prkg3 (LOC104947339,LOC103364985,LOC100708987,LOC101479945)


Basic Information

Item Value
gene id prkg3
gene name LOC104947339,LOC103364985,LOC100708987,LOC101479945
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18990946 ~ 19003030 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781180.1
gagaaaaagaggaggaaagatttagagtgagaaagagagagagagagagacagagagaagtaaAAATAGTGAAAGCTGAAGAGCAGAAATGGCAATGTAAGCTGAGAAAGTGTGCAGTGGTAGAAGAAGTAATGCTAGAAAGGGTTGCAGACTGCATGCTTTTATCTGCTCAGGTGTGTCTGGGGGTCAGGCAGGTCTGAGatactgaacacacagggtCTCTACAGCTGATAGTGGATCTTGTGAGCACTTCAGTGTGATTATTTAGCTCCTATGATCCATGCAGCCTCTATAGGCTGGACAGACATTCATCTACTCTCCTGATCCACACACAGCCTGCAGTCATGGAGAAGCAACTAGAAGAGCTGAAGCAGCAGCTAGAAAAACAATGTATGATTAACCAGGAGCTGCAGAGGCAAAACAAAGACCTGGAACAAAGACTGCaggagaaagaaaaacttttgcAGAATCTGGACAGTCAATATCATAATCTGGAGTTTCCCTCTCAGAGCGGTAATGAGATTGAACCGGAGGTCAGGACGAGCCGTGCGGCTGTCATTGCCTCAGAACCGCTCCCTGAGACCCTGGAGATTACACGCATGAGGGTCAAGAAGACTGTCAGCGAGACAAACCTGATCATCAAAGCCATCCAGAAGAATGACTTCCTGAGCCGCCTCGACGATGAGCAAACAGCCATGATGGTGGACCTCTTAGCGGTATTTAACTTCAAACCGGGAGATGACATCATTAAAGAGGGCTCTGAAGGAGACAGCATGTACATAGTAGCAGCTGGTGAGCTCCTCGTCACCCAGGCGGGCCGGAACCTCCGCAGCCTAACCACTGGTGATGTGTTTGGGGAACTGGCTATTTTGTACGACTGCAAACGGACAGCAACAGTCAAAGCAAAGACAGCAGTGCGTCTGTGGAGCATGGAGCGACAGACCTACAGGACGATCATAACCAACAAGTCCAAGAAGAAACGGGAGCAGCTCATGGGCTTCTTGAAGACGTCTCATACTCTAAAGGACCTGAATGATGTCCAGTTGTCCAAAATCCTTGACTCTATGGAGGAGGTGAAGTACCAGGATAAAGATGTTATAGTTCGAGAAGGAACAGAAGCGAACACATTCTACATCATCCTCAAAGGAGAGGTCCTGGTGACTAAGAACGTGAATGGGCATCAGAAGCAGATCCGTAGAATGGGAAAAGGGGAGCATTTCGGGGAACAGGCCCTCATACGGGAAGTGTTGagaactgccacctgcagtgcTGACGGGCCTGTTACCTGCTTCTCCATTGACAAGGAGGTATTTGAAGAGACAATTCCTATAGAACACCTGGAGCTGTTTGACGACTCCAAAGTGCTGCAGGAGGTACAAGTTCCAGAAAGGCCGAGTCCCAGCTCCACTCTGAGGTTTAAGGACCTGGTCCCTGTGCCATACCAGGAGGGTCGCTATCAAGGAGATCCCGTCACGCTTGGAGTTGGAGGGTTTGGTCGTGTTGCGCTGATGACCACAGTGAATCATGGGACATATTACGCCATGAAACGAGTCAGCAAGAAGCTCATTGTTGCCAAGAGACAGGAGGAGCACATGTTGTTTGAGAAAAAGATCCTCAAAGCCACCCAGTGTGACTTCATCGTCAGGCTTCATGCTGCTTTTAAGGACAAACGATACATCTACATGGTCATGGAGTTCTGTGCTGGAGGAGAGATCTGGACCAAACTAAAAGAAGTAGGGCGTTTTGACGAGCCCATGGCTGTGTTCTGCACTGCCTGTGTGGTGGAGGCCTACGCCTACCTCCATAAGAAGAACATCATGTACAGAGACCTGAAGCCTGAGAACCTGATGCTGAACATAAAGGGCTACGTTAAACTGgtGGACTTTGGTTTTGCAAAGGAGTTGGTGCGTGGTGAGAAAACCTACTCATTTGTGGGTACTCCTGAGTACATGCCCCCAGAGATCATCAAGAACCAGGGACATGACTTTGCAGTTGACTTTTGGTCCCTCGGCATCCTGATCTATGAGCTATTGGTGGGAAGCCCTCCATTTTCAAGTTCAGAGCCTCAGAAGATTTATGCCAAGATTTTGGACGGGGTGCTTAAGTATCCACCTTACATGAGCGAGTCAGCCAAGTCCATTATCAGCAAATTATGCAGACCTCGGCCAGGTCAGAGGTTAGGAAACACCAAGAATGGAATCAAAGATGTCCGGCATCACAGGTGGTTCAGCAGTATGAACTGGCACAAGCTGCGAGTAGGTCAGCTTGACGCCCCCACAGTCCGGCTCATACGCAAGGGCCCCTGCTACATCAACTTTGATCGTTTCCCTCTGGATCAGACTAAAGCAGAGGAGGAGTTCTCTGGTTGGGACCGTGACTTCTGATATTTGACTCCTGATATTAAAGGTTCAAAGGCCTCAAGTGTTCAGGATAACCtcagtttaaaagaaaacatgatGGTAGTATCATATTGAAATAAACATAACCCATTTCCTACTAATTGGATTATTAAATTAGTGTGGAACAGCAGGGAATCACCTCTTCCAAAGTATTTATTGAAGCTTCTATTGAACCATCTAGGTGGCAAAGAGCCAGACATATGAGGAGGTGTTGAGACAGCACAGGACATTCTGTTTCCAAATTCTGTGCAGGGAGATTTGGTGCCTGATGAAGTAGTGTGAATAACATCATGCATATGACACTCTTCACTGATTAGAATaaaacacctgtccatgtgcttGCTagctgagaaaaaaagaaatcgcttAAGTGCTTTTGTACAATCTGTACAAACGgtaaacaataaaattgatACTGATGTCATATCTGTATTGTACTCCATAgtttattgttctttttgaTCTGTGTTAGTTTGAGTGATGACACATGCTTAACGGCTTTTAGCAAAGCTTGTAAATGCTTTAGTATTGTTAAAgttggttttttttattgttaactGTCACTTTCTTGAGGAGTTTCTCCTATGTTTTTGGATAATCTGACCCTTTTTGTGGATTATTTTGTGGATTATTTCATGCACCTTGATTGGATCTTAAAAAGATCATAGAAGCATTTCTATGTTACTCAAGTTTACTAAATAAAAGTGCTCTTATTTGA

Function

NR:

description
PREDICTED: cGMP-dependent protein kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781180.1 True 3117 mRNA 0.46 22 18990946 19003030

Neighbor

gene id symbol gene type direction distance location
LOC120546316 LOC104947340,LOC103364984,LOC107377588,LOC106510778 coding upstream 1172 18982177 ~ 18989774 (+)
ctsbb ctsb,LOC104947341 coding upstream 9768 18977830 ~ 18981178 (+)
fdft1 fdft1 coding upstream 13495 18966206 ~ 18977451 (+)
gata4 gata4,LOC102782453 coding upstream 32144 18948320 ~ 18958802 (+)
trnae-cuc_27 NA coding upstream 58559 18932316 ~ 18932387 (+)
si:ch211-203k16.3 LOC102290548,LOC102780528,LOC100708179,LOC101478729,LOC102192128,LOC103369909 coding downstream 67639 19070669 ~ 19076482 (+)
moxd1l NA coding downstream 94029 19097059 ~ 19102420 (+)
rps6kc1 rps6kc1 coding downstream 99553 19102583 ~ 19126659 (+)
smyd2b smyd2,LOC103360985 coding downstream 257232 19260262 ~ 19269398 (+)
LOC120546239 NA coding downstream 324977 19328007 ~ 19333616 (+)
G185495 daam1,LOC108240128 non-coding upstream 169800 18819084 ~ 18821146 (+)
G185471 NA non-coding upstream 285712 18703965 ~ 18705234 (+)
LOC120546607 NA non-coding upstream 300913 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 345792 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 350565 18636374 ~ 18640381 (+)
G185589 NA non-coding downstream 11696 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 19666 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 21234 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 40194 19043224 ~ 19043548 (+)
G185593 NA non-coding downstream 42384 19045414 ~ 19046107 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 278952 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 355894 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 850686 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 936020 18020956 ~ 18054926 (+)
G185237 NA other upstream 1073698 17916853 ~ 17917248 (+)
LOC120546624 prox1 other downstream 201124 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 351586 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 364690 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 426565 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 569543 19572573 ~ 19620783 (+)

Expression


Co-expression Network