LOC120546393


Basic Information

Item Value
gene id LOC120546393
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8723103 ~ 8740339 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781318.1
ATGTTATTGTCTGTTATCACAACATGTGGAAACTTTCTTGTTATAATCTCTGTATTTTATTTCCAACAGCTCCACACTCCTACTAACTACCTtattctctctctggctgtggCTGACCTGCTTGTTGGGATCATAGTCTTTCCTTTCAGCATGGCATTCTCATATAGCTCATGTCTGTATCATGAGGGTTTATTTTACAGATATTATGCAGTGTGTCAGCCTTTGACCTATAGAACTAAAataaacccttgtgttgttgtGATCATGATTCTCGTTAGCTGGGGGGTTTCTGCTCTAATTGCAATAACCATCACAATTGCTGGATTAAACAATGATAAATGTGGGGAAAGGTGTTTCATTGATGTACTCATAGCAAACACTATTGGACCTATTTTATCATTTTACCTCCCAGTGATCATAATGCTCTGTATCTACCTAAAGATTTTCCTTGTTGCACAGAAACAGGAACGCAGCATCCAGAACACAACCTGTCAGAGCAAAAAGTCTGGAGCAACTGTCAGTAAGAATGAGAGAAAGGCCTCCAAAACTCTGGCTATCGTTTTAGGAGTCTTTCTTTTATGTTGGactcctttctttctttgtatcACTGTTATGCCTTTCAGTAATGACCCAGTGCCAGTTCCTGTGTTTGAAACACTTGCCTGGCTTGCACTGTCAAACTCCATGCTCAATCCCTTTATTTATGCTTTCTTTTACAGCTGGTTCAGATCAGCTTTTAGAATGATCATTTCTGGGAAAATATTTAATGAAATTAAGGACGACTGGCCCTTTCTCTTCTCCTTGAAGGGCCTGTTCTTGCATTTCAGTGAGCTGACCGGAATTCCTATCCAGGAGAAGCTGCCAGCCGCCATAGACAACAGGAGTCAGAACATCATGGAGTACTTCAAACAGCAGAAGACACCAGGGGTGGGGAAGGTTCTGGAAGCCTACAATGAAGAGAGTGGCAACAAAGCTGTCTGCACCATCATGTGCCTGCTTGCTTACTTCAAAGAGGGGGATGGTATCTTCCTAACGGCTGATCCCTCTGCCACAGCTGCCGATATCGAGAGAGCTGTTACCCTGCCAAGCACACCTCGATTACTTGTACCAGGAGAGATACTGCACGGCGCAGACACATGGATTATGTCCATGGAAGGAGCATGTGTGATGGGGCCCCACAGCAACCTCCTGCATGGATTGGCAGCAGTCTTCGCTGCCTACTATGTCTTCAACTTGCAATATCCGGGAGAAGCCGCAAGCACACTTGAGTTCATCCAGAGAGCCTTTTGCGGCATAAATCCCCCGACGGGCAGTAAGGCAGAGAAAAAACGAGGGCTGAACGCACCAGATTGCACACTTTTGAGGAAACTGGCGGCTGGCAGCAGTGAAGGGGGAACCCTCCGGCGGCCGATGGCAAAGGCAGAACCCTTCTGGACCCCAGTGGCAAAGGCAGAACCCTTTTggaggccggcggcgaaggcAGAACCCTTCTGGAGGCCGGTGGTGAAGGCAGAACTCTTCCAGCGGCTGGTGGCGAAGgcggccggcggcgaaggcAGAACCCTTCTGGCGGCCGGCGGTGAAGGCAGAAACCTTCTGGCGGTCGGCGGCGAAGGCGAAACCCCTCAGGCGGCCGAACTGGACGTCGAGGGCACTCAGGCAGCCGGTCAAGACGTCAAGAGCTCTTGGGCGGCCGTCGGTGAAGGCGAATCCCTTCTGATGGCCAAACAGGACGGCGAGGGCAGCGCCCCCCCCAGAGGCCAAGGCGGAGCCCCTTTGGAGGCTGTGCAGGTGAAGGGGCTAGCCAGCCAGGGATCTGGGAGGCTGCTAGGCAGCAGGGGGTCAGGGAGACTGCTAGGCAGCCGGGATTCAAGGGAGCTGCAAGCCAGCCGGGGATCTGGTAGGCTGCTAGCCAGCCGGGGGTCAGGGAGACTGCTAGCAAGCCGGGATTCAAGGGAGCTGCTAGCCAGCCGGGGATCTGggacgtattag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781318.1 True 1992 mRNA 0.51 8 8723103 8740339

Neighbor

gene id symbol gene type direction distance location
LOC120546390 NA coding downstream 6669 8715565 ~ 8716434 (-)
LOC120546389 NA coding downstream 46418 8675816 ~ 8676685 (-)
LOC120546388 NA coding downstream 61791 8660443 ~ 8661312 (-)
LOC120546387 NA coding downstream 70976 8651258 ~ 8652127 (-)
LOC120546386 NA coding downstream 99375 8619759 ~ 8623728 (-)
LOC120546396 NA coding upstream 27660 8767999 ~ 8769024 (-)
LOC120546398 NA coding upstream 49493 8789832 ~ 8790701 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding upstream 177174 8917513 ~ 8931493 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 195585 8935924 ~ 8950403 (-)
LOC120546235 LOC107100257 coding upstream 221341 8961680 ~ 8991368 (-)
G183042 NA non-coding downstream 243757 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 291429 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 477338 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 531629 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 675165 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 30949 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 258236 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 358032 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 386382 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 393197 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 596439 8049458 ~ 8126664 (-)
G182977 NA other downstream 698059 8024715 ~ 8025044 (-)
G182952 NA other downstream 956717 7761565 ~ 7766386 (-)
G182764 NA other downstream 2021986 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2453960 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 40989 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 280621 9020960 ~ 9024565 (-)
G183176 NA other upstream 389234 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1359139 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1714905 10455244 ~ 10610625 (-)

Expression


Co-expression Network