ccnk (ccnk)


Basic Information

Item Value
gene id ccnk
gene name ccnk
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12695937 ~ 12703184 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781288.1
ACGTGTATCAGATGTCCTGCGTAATGACGTCTGCCAACAGTGTCTAACGTACTCCATAATGGCGGTGCCCTTTACAATGGGAATTGTTGTGGATCACTTGTTAGCCAACTTCTTGTGAATAACTGCGGATTATTCACACACCTGTCTGTTTTGGGTAATTTACTCCGACGGCTACATGTTAAAGTCCGGTGCAGCGGGTCCATCCACCGTTGCCTCTCCTCAGCCAATGAAGGAATTCAAGGAGAACTTTTCAGGCCAACTAATCCTGGACCACATCAAGCCATGCTGGTACTGGGACAAGAAGGATTTAGCCCACACCCCCTCTCAGTCTGAAGGCCTGGACCCTGGCACAGAGGCCCGGTATCGGAGAGAAGGAGCCCGCTTCATTTTTGACGTGGGGACCAGACTTGGCCTACACTATGACACACTGGCAACTGGCATCATATACTTCCACCGCTTCTACATGTTTCACTCCTTTAAGCAGTTCCCCAGATATGTGACGGGTGCTTGCTGTCTTTTCCTGGCGGGCAAAGTGGAGGAAACCCCAAAGAAGTGTAAAGACATCATCAAAACAGCCCGCAGTTTACTGAATGATGTGCAGTTTGCCCAGTTTGGAGATGATCCGAAGGAAGAGGTGATGGTGCTGGAGAGAATTTTACTCCAGACCATCAAGTTTGACCTGCAGGTGGAGCACCCTTACATGTTCCTGCTGCGCTACGTCAAGCAACTCAAAGGGGAAAAGAATAAAGTGTGCAAGGTGCTACAGATGGCATGGACCTTTGTCAATGACAGCCTGTGCACCATGCTGTCTCTGCAGTGGGAACCAGAGATTATTGCGGTAGCTGTCATGTACCTGGCCGGCCGCCTCTGCAAGTTTGACATCCAGGAGTGGACCGCCAAGCAGTCGTCCCGCCGCTGGTGGGAGCAGTTTGTCCAGGACGTCCCAGTTGAGCTGCTGGAAGACATTTGCCACCAGATCCTGGATCTGTACTCCCAGGGAAACAAGCCCATCCCTCAGCAGatacaggagaaggagagggccGCTGCTCCGCAGGTCCCCGTTCCTCCAGCCCCAGTGGGACTACCACCAGCCCCCAAccctcctcccccaccaccGAAGAAGACTTCCCCTCAGGGAAGCAGCCCTGCACGCCCGCTCAAACGCTCACATacATCCCCAAAAGATGAACCAAAGGCTCCAGAACAAGTTGGCTCAAAGATTCCTAGACTGGAGAGCCCCATGCCCCCTCTGCCTACATCGCAGCCTCCCCCAGAGCGCAAAGCCCCAGCTCCAGCCCCTCCCACGGAAGCCGAACCGCTGCCGGAAACGGCTCCTCCTCCGCCGCACGGTCCACCTCCGCATCAGCCCCCGCCCCTGCCCCATCGCCCTCCGCCGCCCCCGCCCTCCAACTACATCATGTCCACCACCAGCTCCTACATGTCCGGAGAAGGCTACCAGAGCCTGCAGTCGATGATGAAGACGGAGGGTCCCTCCTACGCCCCGATGCCGCCCAGCTACGCACCCCCGATACCGCCGTACCACGTCTACCCACCGCCTGCGGCGCCGCCTCCGGGCCCCCCTCCTTCCAGCTACCCGCCCCCCAACCTGGCGCCGGCGTATCCGCCGCCGGGCTACAACAGCTACCCTCCGCCTCGCATGCCGCCGGGCCACGTACCCCCTCCAGTCATAGGTCTGCCCGCTGGGTATCCTCCGCCCCCCGTGCCCCCGGGACAGTCGCAGGTACCCCTGCCCCCTCCGCCCGGCATGCCTATGAATCACGGCGGGTGGATGAGGTGAGAGTGAAACAACAGTCGGTAAACGGGACTCGGTGCAGCACGGTAGAACCAACCAGGAACTGGTGTTAATCGGCTGGTACAGACGGAGAGCTCGTTCACCTCCAGTGTGACTTTTGTCGATGAGGTCCTTAATGAAGGCTTAACAACAAATAGACtcgaaaaatgaaaaaaaagtgagttCCGGACAGTATTGTTATGAGAACCTGAACTGACACTGAAAGACTGCAGTCTCAGTGGCTTAACCACGTCCAGGATGGTACTTGTAGTTCCAGGATCTTGTAACAAACACTGTCCACTCGTCGTCGTCGTTCTGGAAATGTAGCCGGAAATATTAGCACCCTGAAGCTAGTTTTGTCACACACGCTCATTCATTTCTTGTGGGGTGATGAGATGTTCtgtgttttttacttttacctTTTTGTTGAGTAGAACAAAGATTGACTCTTATCTTTCCTTTCTATATTCTTTCACcctgattgttttatttttttttcctgaatttGCAGTCCTACCAGTGTCCTTTTCCCCTGcagtcttgtttttcttttctcgaCATTCCCACTGTTTAGCTGAGAGGAAAACAAATGCATAATAAAATCTTGATGGTTGTACCTGCAGTAGTCAAAAATAAAAGGACTGTCACACTTGAGACATGTTATTAAATAGTTCTTTGAAACGTGCTGTATATCCTTTTTGTCATTACTTTCTATTCTGTGAAAACACAGGTCATGTAAGATATTTCTGCTACCATAGTTGATTTTTATTGTACTGTCACACTGTCTCCCTGTTTTGTGTGAATGTGCACAGCAGACAGTATTACACGTAGAAACCCTGTCATCAAACGCACCATGTCTAACACTGGACAGACTAAGGTATATTTGTACATAtctgttcttttcatttagGCATATTGTTTTGAGAGTTTCAGTCCATATGTGCCTTAGTCAGGCTTCTCTTTTCTGTATCCGGCACGCGGCTTTGGTTTTGTGTCCGAGTGGCATTTATGACAATAAAGACCTGCTTTTCCTACTTTGAA
>XM_039781289.1
CGAACAGACGGACGATAATCGAGCTGAATTCGAACTAGTTTTGACTGGGCGCAGTGCTCCTAGCCTTAGCGGTGTGCAGACCTCGAGCAAAGCAAGTTTTGCTAGCCGAGGCTGCTAGCGAAGAGTAGGACTTGGTCGGCCTGACGCTAGCTGTCATCTGTCTTTATTTCAAATCCGGTGCAGCGGGTCCATCCACCGTTGCCTCTCCTCAGCCAATGAAGGAATTCAAGGAGAACTTTTCAGGCCAACTAATCCTGGACCACATCAAGCCATGCTGGTACTGGGACAAGAAGGATTTAGCCCACACCCCCTCTCAGTCTGAAGGCCTGGACCCTGGCACAGAGGCCCGGTATCGGAGAGAAGGAGCCCGCTTCATTTTTGACGTGGGGACCAGACTTGGCCTACACTATGACACACTGGCAACTGGCATCATATACTTCCACCGCTTCTACATGTTTCACTCCTTTAAGCAGTTCCCCAGATATGTGACGGGTGCTTGCTGTCTTTTCCTGGCGGGCAAAGTGGAGGAAACCCCAAAGAAGTGTAAAGACATCATCAAAACAGCCCGCAGTTTACTGAATGATGTGCAGTTTGCCCAGTTTGGAGATGATCCGAAGGAAGAGGTGATGGTGCTGGAGAGAATTTTACTCCAGACCATCAAGTTTGACCTGCAGGTGGAGCACCCTTACATGTTCCTGCTGCGCTACGTCAAGCAACTCAAAGGGGAAAAGAATAAAGTGTGCAAGGTGCTACAGATGGCATGGACCTTTGTCAATGACAGCCTGTGCACCATGCTGTCTCTGCAGTGGGAACCAGAGATTATTGCGGTAGCTGTCATGTACCTGGCCGGCCGCCTCTGCAAGTTTGACATCCAGGAGTGGACCGCCAAGCAGTCGTCCCGCCGCTGGTGGGAGCAGTTTGTCCAGGACGTCCCAGTTGAGCTGCTGGAAGACATTTGCCACCAGATCCTGGATCTGTACTCCCAGGGAAACAAGCCCATCCCTCAGCAGatacaggagaaggagagggccGCTGCTCCGCAGGTCCCCGTTCCTCCAGCCCCAGTGGGACTACCACCAGCCCCCAAccctcctcccccaccaccGAAGAAGACTTCCCCTCAGGGAAGCAGCCCTGCACGCCCGCTCAAACGCTCACATacATCCCCAAAAGATGAACCAAAGGCTCCAGAACAAGTTGGCTCAAAGATTCCTAGACTGGAGAGCCCCATGCCCCCTCTGCCTACATCGCAGCCTCCCCCAGAGCGCAAAGCCCCAGCTCCAGCCCCTCCCACGGAAGCCGAACCGCTGCCGGAAACGGCTCCTCCTCCGCCGCACGGTCCACCTCCGCATCAGCCCCCGCCCCTGCCCCATCGCCCTCCGCCGCCCCCGCCCTCCAACTACATCATGTCCACCACCAGCTCCTACATGTCCGGAGAAGGCTACCAGAGCCTGCAGTCGATGATGAAGACGGAGGGTCCCTCCTACGCCCCGATGCCGCCCAGCTACGCACCCCCGATACCGCCGTACCACGTCTACCCACCGCCTGCGGCGCCGCCTCCGGGCCCCCCTCCTTCCAGCTACCCGCCCCCCAACCTGGCGCCGGCGTATCCGCCGCCGGGCTACAACAGCTACCCTCCGCCTCGCATGCCGCCGGGCCACGTACCCCCTCCAGTCATAGGTCTGCCCGCTGGGTATCCTCCGCCCCCCGTGCCCCCGGGACAGTCGCAGGTACCCCTGCCCCCTCCGCCCGGCATGCCTATGAATCACGGCGGGTGGATGAGGTGAGAGTGAAACAACAGTCGGTAAACGGGACTCGGTGCAGCACGGTAGAACCAACCAGGAACTGGTGTTAATCGGCTGGTACAGACGGAGAGCTCGTTCACCTCCAGTGTGACTTTTGTCGATGAGGTCCTTAATGAAGGCTTAACAACAAATAGACtcgaaaaatgaaaaaaaagtgagttCCGGACAGTATTGTTATGAGAACCTGAACTGACACTGAAAGACTGCAGTCTCAGTGGCTTAACCACGTCCAGGATGGTACTTGTAGTTCCAGGATCTTGTAACAAACACTGTCCACTCGTCGTCGTCGTTCTGGAAATGTAGCCGGAAATATTAGCACCCTGAAGCTAGTTTTGTCACACACGCTCATTCATTTCTTGTGGGGTGATGAGATGTTCtgtgttttttacttttacctTTTTGTTGAGTAGAACAAAGATTGACTCTTATCTTTCCTTTCTATATTCTTTCACcctgattgttttatttttttttcctgaatttGCAGTCCTACCAGTGTCCTTTTCCCCTGcagtcttgtttttcttttctcgaCATTCCCACTGTTTAGCTGAGAGGAAAACAAATGCATAATAAAATCTTGATGGTTGTACCTGCAGTAGTCAAAAATAAAAGGACTGTCACACTTGAGACATGTTATTAAATAGTTCTTTGAAACGTGCTGTATATCCTTTTTGTCATTACTTTCTATTCTGTGAAAACACAGGTCATGTAAGATATTTCTGCTACCATAGTTGATTTTTATTGTACTGTCACACTGTCTCCCTGTTTTGTGTGAATGTGCACAGCAGACAGTATTACACGTAGAAACCCTGTCATCAAACGCACCATGTCTAACACTGGACAGACTAAGGTATATTTGTACATAtctgttcttttcatttagGCATATTGTTTTGAGAGTTTCAGTCCATATGTGCCTTAGTCAGGCTTCTCTTTTCTGTATCCGGCACGCGGCTTTGGTTTTGTGTCCGAGTGGCATTTATGACAATAAAGACCTGCTTTTCCTACTTTGAA

Function

symbol description
ccnk Predicted to enable cyclin-dependent protein serine/threonine kinase activator activity. Acts upstream of or within central nervous system development. Predicted to be part of cyclin/CDK positive transcription elongation factor complex. Predicted to be active in nucleus. Is expressed in central nervous system. Orthologous to human CCNK (cyclin K).

NR:

description
PREDICTED: cyclin-K isoform X2

GO: NA

KEGG:

id description
K23326 CCNK; cyclin K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781288.1 True 2833 mRNA 0.52 11 12695937 12703184
XM_039781289.1 False 2822 mRNA 0.52 11 12695937 12702980

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_2 NA coding downstream 112696 12583169 ~ 12583241 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding downstream 337706 12027548 ~ 12358231 (-)
tshr tshr coding downstream 777796 11893534 ~ 11918141 (-)
kcnk13b kcnk13,LOC106526329 coding downstream 1022848 11659994 ~ 11673089 (-)
LOC120547092 psmc1 coding downstream 1045877 11638846 ~ 11650060 (-)
LOC120546273 NA coding upstream 43202 12746386 ~ 12747738 (-)
LOC120547205 NA coding upstream 243774 12946958 ~ 12948322 (-)
LOC120547206 NA coding upstream 253289 12956473 ~ 12957811 (-)
LOC120547207 NA coding upstream 275479 12978663 ~ 12979999 (-)
LOC120547210 NA coding upstream 287391 12990575 ~ 12991921 (-)
G183910 NA non-coding downstream 65145 12588138 ~ 12630792 (-)
G183908 NA non-coding downstream 69231 12592618 ~ 12626706 (-)
G183898 NA non-coding downstream 136162 12540583 ~ 12559775 (-)
G183875 snw1,LOC102781075 non-coding downstream 174183 12518372 ~ 12521754 (-)
G183872 NA non-coding downstream 190922 12504685 ~ 12505015 (-)
G183952 NA non-coding upstream 137848 12841032 ~ 12922807 (-)
LOC120546274 NA non-coding upstream 181186 12884370 ~ 12885775 (-)
G183981 NA non-coding upstream 331068 13034252 ~ 13034497 (-)
G184026 NA non-coding upstream 546407 13249591 ~ 13250436 (-)
G184049 NA non-coding upstream 615304 13318488 ~ 13318930 (-)
G183650 NA other downstream 1321322 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 2085312 10455244 ~ 10610625 (-)
G183528 NA other downstream 2174527 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 2594876 10099478 ~ 10101061 (-)
G183176 NA other downstream 3562465 9129573 ~ 9133472 (-)
ost4 NA other upstream 204118 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 257314 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 442280 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 552701 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 755418 13458602 ~ 13468065 (-)

Expression


Co-expression Network