LOC120546312


Basic Information

Item Value
gene id LOC120546312
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18957461 ~ 18962093 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781172.1
GTTGAGAGTCACAAACTCTCAAACTGTCTTAATAAGTAAACTTGTTAGGAGTACATCCATTGTAGCCGTTGCTTGTGTAGCTTTGTTTGTCAGAGCTGTTTCTCTTGGCATCAGGAGACAACTAAATGATTGACCCTACAAGAGAAAAGAGGAGCCACATTTTAACTGAATGATTCCTGAACTACCAGGGCTGAGGAGTCTGGATGGAACTTACCACGTGAGTGAACTCAGTTGTTACTTTGACAAAAACTATGAAGGACAGGTGAAGGGACGTTTCCTTTCATCCTGATAGTGTCtgacttttctttcacttttctttGCTGAAATAGCTGAAACATTGCTCAGGCTCTTAAATTAATGTATTCTTTCAGCAAAACCATCAACAACTGTTGTCCACAGATGTCCCACGTAGCTAACCAGTATTTGGTTCATTTCTAACAGCCACTATACATACACTGTTCTCTGATCTTAAATGATAATcagtctgtttttattcaggttAAGTCGTAAACGATCTCTGTTAAGTGGATATGAAAAGGAGCCTCCACTGTACACAAAGAAATGTTTGGCCAGTCTGAAAACTCTGCTGGACAGATATGAGACTGATAGAGCCACAGAGCATGTCAAACTGAAGACGAGCTGGGGTCGGCCCTGCACACCTGAAGCCTGTGTGAATGGACGGTCACAACTCCTGACGGACACTGAGAGCTTCTTCCAGCAGGTATCATCCTGGGCTGACACACAATACTCTGTGAAGAAAGTATTGGAGCATCTCAAGTTCAGACAAGCCTCCAATGACATCTTACTCAATGAGTCAATTAACAAGAAATTTTTGGAGTTTCGGCGTGACATCACTGAGGAATGTGGTGCAGAAGATAAGCAGCATTCATGGGCCGTTAttgagaaacaggaggaggtCGTCATGTATGGACCTTATTATCCTAATTACAACAACGGAGAACACAGCGAGGACATCCTTATAAAACAAACCCAGGAACTTCTGGAGTCAGAGACTGTCTCAGAGGAGTGTAAGGTGTATGTTTTCACCATGAACAGCCCGTGTTTGGCTAGAAACACAGATCCATGCATGCTGAACCTGGTTCAGAAAGCTAAGGAGTGGTGGAGCGTGTATGGAGTAAAGACTCATATTGGTTTTGTGAAAAGCTGGGGCTTCAAAGGAGCCAAAGAAAATCTGTTCAGGGATATTAACTACAGCCAAGTGGACTGTATCGATCAGGCTGAGGACCATGAGAACTACGTCAAAGCAGCTGAAAAGGCAGATCTTAATCCTTTATGTGAAAATCTGTTTTCTAATGTGAAATACCTTCAGAGATCTGCAAGGTTCTCTTTGATAAACAATGTGCAGGGGTCAGACTGGAAGAGTTACTTCAAAAGTATGCATAGCATTTTTGAAAGCAAAccagaagaggagaagaaaatcTGCACACAGGAGGCAAACACTGTGATCGAAGCTGCACAAGTTCTGCTTTCAGAAAAAAGTGGAAGCTTTGAGGAATATTTAGACAAGGGAGGTGCATTTGCTTTTGATTACACTTTTAACTCACAAGTATCTGACGTCATCCAGGATCAAATGAGACTCacatttcaacagtgttggAAAGAGATGGTGCAGGACAAATATGCCAAGATCATCAGGGAGAAGCTGACTGAAGACTTCAATCAATGTGCCGTCCATGTTTTTATCAAAGATATTGTAAAGTTCACAAAAGAATACTTAGAAATTGGAAGGATGCAGTTTTCAGAAGAAGCCCCACAAGTTGTCCGATAACTAAACTCTTTGCCAAGATGATGAGGAAGCTACTGTAAGACTAAATATTTCACACATTTGGTATGCATTTCAAGTGAAATGAATGACGCCAAACTTTTACACCATTTGCATTATGTCAAAATGCTTTGTCTTTATTAGTTTCCTCAGTAGAGCTACAGTTGCACACAGAGGAAGGGCATCAGGTAGTGTTATTCCACATGTCCACATCTTTCACTGTATCTTTACTGACAAAATATCACAAATGGTGTATTACAATTATACTGGAGTGGAGTTTTTACATATATGCTCATATATTTGTTGATAATTACATATGGCGACAATGTCCCACATTAACACATGTTGCCCCAGCCCCCCATACTTGTCATAAGCAAATTAAAGCATGAAGTATTTGGTAACAATCTGTACAGTCTTGATACAATACACCGTCATAAAGTCTATCAAACAACCTTGAGCTAATAGATTATGGTTAGATGATTGTGTGGTTTGGGGCTGTGccttttaataataaatactaGCAGGATTAAAGTtgattatgcttttttttatggATGCACATCTGCACTTGTGTCAGCAGAGGGAGCTATGTGCCATTACTTCCATCTGCATTCATAATGTGCAACTTAACTTGCTGCATAGGTagtttattatgtattttttcatAGAGATGTCAATACTGACGCACGTTAAATTGAAAGCCACGCCGCTCAGGTAACTGTCCAGAAACAAAGAGGGAGATCACATATACTGAAGGTCTTGAGGAGTGATGATGTCTTGAGCAATTCTCTCTTACAATAAGTTTAGAAGAAATTCTCATGATTATCTTCTCTTTGTAAAATTAGATGTACTGTGAAATTACCTGTGCATTACAATCAGTGGTATCACATATAAGGGACTGTAATCATTGAATGTCAAGTTTGGGAAAtgtttaaagggtcagttcatcCGAATCACAATTCACATACATATCTGTTTCCATTTTGAGATATTGCTGCTCAGACTGAGCCGCCCTATTACAGCTAAGATGACTGCTTGTTTGAGTGTTGTGCTAAATTAATTGACATCCTttgaaaatctataaaaaatagCAAAGTGCTTTACTGGATACAGTTTGAATCATCTACCAAACATACAGAATACTGATCACATTGAGGTCTGTGGATTATTAAGTAACCGGCACATCGTTTGTTCTGTAAAGAGACTAgagtaaaaatacattttcattcaCCTCCATTGCATGCAATGCAAGTAAATAGGCCTACCCCTTGTGAGTGTGAAAATAtatagttgttgtttttcttattaatgtgaactgaccctttaagtACACTTGCTACTCCATGGTGCTACGTTTGACTTTGAAGGGTGCTGTTGTGATTCTTGTGTGTGTCCATCATTCTTTGGCAACTTGTCCTTATTAATATGAAAATGACATAAAAATAACTCAGGGAAATAAAGTCTGAccattattgtta
>XM_039781173.1
GTTGAGAGTCACAAACTCTCAAACTGTCTTAATAAGTAAACTTGTTAGGAGTACATCCATTGTAGCCGTTGCTTGTGTAGCTTTGTTTGTCAGAGCTGTTTCTCTTGGCATCAGGAGACAACTAAATGATTGACCCTACAAGAGAAAAGAGGAGCCACATTTTAACTGAATGATTCCTGAACTACCAGGGCTGAGGAGTCTGGATGGAACTTACCACgttAAGTCGTAAACGATCTCTGTTAAGTGGATATGAAAAGGAGCCTCCACTGTACACAAAGAAATGTTTGGCCAGTCTGAAAACTCTGCTGGACAGATATGAGACTGATAGAGCCACAGAGCATGTCAAACTGAAGACGAGCTGGGGTCGGCCCTGCACACCTGAAGCCTGTGTGAATGGACGGTCACAACTCCTGACGGACACTGAGAGCTTCTTCCAGCAGGTATCATCCTGGGCTGACACACAATACTCTGTGAAGAAAGTATTGGAGCATCTCAAGTTCAGACAAGCCTCCAATGACATCTTACTCAATGAGTCAATTAACAAGAAATTTTTGGAGTTTCGGCGTGACATCACTGAGGAATGTGGTGCAGAAGATAAGCAGCATTCATGGGCCGTTAttgagaaacaggaggaggtCGTCATGTATGGACCTTATTATCCTAATTACAACAACGGAGAACACAGCGAGGACATCCTTATAAAACAAACCCAGGAACTTCTGGAGTCAGAGACTGTCTCAGAGGAGTGTAAGGTGTATGTTTTCACCATGAACAGCCCGTGTTTGGCTAGAAACACAGATCCATGCATGCTGAACCTGGTTCAGAAAGCTAAGGAGTGGTGGAGCGTGTATGGAGTAAAGACTCATATTGGTTTTGTGAAAAGCTGGGGCTTCAAAGGAGCCAAAGAAAATCTGTTCAGGGATATTAACTACAGCCAAGTGGACTGTATCGATCAGGCTGAGGACCATGAGAACTACGTCAAAGCAGCTGAAAAGGCAGATCTTAATCCTTTATGTGAAAATCTGTTTTCTAATGTGAAATACCTTCAGAGATCTGCAAGGTTCTCTTTGATAAACAATGTGCAGGGGTCAGACTGGAAGAGTTACTTCAAAAGTATGCATAGCATTTTTGAAAGCAAAccagaagaggagaagaaaatcTGCACACAGGAGGCAAACACTGTGATCGAAGCTGCACAAGTTCTGCTTTCAGAAAAAAGTGGAAGCTTTGAGGAATATTTAGACAAGGGAGGTGCATTTGCTTTTGATTACACTTTTAACTCACAAGTATCTGACGTCATCCAGGATCAAATGAGACTCacatttcaacagtgttggAAAGAGATGGTGCAGGACAAATATGCCAAGATCATCAGGGAGAAGCTGACTGAAGACTTCAATCAATGTGCCGTCCATGTTTTTATCAAAGATATTGTAAAGTTCACAAAAGAATACTTAGAAATTGGAAGGATGCAGTTTTCAGAAGAAGCCCCACAAGTTGTCCGATAACTAAACTCTTTGCCAAGATGATGAGGAAGCTACTGTAAGACTAAATATTTCACACATTTGGTATGCATTTCAAGTGAAATGAATGACGCCAAACTTTTACACCATTTGCATTATGTCAAAATGCTTTGTCTTTATTAGTTTCCTCAGTAGAGCTACAGTTGCACACAGAGGAAGGGCATCAGGTAGTGTTATTCCACATGTCCACATCTTTCACTGTATCTTTACTGACAAAATATCACAAATGGTGTATTACAATTATACTGGAGTGGAGTTTTTACATATATGCTCATATATTTGTTGATAATTACATATGGCGACAATGTCCCACATTAACACATGTTGCCCCAGCCCCCCATACTTGTCATAAGCAAATTAAAGCATGAAGTATTTGGTAACAATCTGTACAGTCTTGATACAATACACCGTCATAAAGTCTATCAAACAACCTTGAGCTAATAGATTATGGTTAGATGATTGTGTGGTTTGGGGCTGTGccttttaataataaatactaGCAGGATTAAAGTtgattatgcttttttttatggATGCACATCTGCACTTGTGTCAGCAGAGGGAGCTATGTGCCATTACTTCCATCTGCATTCATAATGTGCAACTTAACTTGCTGCATAGGTagtttattatgtattttttcatAGAGATGTCAATACTGACGCACGTTAAATTGAAAGCCACGCCGCTCAGGTAACTGTCCAGAAACAAAGAGGGAGATCACATATACTGAAGGTCTTGAGGAGTGATGATGTCTTGAGCAATTCTCTCTTACAATAAGTTTAGAAGAAATTCTCATGATTATCTTCTCTTTGTAAAATTAGATGTACTGTGAAATTACCTGTGCATTACAATCAGTGGTATCACATATAAGGGACTGTAATCATTGAATGTCAAGTTTGGGAAAtgtttaaagggtcagttcatcCGAATCACAATTCACATACATATCTGTTTCCATTTTGAGATATTGCTGCTCAGACTGAGCCGCCCTATTACAGCTAAGATGACTGCTTGTTTGAGTGTTGTGCTAAATTAATTGACATCCTttgaaaatctataaaaaatagCAAAGTGCTTTACTGGATACAGTTTGAATCATCTACCAAACATACAGAATACTGATCACATTGAGGTCTGTGGATTATTAAGTAACCGGCACATCGTTTGTTCTGTAAAGAGACTAgagtaaaaatacattttcattcaCCTCCATTGCATGCAATGCAAGTAAATAGGCCTACCCCTTGTGAGTGTGAAAATAtatagttgttgtttttcttattaatgtgaactgaccctttaagtACACTTGCTACTCCATGGTGCTACGTTTGACTTTGAAGGGTGCTGTTGTGATTCTTGTGTGTGTCCATCATTCTTTGGCAACTTGTCCTTATTAATATGAAAATGACATAAAAATAACTCAGGGAAATAAAGTCTGAccattattgtta
>XM_039781174.1
GTTGAGAGTCACAAACTCTCAAACTGTCTTAATAAGTAAACTTGTTAGGAGTACATCCATTGTAGCCGTTGCTTGTGTAGCTTTGTTTGTCAGAGCTGTTTCTCTTGGCATCAGGAGACAACTAAATGATTGACCCTACAAGAGAAAAGAGGAGCCACATTTTAACTGAATGATTCCTGAACTACCAGGGCTGAGGAGTCTGGATGGAACTTACCACGACGAGCTGGGGTCGGCCCTGCACACCTGAAGCCTGTGTGAATGGACGGTCACAACTCCTGACGGACACTGAGAGCTTCTTCCAGCAGGTATCATCCTGGGCTGACACACAATACTCTGTGAAGAAAGTATTGGAGCATCTCAAGTTCAGACAAGCCTCCAATGACATCTTACTCAATGAGTCAATTAACAAGAAATTTTTGGAGTTTCGGCGTGACATCACTGAGGAATGTGGTGCAGAAGATAAGCAGCATTCATGGGCCGTTAttgagaaacaggaggaggtCGTCATGTATGGACCTTATTATCCTAATTACAACAACGGAGAACACAGCGAGGACATCCTTATAAAACAAACCCAGGAACTTCTGGAGTCAGAGACTGTCTCAGAGGAGTGTAAGGTGTATGTTTTCACCATGAACAGCCCGTGTTTGGCTAGAAACACAGATCCATGCATGCTGAACCTGGTTCAGAAAGCTAAGGAGTGGTGGAGCGTGTATGGAGTAAAGACTCATATTGGTTTTGTGAAAAGCTGGGGCTTCAAAGGAGCCAAAGAAAATCTGTTCAGGGATATTAACTACAGCCAAGTGGACTGTATCGATCAGGCTGAGGACCATGAGAACTACGTCAAAGCAGCTGAAAAGGCAGATCTTAATCCTTTATGTGAAAATCTGTTTTCTAATGTGAAATACCTTCAGAGATCTGCAAGGTTCTCTTTGATAAACAATGTGCAGGGGTCAGACTGGAAGAGTTACTTCAAAAGTATGCATAGCATTTTTGAAAGCAAAccagaagaggagaagaaaatcTGCACACAGGAGGCAAACACTGTGATCGAAGCTGCACAAGTTCTGCTTTCAGAAAAAAGTGGAAGCTTTGAGGAATATTTAGACAAGGGAGGTGCATTTGCTTTTGATTACACTTTTAACTCACAAGTATCTGACGTCATCCAGGATCAAATGAGACTCacatttcaacagtgttggAAAGAGATGGTGCAGGACAAATATGCCAAGATCATCAGGGAGAAGCTGACTGAAGACTTCAATCAATGTGCCGTCCATGTTTTTATCAAAGATATTGTAAAGTTCACAAAAGAATACTTAGAAATTGGAAGGATGCAGTTTTCAGAAGAAGCCCCACAAGTTGTCCGATAACTAAACTCTTTGCCAAGATGATGAGGAAGCTACTGTAAGACTAAATATTTCACACATTTGGTATGCATTTCAAGTGAAATGAATGACGCCAAACTTTTACACCATTTGCATTATGTCAAAATGCTTTGTCTTTATTAGTTTCCTCAGTAGAGCTACAGTTGCACACAGAGGAAGGGCATCAGGTAGTGTTATTCCACATGTCCACATCTTTCACTGTATCTTTACTGACAAAATATCACAAATGGTGTATTACAATTATACTGGAGTGGAGTTTTTACATATATGCTCATATATTTGTTGATAATTACATATGGCGACAATGTCCCACATTAACACATGTTGCCCCAGCCCCCCATACTTGTCATAAGCAAATTAAAGCATGAAGTATTTGGTAACAATCTGTACAGTCTTGATACAATACACCGTCATAAAGTCTATCAAACAACCTTGAGCTAATAGATTATGGTTAGATGATTGTGTGGTTTGGGGCTGTGccttttaataataaatactaGCAGGATTAAAGTtgattatgcttttttttatggATGCACATCTGCACTTGTGTCAGCAGAGGGAGCTATGTGCCATTACTTCCATCTGCATTCATAATGTGCAACTTAACTTGCTGCATAGGTagtttattatgtattttttcatAGAGATGTCAATACTGACGCACGTTAAATTGAAAGCCACGCCGCTCAGGTAACTGTCCAGAAACAAAGAGGGAGATCACATATACTGAAGGTCTTGAGGAGTGATGATGTCTTGAGCAATTCTCTCTTACAATAAGTTTAGAAGAAATTCTCATGATTATCTTCTCTTTGTAAAATTAGATGTACTGTGAAATTACCTGTGCATTACAATCAGTGGTATCACATATAAGGGACTGTAATCATTGAATGTCAAGTTTGGGAAAtgtttaaagggtcagttcatcCGAATCACAATTCACATACATATCTGTTTCCATTTTGAGATATTGCTGCTCAGACTGAGCCGCCCTATTACAGCTAAGATGACTGCTTGTTTGAGTGTTGTGCTAAATTAATTGACATCCTttgaaaatctataaaaaatagCAAAGTGCTTTACTGGATACAGTTTGAATCATCTACCAAACATACAGAATACTGATCACATTGAGGTCTGTGGATTATTAAGTAACCGGCACATCGTTTGTTCTGTAAAGAGACTAgagtaaaaatacattttcattcaCCTCCATTGCATGCAATGCAAGTAAATAGGCCTACCCCTTGTGAGTGTGAAAATAtatagttgttgtttttcttattaatgtgaactgaccctttaagtACACTTGCTACTCCATGGTGCTACGTTTGACTTTGAAGGGTGCTGTTGTGATTCTTGTGTGTGTCCATCATTCTTTGGCAACTTGTCCTTATTAATATGAAAATGACATAAAAATAACTCAGGGAAATAAAGTCTGAccattattgtta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781172.1 True 3261 mRNA 0.39 2 18957461 18962093
XM_039781173.1 False 2980 mRNA 0.39 3 18957461 18962093
XM_039781174.1 False 2845 mRNA 0.39 2 18957461 18962093

Neighbor

gene id symbol gene type direction distance location
LOC120547084 LOC103364980,LOC104947346 coding downstream 25372 18914867 ~ 18932089 (-)
LOC120546204 NA coding downstream 44380 18908657 ~ 18913081 (-)
LOC120546626 ppp1r13b coding downstream 59150 18873734 ~ 18898311 (-)
LOC120546718 daam1 coding downstream 87852 18819081 ~ 18869609 (-)
LOC120546603 LOC104951063,LOC103372632 coding downstream 266505 18687807 ~ 18690956 (-)
LOC120547184 NA coding upstream 52902 19014995 ~ 19046063 (-)
snx9b snx9,LOC100707634,LOC106957401 coding upstream 115185 19077278 ~ 19095705 (-)
LOC120546612 ptpn14 coding upstream 307843 19269936 ~ 19313039 (-)
LOC120546711 LOC102214046 coding upstream 431648 19393741 ~ 19395361 (-)
mixl1 mixl1 coding upstream 450675 19412768 ~ 19414710 (-)
G185556 NA non-coding downstream 42990 18913813 ~ 18914471 (-)
G185479 NA non-coding downstream 224651 18726872 ~ 18732810 (-)
G185438 LOC104951064,LOC103372631,LOC100709203 non-coding downstream 259233 18695681 ~ 18698228 (-)
G185467 NA non-coding downstream 262665 18694554 ~ 18694796 (-)
G185454 NA non-coding downstream 320799 18636384 ~ 18636662 (-)
G185619 rps6kc1 non-coding upstream 147416 19109509 ~ 19110183 (-)
LOC120546625 NA non-coding upstream 228143 19190236 ~ 19203995 (-)
G185644 NA non-coding upstream 235659 19197752 ~ 19197969 (-)
G185721 NA non-coding upstream 405845 19367938 ~ 19368768 (-)
G185741 NA non-coding upstream 449627 19411720 ~ 19434102 (-)
LOC120546223 LOC102213764,LOC101481591 other downstream 50207 18904537 ~ 18907254 (-)
abcd4 abcd4 other downstream 167088 18778130 ~ 18790373 (-)
LOC120546357 LOC106525279 other downstream 310060 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 451263 18489815 ~ 18506198 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 1044425 17911270 ~ 17913036 (-)
LOC120546238 efr3b,LOC101073163 other upstream 371962 19334055 ~ 19354316 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other upstream 686434 19648527 ~ 19652927 (-)
ccdc167 ccdc167 other upstream 884865 19846958 ~ 19849804 (-)
G186006 NA other upstream 1600344 20562437 ~ 20567479 (-)
syne1a syne1,LOC102291171,LOC103355013,LOC102194633 other upstream 2050299 21012392 ~ 21154812 (-)

Expression


Co-expression Network