LOC120546380


Basic Information

Item Value
gene id LOC120546380
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8565143 ~ 8566141 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781307.1
ATGGATATGGGAATCAGCATTAACAGGACTAATGATCTTACTGTGATACATCCCTGCTATAAAATAGATGCCTCTTCCGTACTGACAAGCAACCCTTCCGGAATATGTGTATTGTTACATATTTTCCTTGGCTCATTATCTGTTGTAACTGTATGTGGAAACCTTGTTGTAATAATCTCCATCATTTACTTCAAACAGCTCCACACTCCTACTAACTACCTtattctctctctggctgtggCTGACCTGCTTGTTGGCTTTTTGGTCATTCCTCTCACCATGGAATTCTCAGAAACATTATGTCTGTACTATGAAGGTTTATTTTGTGAAGTACGGAGCACCGTTGATGTATCGCTGTGCACATCTTCTATTCTGCACCTGTGTTGTATTTCTATTGACAGATATTATGCAGTGTGTCAGCCTCTGACCTATAGaactaaaataaatgatcatgtTGCTGTCATCATGATCTTGGTTAGTTGGGGGGTTTCTGTCGTAATTGTAATTAGCTTCATAATTGTAGGAATAAACCAAGAAAAGTGTGCCGCAACATGTTTAATTAATGCTATAATGGCAAACATTTTTGGacttattttctcattttacctCCCAGTGATTCTAATGCTGTGTATCTACTTTAAGATTTTCCTTGTTGCACAGAAACAGGCACGCAGCATCCAGAACACAACCTGTCCGAGCAAAACGTCTGGAGCAACTGTCAGTAAGAATGAAAGGAAAGCCACCAAAACTCTGGCTATCGTTATGGGATTCTTTTTGATTTGTTggcttcctttctttctttgtacTACCGTTCGTTCTTTCAGTCATGTCTATGTGCCACTTCCTTTGATTGAATTACTTAACTGGCTTGCAGTGTCAAATTCAATGCTCAATCCATTTATTTATGCTTTCTTTTACAGCTGGTTCAGATCAGCTTTTAGAATGATAATTTCTGggaaaataattcaagatgATTTTACCAACTCAAAACTGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781307.1 True 999 mRNA 0.38 1 8565143 8566141

Neighbor

gene id symbol gene type direction distance location
LOC120546379 LOC103375580 coding downstream 5673 8558469 ~ 8559470 (-)
LOC120546378 NA coding downstream 14963 8549179 ~ 8550180 (-)
LOC120546734 cd2ap coding downstream 224396 8251716 ~ 8340747 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding downstream 977078 7444861 ~ 7588065 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding downstream 1764350 6762711 ~ 6800793 (-)
LOC120546382 NA coding upstream 6262 8572403 ~ 8573320 (-)
LOC120546383 NA coding upstream 21201 8587342 ~ 8588259 (-)
LOC120546385 NA coding upstream 38543 8604684 ~ 8605599 (-)
LOC120546386 NA coding upstream 53618 8619759 ~ 8623728 (-)
LOC120546387 NA coding upstream 85117 8651258 ~ 8652127 (-)
G183042 NA non-coding downstream 85797 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 133469 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 319378 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 373669 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 517205 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 205147 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 432434 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 532230 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 560580 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 567395 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 438479 8049458 ~ 8126664 (-)
G182977 NA other downstream 540099 8024715 ~ 8025044 (-)
G182952 NA other downstream 798757 7761565 ~ 7766386 (-)
G182764 NA other downstream 1864026 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2296000 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 215187 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 454819 9020960 ~ 9024565 (-)
G183176 NA other upstream 563432 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1533337 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1889103 10455244 ~ 10610625 (-)

Expression


Co-expression Network