LOC120546390


Basic Information

Item Value
gene id LOC120546390
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8715565 ~ 8716434 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781317.1
ATGTTATTGTCTGTTATCACAATATGTGGAAACTTTCTTATTATAATCTCTGTATTGTATTTCCACCAGCTCCACACTCCTACTAACTACCTtattctctctctggctgtggCTGACCTGCTTGTTGGGATCATAGTCTTTCCTTTCAGCATGGCATTCTCATATAGCTCATGTCTGTATTATGAGGATTTATTTTACAGATATTATGCAGTGTGTCAGCCTCTGACCTATAGAACTAAAATAAACtattgtgttgttgtgattATGATTATGGTTAGCTGGGGGAGTTCTGCTCTAACTGCAATAGGCATCTTTTTTGCTGGATTAAACCATGATAAATGTGGGGAAAGGTGTTTCATTAATGTACTCATATTTCACAATATTGGAcctattttctcattttacctCCCAGTGATCATAATGCTCTGTATCTACCTGAAGATTTTCCTTGTTGCACAGAAACAGGCACGCAGCATCCAGAAAACAACCTGTCAGAGCAAAAAGTCTGGAGGAACTGTCAGTAAGAATGAGAGAAAGGCTACCAAAACTCTGGCTATTGTTTTaggagtttttattttattttggactcctttctttctttgtaacACTGTTATGCCTTACAGTAATGACCCAGTGCCAGTTCCTGTGTTTGAAACACTTGCCTGGCTTGCACTGTCAAACTCCATGCTCAATCCCTTTATTTATGCTTTCTTTTACAGCTGGTTCAGATCAGCTTTTAGAATGATCATTTCTGGGAAAATATTTCTTGGTGATTATACTAATTCTAAACTGTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781317.1 True 798 mRNA 0.37 2 8715565 8716434

Neighbor

gene id symbol gene type direction distance location
LOC120546389 NA coding downstream 38880 8675816 ~ 8676685 (-)
LOC120546388 NA coding downstream 54253 8660443 ~ 8661312 (-)
LOC120546387 NA coding downstream 63438 8651258 ~ 8652127 (-)
LOC120546386 NA coding downstream 91837 8619759 ~ 8623728 (-)
LOC120546385 NA coding downstream 109966 8604684 ~ 8605599 (-)
LOC120546393 NA coding upstream 6669 8723103 ~ 8740339 (-)
LOC120546396 NA coding upstream 51565 8767999 ~ 8769024 (-)
LOC120546398 NA coding upstream 73398 8789832 ~ 8790701 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding upstream 201079 8917513 ~ 8931493 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 219490 8935924 ~ 8950403 (-)
G183042 NA non-coding downstream 236219 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 283891 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 469800 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 524091 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 667627 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 54854 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 282141 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 381937 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 410287 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 417102 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 588901 8049458 ~ 8126664 (-)
G182977 NA other downstream 690521 8024715 ~ 8025044 (-)
G182952 NA other downstream 949179 7761565 ~ 7766386 (-)
G182764 NA other downstream 2014448 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2446422 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 64894 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 304526 9020960 ~ 9024565 (-)
G183176 NA other upstream 413139 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1383044 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1738810 10455244 ~ 10610625 (-)

Expression


Co-expression Network