LOC120546378


Basic Information

Item Value
gene id LOC120546378
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8549179 ~ 8550180 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781305.1
ATGGAACCAGACGTGACTGTCAATGGGACTTACACTGTTAATGGCATACATCCCTGCTATGAATCTGCTAATACAAGTTATGTATTTACAAGCAACCCTTCCATAGTATGTGTATTAGTATATATTTTCCTTGGTATACTATCTGTCGCCACAATATGTGGAAACCTTCTTGTCATAATCTCCATCATTTACTTCAAAGAGCTCCATACTCCTACAAACTACCTTATTCTGTCTCTGGGTGTGGCTGACCTGCTTGTAGGAGTTTTAGTTTTTCCTTTTAGCATGGCATTCACTGTAAGCTCATGTATGTATCATGAACATGTATTATGTAAAATACGAGACAGCTTTGATGTATCACTGTGTACATCTTCTATTCTAAACTTGTGTTGTATTTCTATTGACAGATATTATGCTGTGTGTCAGCCTCTTACCTATAGAACTAAAATAAATGTTCACGTAACTGTGGTTATGATCCTTGTGACTTGGGGGGTTTCTGTTCTAATTGGAATTGGCATCATAATTGCAGGATTCAGCCAAGGAGCATGTGAAGGGATGTGCTCGGTTGATGTTGTAATGGCAAACACTATTGGACCTGTTCTCTCATTTTACCTCCCAGCGATCATAATGCTCTGTATCTACCTGAAGATTTTCCTTGTTGCTAAGAAACAGGTGAACAGCATCCAGAACACAACGTGTCAGAGCACAAAGTCTGGAGCAACTGTCAGTAAGATGGAGAGAAAGGCTACCAAAACTCTGGCTATAGTAATGGGagtttttcttttatgtttGACTCCTTATTTTCTTTGTATTGTCTTTCAGCCTTTATCTTATAATCCTCCACCAGTTGCTGTGATTGAAACCCTCAACTGGCTTACACTATCAAATTCAACGCTCAATCCCTTTATTTATGCTTTCTTTTACAGCTGGTTCAGATCAGCTTTCAAAATGATAATTTCAGGAAAAATATTTCAAGGTGATTTTGCAAACTCAAAAttgttttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781305.1 True 1002 mRNA 0.38 1 8549179 8550180

Neighbor

gene id symbol gene type direction distance location
LOC120546734 cd2ap coding downstream 208432 8251716 ~ 8340747 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding downstream 961114 7444861 ~ 7588065 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding downstream 1748386 6762711 ~ 6800793 (-)
LOC120546794 NA coding downstream 2084377 6462940 ~ 6464802 (-)
LOC120546792 LOC104959018 coding downstream 2475959 6070546 ~ 6073220 (-)
LOC120546379 LOC103375580 coding upstream 8289 8558469 ~ 8559470 (-)
LOC120546380 NA coding upstream 14963 8565143 ~ 8566141 (-)
LOC120546382 NA coding upstream 22223 8572403 ~ 8573320 (-)
LOC120546383 NA coding upstream 37162 8587342 ~ 8588259 (-)
LOC120546385 NA coding upstream 54504 8604684 ~ 8605599 (-)
G183042 NA non-coding downstream 69833 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 117505 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 303414 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 357705 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 501241 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 221108 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 448395 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 548191 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 576541 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 583356 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 422515 8049458 ~ 8126664 (-)
G182977 NA other downstream 524135 8024715 ~ 8025044 (-)
G182952 NA other downstream 782793 7761565 ~ 7766386 (-)
G182764 NA other downstream 1848062 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2280036 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 231148 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 470780 9020960 ~ 9024565 (-)
G183176 NA other upstream 579393 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1549298 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1905064 10455244 ~ 10610625 (-)

Expression


Co-expression Network