clu (clu,LOC102791322)


Basic Information

Item Value
gene id clu
gene name clu,LOC102791322
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 25888269 ~ 25901582 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781267.1
CGGCGGCGGGCAGCATGAACCACATGTCTGCACCGTCCCAGTTATCCGCTGGTATAAATACGAGCAGCAGAGAGACTGGAGCAGCTTCAGACGGTCTGGAGTCTCAGGAAACAAACAGAGttgtttttttcatcattgCCCGCTGGCCCTGTGAGAGTCAGAGAGGAtgttaatgatgatgatgatgatgaagaagaagGGGTCCAAGTTTCTGGCCGTGGTGGCTCTTCTTCTGGCCTCAGCCAACTGTATCCTCCTTCCATCAAAAGAAGATCTTACCCagatCTCACTCCTGGGAGAAAAGTATCTGGATAAACAGATTGAAAACGCCGTTAACGGAGTGAAGGAGATGAAGAGCGTGATGCAGAAATCTTCAGAGGAACACCAGAAGTTTCTGGATGCCCTGGAGAAAACAAAGGAGCAGAAAGAGGAAGCGTTGCGCGTGGCTAAGGAGAAGGAGGCCAAGCtggagcaggaagaggaggTTTGTAACGAGACCATGACGGCCCTGTGGGAGGAGTGTAAGCCCTGCCTGAAGAACACCTGCGTTAAATACTACTCCCGAACCTGCAGCAGTGGATCTGGACTGGTGGGACGCCAGCTGGAGGAGGTGCTCAACAGAACGTCTCCCTTCTCCATCTGGATCAACGGGGAGAATATAGACGTCCTGCAGCAAGAGGGGCAGCGGCAGAGCAAAGAGCTCAGGAACCTGGAGGAAAAATACTCCGAGATGGCCGACGGCGTGGACAGCATATTTTCAGACAGCATGAAGGTGGCTGATCACGTGCACTACAACCCTCCAGTGTTCTTTTTTCCCAACTTCCTGGGGCCGTACACTCGCCGGAGCAGAAGCGTTCACTCTCTCTTCCACAATCCGTTCCACGGCTTCCAGGATTTGTTCTCCCCCATGAAGGACATGAGCAGGAACTTCTTCAGCTCTATGGGCTCCATGATGGACATCGACTCAGACGCAGCTCCTAATGAAGtggctagagctggcagaggagACGGCAGTGTGAACGAGGACGTGGTCATCACCAAACCGTTTGGCAACGGCAGGATGACCTGCAGAGAGATTCGCCGCAACTCGGCCGGCTGCCTCAAGTTCCGCGAAGAGTGTCAGAAATGCAAAGAGATCCAGCATATTGACTGCTCCGGGAAGAGACCTCTGGAGGGCCCGCTGAagcaggagctggaggaggcgCTGGCCATGGCCGAGCGCTTCACTCAGCAGTACAACAGCCTCCTGAAGACGTTCGAGGAGAAGATGTTCAACACCTCCTCCATCCTGGACCTGCTCAACAGAGAGTTCGGCTGGGTGTCATCTCTGGCCAACAACACCAACACCAAGGACGACATCTTCCGGGTTCAGACGGTGGACAGCAGGGACACTGAAGAGAAGCCCAGTGAGGGGGAGAAGAAGCAGCCTGGAGAAACAGACGTGTCTGTGCAGCTCTTCGACAATCCACCCATGACCTTTAGCGTGCCGGGCGACATCCCCTGGACCGACCCCAAGTTCTCTGAGGTGGTGGCCCAGAAGGCTCTGGACCGCTACAAGGAAACCAGCGTtgtggttaAATAAGGTCCCAACCTGCGCTGTCTGCTGACAAGTGAATGTTCTGAATTTCTCAAAAACACACccggggggaaaaaaacctgAAGCCAACACACTGATTCTGTTGTAAATCCTCCAAGTCCTGCTTTTGCAAATGATACAGTTTAACCTCAGATATTTATATTGTTACATTAGAGCTCTTTGTCCTGCTGTAAGAGAAGATATTCAGTAGATGTAGATAGCAGGCCTTGTATCATATGTGAGCTGGGCTTTTGCAAAAAAAGGAGCCATAGGACTTCTGCTTGAGTTTCTGTTAAAAGCCAAAATATATGTAATTGGCTCTAAAAGGGTTTATTCTCTACATTCAGACTTTCTAACACATGCAGATTAAACTGATATTTCCTCCACCTCAGTTCAATGAAATAGAGATTTGGTTTGTTGCAAAGATTTGTGGTTAAAGTAAAAGTTTAGAGTGAGTAAATTTAAGCGGTTTAAGTGACTTCCCTTCTACAGATCTGTGATCATCTGTTATCTGAGTTGAGTTGGTTTGCAGGAGTTAAATTCACTGATTGGAGAGATTAAAGTTAGGAAATAAGAAGTTGATTATGTTAAGGTTTGCTTTGAGCCCCTCTGTACAACAGTAACAATGAAGCAATGCATACAGATCTAATAAAAACCTGCTCAAACCCA
>XM_039781268.1
CGGCGGCGGGCAGCATGAACCACATGTCTGCACCGTCCCAGTTATCCGCTGGTATAAATACGAGCAGCAGAGAGACTGGAGCAGCTTCAGACGGTCTGGAGTCTCAGGAAACAAACAGAGttgtttttttcatcattgCCCGCTGGCCCTGTGAGAGTCAGAGAGGAtgttaatgatgatgatgatgatgaagaagaagGGGTCCAAGTTTCTGGCCGTGGTGGCTCTTCTTCTGGCCTCAGCCAACTGTATCCTCCTTCCATCAAAAGAAGATCTTACCCagatCTCACTCCTGGGAGAAAAGTATCTGGATAAACAGATTGAAAACGCCGTTAACGGAGTGAAGGAGATGAAGAGCGTGATGCAGAAATCTTCAGAGGAACACCAGAAGTTTCTGGATGCCCTGGAGAAAACAAAGGAGCAGAAAGAGGAAGCGTTGCGCGTGGCTAAGGAGAAGGAGGCCAAGCtggagcaggaagaggaggTTTGTAACGAGACCATGACGGCCCTGTGGGAGGAGTGTAAGCCCTGCCTGAAGAACACCTGCGTTAAATACTACTCCCGAACCTGCAGCAGTGGATCTGGACTGGTGGGACGCCAGCTGGAGGAGGTGCTCAACAGAACGTCTCCCTTCTCCATCTGGATCAACGGGGAGAATATAGACGTCCTGCAGCAAGAGGGGCAGCGGCAGAGCAAAGAGCTCAGGAACCTGGAGGAAAAATACTCCGAGATGGCCGACGGCGTGGACAGCATATTTTCAGACAGCATGAAGGTGGCTGATCACGTGCACTACAACCCTCCAGTGTTCTTTTTTCCCAACTTCCTGGGGCCGTACACTCGCCGGAGCAGAAGCGTTCACTCTCTCTTCCACAATCCGTTCCACGGCTTCCAGGATTTGTTCTCCCCCATGAAGGACATGAGCAGGAACTTCTTCAGCTCTATGGGCTCCATGATGGACATCGACTCAGACGCAGCTCCTAATGAAGACGGCAGTGTGAACGAGGACGTGGTCATCACCAAACCGTTTGGCAACGGCAGGATGACCTGCAGAGAGATTCGCCGCAACTCGGCCGGCTGCCTCAAGTTCCGCGAAGAGTGTCAGAAATGCAAAGAGATCCAGCATATTGACTGCTCCGGGAAGAGACCTCTGGAGGGCCCGCTGAagcaggagctggaggaggcgCTGGCCATGGCCGAGCGCTTCACTCAGCAGTACAACAGCCTCCTGAAGACGTTCGAGGAGAAGATGTTCAACACCTCCTCCATCCTGGACCTGCTCAACAGAGAGTTCGGCTGGGTGTCATCTCTGGCCAACAACACCAACACCAAGGACGACATCTTCCGGGTTCAGACGGTGGACAGCAGGGACACTGAAGAGAAGCCCAGTGAGGGGGAGAAGAAGCAGCCTGGAGAAACAGACGTGTCTGTGCAGCTCTTCGACAATCCACCCATGACCTTTAGCGTGCCGGGCGACATCCCCTGGACCGACCCCAAGTTCTCTGAGGTGGTGGCCCAGAAGGCTCTGGACCGCTACAAGGAAACCAGCGTtgtggttaAATAAGGTCCCAACCTGCGCTGTCTGCTGACAAGTGAATGTTCTGAATTTCTCAAAAACACACccggggggaaaaaaacctgAAGCCAACACACTGATTCTGTTGTAAATCCTCCAAGTCCTGCTTTTGCAAATGATACAGTTTAACCTCAGATATTTATATTGTTACATTAGAGCTCTTTGTCCTGCTGTAAGAGAAGATATTCAGTAGATGTAGATAGCAGGCCTTGTATCATATGTGAGCTGGGCTTTTGCAAAAAAAGGAGCCATAGGACTTCTGCTTGAGTTTCTGTTAAAAGCCAAAATATATGTAATTGGCTCTAAAAGGGTTTATTCTCTACATTCAGACTTTCTAACACATGCAGATTAAACTGATATTTCCTCCACCTCAGTTCAATGAAATAGAGATTTGGTTTGTTGCAAAGATTTGTGGTTAAAGTAAAAGTTTAGAGTGAGTAAATTTAAGCGGTTTAAGTGACTTCCCTTCTACAGATCTGTGATCATCTGTTATCTGAGTTGAGTTGGTTTGCAGGAGTTAAATTCACTGATTGGAGAGATTAAAGTTAGGAAATAAGAAGTTGATTATGTTAAGGTTTGCTTTGAGCCCCTCTGTACAACAGTAACAATGAAGCAATGCATACAGATCTAATAAAAACCTGCTCAAACCCA

Function

symbol description
clu Predicted to enable misfolded protein binding activity. Acts upstream of or within regulation of neuron death. Predicted to be located in several cellular components, including chromaffin granule; endoplasmic reticulum; and mitochondrial membrane. Predicted to be active in extracellular space and nucleus. Is expressed in several structures, including digestive system; male organism; nervous system; notochord; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in artery disease (multiple); breast cancer; diabetic retinopathy; exfoliation syndrome; and muscular disease (multiple). Orthologous to human CLU (clusterin).

NR:

description
clusterin

GO:

id name namespace
GO:0008219 cell death biological_process

KEGG:

id description
K17252 CLU; clusterin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781267.1 True 2245 mRNA 0.49 11 25888269 25901582
XM_039781268.1 False 2224 mRNA 0.49 10 25888269 25901582

Neighbor

gene id symbol gene type direction distance location
LOC120546553 NA coding upstream 51837 25830950 ~ 25836432 (+)
fmn1 fmn1 coding upstream 78347 25780782 ~ 25809922 (+)
aven NA coding upstream 237706 25609997 ~ 25650563 (+)
emc7b emc7 coding upstream 283535 25597678 ~ 25604734 (+)
katnbl1 katnbl1 coding upstream 291560 25589228 ~ 25596709 (+)
heca heca coding downstream 35719 25937301 ~ 25949410 (+)
knl1 NA coding downstream 68816 25970398 ~ 25992873 (+)
jag2b jag2,LOC107377795 coding downstream 145890 26047472 ~ 26102398 (+)
esr2a LOC103368808 coding downstream 237827 26139409 ~ 26159436 (+)
hadhb hadhb coding downstream 396744 26298326 ~ 26310715 (+)
G187310 NA non-coding upstream 361397 25526447 ~ 25526872 (+)
G187299 LOC104926707,LOC100302438 non-coding upstream 447726 25405717 ~ 25440543 (+)
G187301 thbs1,LOC104926707 non-coding upstream 453963 25434001 ~ 25434306 (+)
G187260 NA non-coding upstream 549003 25338845 ~ 25339266 (+)
G187241 max,susd6,LOC103359378,LOC102235228,LOC107988062 non-coding upstream 580870 25261835 ~ 25307399 (+)
G187378 NA non-coding downstream 1356 25902938 ~ 25905402 (+)
G187431 NA non-coding downstream 65424 25967006 ~ 25967300 (+)
LOC120547280 NA non-coding downstream 346196 26247778 ~ 26249685 (+)
G187508 NA non-coding downstream 370786 26272368 ~ 26272595 (+)
G187535 NA non-coding downstream 413540 26315122 ~ 26315654 (+)
trnat-ugu_3 NA other upstream 668329 25219868 ~ 25219940 (+)
lama2 lama2,LOC104942190 other upstream 878812 24810079 ~ 25009457 (+)
G187094 bpnt1,LOC102799416 other upstream 1380456 24506913 ~ 24507813 (+)
extl3 extl3 other upstream 1700405 24155487 ~ 24187864 (+)
LOC120547070 NA other upstream 1741507 24144997 ~ 24146762 (+)
abracl abracl,LOC103376263 other downstream 27994 25929576 ~ 25935271 (+)
LOC120546493 NA other downstream 53668 25955250 ~ 25968925 (+)
nudt14 nudt14,LOC107560374 other downstream 105272 26006854 ~ 26036232 (+)
atp5mj NA other downstream 355893 26257475 ~ 26260895 (+)
gareml garem2 other downstream 363607 26265189 ~ 26283008 (+)

Expression


Co-expression Network