGGTAGGCATTTTGGTTTAGAGGACACCTGGAGATTTTCCCATGAGGGAGCGAGAACAaatgcacgtgcacacacacacacacacacacacacacactcttttaaTGTTTGATATTGAAGAACTGAGTTAACTATGAATGCAAGCACTGTGAATAAAGAGTGCACTATGTGACTCAAAATGACTGCCTTCAGACCTGAGGTAAAATGACTTTTGTTTTGCTCTTACAAGCTTTTAATATTACAATGTACAAATGAGTTTGATTTACACTGGGTGTGTCATGACACTCTGCCAGAGGTTAATTTGCCAATTTCGAAATAAAGATTACTACACGTAGGTACCCTGAATGCACCTGTGTCTGGGCGTGTCTCTCTG

Function

symbol description
hbs1l Predicted to enable GTPase activity. Predicted to be involved in translation. Human ortholog(s) of this gene implicated in beta thalassemia. Orthologous to human HBS1L (HBS1 like translational GTPase).

NR:

description
uncharacterized protein LOC110522675

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14416 HBS1; elongation factor 1 alpha-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781168.1 True 3727 mRNA 0.47 18 17480212 17504874
XM_039781169.1 False 3421 mRNA 0.45 5 17480198 17485596

Neighbor

gene id symbol gene type direction distance location
LOC120546616 pde7b,LOC102780239 coding upstream 50196 17407774 ~ 17430002 (+)
mtfr2 NA coding upstream 88479 17378182 ~ 17391719 (+)
ppp1r14c ppp1r14c coding upstream 148831 17312474 ~ 17331367 (+)
nbas nbas coding upstream 345782 16965466 ~ 17134416 (+)
fam228a NA coding upstream 599863 16876319 ~ 16880335 (+)
aldh8a1 aldh8a1 coding downstream 2080 17506954 ~ 17515583 (+)
sgk1 sgk1 coding downstream 55979 17560853 ~ 17596054 (+)
slc2a12 slc2a12 coding downstream 110455 17615329 ~ 17623112 (+)
tcf21 tcf21,LOC102777283 coding downstream 147628 17652502 ~ 17654361 (+)
LOC120546414 NA coding downstream 166639 17671513 ~ 17686499 (+)
G185067 NA non-coding upstream 10623 17468552 ~ 17469575 (+)
LOC120546214 NA non-coding upstream 27136 17449530 ~ 17453062 (+)
LOC120546618 NA non-coding upstream 32395 17430020 ~ 17447803 (+)
G185015 NA non-coding upstream 39598 17438689 ~ 17440600 (+)
G185022 NA non-coding upstream 83150 17393534 ~ 17397048 (+)
G185103 NA non-coding downstream 30980 17535854 ~ 17548289 (+)
G185107 NA non-coding downstream 45684 17550558 ~ 17551105 (+)
G185112 NA non-coding downstream 48568 17553442 ~ 17553909 (+)
G185134 NA non-coding downstream 128245 17633119 ~ 17667720 (+)
LOC120546270 NA non-coding downstream 132078 17636952 ~ 17654361 (+)
map7b map7,LOC107374525 other upstream 105139 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 184497 17293654 ~ 17295701 (+)
G184859 NA other upstream 646884 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 700263 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 794119 16671586 ~ 16686079 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 164298 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 169519 17674393 ~ 17693634 (+)
G185237 NA other downstream 411979 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 516082 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 622257 18127131 ~ 18140260 (+)

Expression


Co-expression Network