LOC120546316 (LOC104947340,LOC103364984,LOC107377588,LOC106510778)


Basic Information

Item Value
gene id LOC120546316
gene name LOC104947340,LOC103364984,LOC107377588,LOC106510778
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18982177 ~ 18989774 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781179.1
TATTTGTAGTCAATCTGTGGATGCCCCCTAACTTGCCCTATGCTTTCTCCATGTTGAAGCTAACGGACAATAACATGAGGCGGACATTGACGTTGGTGCTGTCGCTTTAAACATATCTGAGAACCAGGAAGCAGCAGCTCCTGGAAAAACACCGCTGAATAAAAGCCTGCAGGTGGTGGATAACGTTACCGATACCGGGCCCGGCTCCCATTACAGCCAGAGGTGGTGTGACTGTAACACATCTTTAACGttagatgatgatgataaaggTTGTCGGGCATTACTGtacctaacgttaacgttacatgtcTTGCTGTCAGTTGTCTGTTCCGTTGTGTCGGTTAAGGAGTCATTTACCGTTACATACCGTGAGCTAGCAGGTTAGCTCTATTCTGTAGCTAACGTTTACTTGTGTGGCAAAAAGCCATGTTTGTATCACATTTGGAACTGTGGAGAACATATTGGGAGTGTTCCAGACCTTACACGGTGTACATCTGCTCCGTCACGGCCGCACTGTACTATCTGTGGGGCCGCAAGTCTCAGGCACCAGCCCTGGTTTCTAGCAAGGCTTTTAGCGCATTCCTCCACAAGCACTGTCCTGTTGTGGCTGAGCGCTTCAGTCCCACTCCGTGGTGCTGGGGAGGCCGGCTTCAAACCCTGGTCTGTGCCCTCCTCAAGTCCAGACCCCCCGTCACTTATCGCAATGAGCTGATCCGTACGGTTGACGGGGGTCAGATCTCTCTGGACTGGGTGGACAATTGGGAGAGTGCAAGCTACCCAGAATCCTCTACCCGCCCCACAGTATTGATCCTCCCAGGCCTGACCGGCAACAGCAAGCAGTCATATGTGCTCCATACCATTAGCCAGGCCACCCGCCGCGGCTACAGGTCAGTTGTGCTCCTCATCTaTGTGTGGTTCAACAACAGAGGGCTTGGAGGGGAAGAGTTGTTGACGCCTGTCACCTACTGTGCAGCCAATACCTCAGATCTAGAGCGTGTGGTGCACCATGTCAAAGGACTTTACCCACATGCCCCTGTGCTTGGTGCTGGTGTGTCTATGGGAGGCATGTTATTATTGAACTACCTGGCCCGTAAGCGTACAGAGTCAGGGATGGTAGCGGGTTTCACCATCTCTGTCCCCTGGAATGCACTGAAGTCCGCTGCCTCAATGGAAGAACCACTCAACTGGCTGCTCTTCAACAAATACCTCACGAGCGGCCTGTGTCATGCTGTTACCAGGCACAGGAAGGTTCTGGAGGAAGTAGCGGACATTGACTATGTCTTGAAGGCGCAGACTATCCGTGAGTTTGACGAACGCTTCACCTCTTTGCTGTTTGGTTATAAAACTTGTACGGACTATTACCTTGATGCCAGTCCAGACAATAAACTCCCCAATACAGCAGTACCCATCTTGTGTCTCAATGCTGCTGATGACCCCTTCTCCCCCCAACATGCCTTCCCGTTGACCACAATCCAGAGCCTGCCGAACGTTGCTTTGTTGTTGACGGCCCACGGTGGACACATCGCCTTCATGGAGGGGTTTTTCCCCCGGGgtgagagctacatggagcgCCTTTTTGGTCAGTTTGTTCAAGCTGTCTTTGAACACCCTAAGGACATCAAGAAAGCCTGCGGCATTAGGGAGGAGCATAAGAGCTGATCATCTTTCACCCCGTCACTTTGTTTGTTCTCTGAACCTGAGTGAATACAATAATGACTGCTAGCTGAGAAGAATTTAAAGGTCACTGGCGTCATAGCAGTAGAACAGCAATTTACAAAAATGATTGCCCCACTTTGCATGCTGTGATCTTACCACAGAAAATTGGTCCCCTCCATGTTTGCACAGGGAATGACCGACTGTATTTTACCATCATATTACCTCACTACAAATATGCTTATCTACCTCCTCATCGTCTCAGGTTCTCCTTTTATTGAGCAATCAACAAAGGTTTAAAGAAGTCTAGAACTCATTTTTTAAGTATTCAAGAAATCTTGCAGCCAACTAATAAGTGAATGTCTAATAATATTGTatcaacacaaaaaacaatatatactaGTAGTACTAATATTAGtgtatgaataaatgaatgtttatttaaaataaaaaagtcaataGACTCTAAATAGCTTTTAATCATGTTGTTTTTCCCACAGGCCGTCCCAGTTGTACTTGGCGCACAATTAGAAAATGAGTGCTTGGATTTTAGGAAGTATTTGAAATTGTTATTTAAATTAGAACAGTTATACAGATATACTTTTTGTTTTGCCTCATAAGCTACTTTGGTTTGGTGTAACATTCCTTTAAGGACTATACTTCCCCACATTTTAGCCTTGCATGCATACTTTGCATACAATTTCTCAGTTTATACCATACAGTGAGGTAATCCTGCCAACAGTTCAGTTGTCAGAACTGTCGGTCTCAACCTGAAAACAGCCACACACCAGGAATGAACATATCTGCTATGAAGAAAAGACTTATGGAATTGTAATATAGAATTCTCATCTGAGTTtttgattttaaaacaaaatctaaaatgtaaaagtattgTATGCTTGTATATGCTTTTGAAGTGTACAGGTAAAATGTAAATTATGCAGTACATCAAATGCGACTGagcaaaaaacaatgtaaaaagtACTTGGGGTATTTGCACCTGCAGTCAATAATTTAATAGCGAGTGGTTCTGAATTTGTATGTGTTGTAATCTGCCTTTGTTTGTCACTGACGCACTTTTTTGTTAAGGTAATGAGTGATAGATAAAAGAATGTCTGTCACATCTGTATTGTGGCCACCTTCATTCCACATGATTATTTTTGATATGTACTTATAGAAGGTAATTGTGTATTTATagaaggttgtgtgtgtgtgaattagtCAAGAATCTGTAGGTTTttaattatgtgtgtgtatcaccAGTAGGGCACTGATGATACACACACCATTTTATGATGCCAATACCAAGATATTTTCCCCCAGAAGCTACAGTTGTTTGACTCTAAATGTGACTCAAGATTATTGCAGCATATGTTGCTAATTGTGGGCTTATTGCGTTTTATTTGCTCTTCAGCTGCTTGCAGATGTTCACCACTTTCACTTGCCTTtgactgctgtgtgttttttaatggacaaatgtttattttctgtttaagTTTAACTTCTGTACTATATGAGCTATAACCACAATCACGGTGTGTTTGCACTGTCAGTTAAGATTCTTACCCTTCACCTGAAAGAACTTTGTGCATTATGAACtatctatttgttttttttgtgtattgaaTTACACTTGAATTAAAGAGTGACAATAA

Function

NR:

description
PREDICTED: abhydrolase domain-containing protein 3-like isoform X1

GO: NA

KEGG:

id description
K13696 ABHD1_3; abhydrolase domain-containing protein 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781179.1 True 3308 mRNA 0.43 9 18982177 18989774

Neighbor

gene id symbol gene type direction distance location
ctsbb ctsb,LOC104947341 coding upstream 999 18977830 ~ 18981178 (+)
fdft1 fdft1 coding upstream 4726 18966206 ~ 18977451 (+)
gata4 gata4,LOC102782453 coding upstream 23375 18948320 ~ 18958802 (+)
trnae-cuc_27 NA coding upstream 49790 18932316 ~ 18932387 (+)
LOC120546190 l3hypdh coding upstream 163734 18814609 ~ 18818443 (+)
prkg3 LOC104947339,LOC103364985,LOC100708987,LOC101479945 coding downstream 1172 18990946 ~ 19003030 (+)
si:ch211-203k16.3 LOC102290548,LOC102780528,LOC100708179,LOC101478729,LOC102192128,LOC103369909 coding downstream 80895 19070669 ~ 19076482 (+)
moxd1l NA coding downstream 107285 19097059 ~ 19102420 (+)
rps6kc1 rps6kc1 coding downstream 112809 19102583 ~ 19126659 (+)
smyd2b smyd2,LOC103360985 coding downstream 270488 19260262 ~ 19269398 (+)
G185495 daam1,LOC108240128 non-coding upstream 161031 18819084 ~ 18821146 (+)
G185471 NA non-coding upstream 276943 18703965 ~ 18705234 (+)
LOC120546607 NA non-coding upstream 292144 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 337023 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 341796 18636374 ~ 18640381 (+)
G185589 NA non-coding downstream 24952 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 32922 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 34490 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 53450 19043224 ~ 19043548 (+)
G185593 NA non-coding downstream 55640 19045414 ~ 19046107 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 270183 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 347125 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 841917 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 927251 18020956 ~ 18054926 (+)
G185237 NA other upstream 1064929 17916853 ~ 17917248 (+)
LOC120546624 prox1 other downstream 214380 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 364842 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 377946 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 439821 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 582799 19572573 ~ 19620783 (+)

Expression


Co-expression Network