LOC120546382


Basic Information

Item Value
gene id LOC120546382
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8572403 ~ 8573320 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781309.1
ATGAAAGGCAACCCTTCTGcaatgtgtgttttattgtatattttcctTGGCTCATTATCTGTTGTCACAGTATGTGGAAACCTTCTTGTAATAATCTCCATAATCTATTTCAAACAGCTCCACAGTCCTACTaactctctcattctctctctggctgtggCTGACCTGCTTgttggtgttgtagtttttcctgTCAGCATGGCATTTACTGTAACCTcgtgtttttattataaaaatatattttACAGATATTATGCAGTGTGTCAGCCTCTGATGTACAGAACTAAGATAAATGTTAACGTTGTCATGGTCATGATCCTGCTCAGCTGGGGTGTTTCTGTTCTAATTGCCATTGGCTTTATGATTCCAgatttaaaacatgaaaaatgtgaAGAAAATTGTTTTATTGATGCCCTACTTGCAAACATTTTGGGACCCGTCTTCGCATTTTATCTACCAGTGATTGTAATGCTCTGTATCTACCTAAAGATTTTCCTTGTTGCACAGGAACAGGTACGCAGCATCCAGAATAACACCTGTCAGAGTAAAAAGTCTGGAGCAACTGTCAGTAAGATGGAGAGAAAGGCCACTAAAACTCTTGCGACCGTTTTGGGAGTTTTCCTGATGTGTTGGactcctttctttctctgttttatcTCTCAGCTTTTGCCCCATGTGTCAGTGCCACTTCCATTGTTTGAAACACTTAACTGGCTTGCACTGTTAAACTCCATGCTCAAtccatttatttatgcattCTTTTACAGCTGGTTCAGATCAGCTTTCAGAATGATCGTTTCTGGGAAAATATTTCAAGGTGATTTTTctaacacaaaactgctttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781309.1 True 846 mRNA 0.39 2 8572403 8573320

Neighbor

gene id symbol gene type direction distance location
LOC120546380 NA coding downstream 6262 8565143 ~ 8566141 (-)
LOC120546379 LOC103375580 coding downstream 12933 8558469 ~ 8559470 (-)
LOC120546378 NA coding downstream 22223 8549179 ~ 8550180 (-)
LOC120546734 cd2ap coding downstream 231656 8251716 ~ 8340747 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding downstream 984338 7444861 ~ 7588065 (-)
LOC120546383 NA coding upstream 14022 8587342 ~ 8588259 (-)
LOC120546385 NA coding upstream 31364 8604684 ~ 8605599 (-)
LOC120546386 NA coding upstream 46439 8619759 ~ 8623728 (-)
LOC120546387 NA coding upstream 77938 8651258 ~ 8652127 (-)
LOC120546388 NA coding upstream 87123 8660443 ~ 8661312 (-)
G183042 NA non-coding downstream 93057 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 140729 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 326638 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 380929 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 524465 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 197968 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 425255 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 525051 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 553401 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 560216 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 445739 8049458 ~ 8126664 (-)
G182977 NA other downstream 547359 8024715 ~ 8025044 (-)
G182952 NA other downstream 806017 7761565 ~ 7766386 (-)
G182764 NA other downstream 1871286 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2303260 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 208008 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 447640 9020960 ~ 9024565 (-)
G183176 NA other upstream 556253 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1526158 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1881924 10455244 ~ 10610625 (-)

Expression


Co-expression Network