LOC120546396


Basic Information

Item Value
gene id LOC120546396
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8767999 ~ 8769024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781320.1
ATGGATCCAGAAGTCACTTTCAACAGGACTAGCATTGTGACTGCCATACATCCCTGCTATGAAATAGATAACTTTAATTTCATACGGACAAAGACCCCTTCCATTAtatgtgtattattatattttttcctAATGTTATTGTCTGTTATCACAATATGTGGAAACCTTCTTGTTATAATCTCCGTATTGTATTTCCAACAGCTCCACACTCCTACTAACTACCTtattctctctctggctgtggCTGACCTGCTTGTTGGGATAATAGTCTTTCCTTTCAGCATGGCATTCTCACTAAGCTCATGTCTGTATCATGAGGGTTTATTTTGCAAAGTACGAGGCAGTTTTGATATAACACTGAGCACAACTTCTATTCTGCACCTAAGTTGTATTGCTATTGACAGATATTATGCAGTGTGTCAGCCTCTGACCTATAGAACTAAAATAAACCATTGTGTTGTTGTGAACATGATTGTGGTTTGCTGGGGGAGTTCCGCTCTAATTGCAATAAGCATCACAATTGCTGGATTAAACAATGATAAATGTGGGGAAAGGTGTTTGATTGATGTTCTCATAGCAAACAATATTGgatttattttctcattttacctCCCAGTGATCATAATGCTCTGTATCTACCTAAAGATTTTCCTTGCTGCACAGAAACAGGCACGCAGCATCCAGAACACAACCTGTCAGAGCAAAAAGTCTGGAGCAACTGTCAGTAAGAATGAGAGAAAGGCTACCAAAACTCTGGCTATCGTTTTAGGAGTCTTTCTTTTATGTTGGACTCCTTTATTTCTTTGTATCACTGTTTTGCCTTTCAGTAATGACTCAGTGCCAGTTCCTGTGATTGAAACACTTAACTGGTTTGCACTGTCAAACTCCATGCTCAATCCCTTTATTTATGCTTTCTTTTACAGCTGGTTCAGATCAGCTTTTAGAATGATCATTTCTGGGAAAATATTTAATGGTGATTATACTAATTCTAAACTTTCTTAACTTGAATAAATGACTGAACTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781320.1 True 1026 mRNA 0.38 1 8767999 8769024

Neighbor

gene id symbol gene type direction distance location
LOC120546393 NA coding downstream 27660 8723103 ~ 8740339 (-)
LOC120546390 NA coding downstream 51565 8715565 ~ 8716434 (-)
LOC120546389 NA coding downstream 91314 8675816 ~ 8676685 (-)
LOC120546388 NA coding downstream 106687 8660443 ~ 8661312 (-)
LOC120546387 NA coding downstream 115872 8651258 ~ 8652127 (-)
LOC120546398 NA coding upstream 20808 8789832 ~ 8790701 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding upstream 148489 8917513 ~ 8931493 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 166900 8935924 ~ 8950403 (-)
LOC120546235 LOC107100257 coding upstream 192656 8961680 ~ 8991368 (-)
LOC120546203 NA coding upstream 229868 8998892 ~ 9000320 (-)
G183042 NA non-coding downstream 288653 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 336325 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 522234 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 576525 8191178 ~ 8191474 (-)
G182983 NA non-coding downstream 720061 8047500 ~ 8047938 (-)
G183068 NA non-coding upstream 2264 8771288 ~ 8771585 (-)
G183136 NA non-coding upstream 229551 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 329347 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 357697 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 364512 9133536 ~ 9134536 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 641335 8049458 ~ 8126664 (-)
G182977 NA other downstream 742955 8024715 ~ 8025044 (-)
G182952 NA other downstream 1001613 7761565 ~ 7766386 (-)
G182764 NA other downstream 2066882 6700491 ~ 6701117 (-)
cgrrf1 NA other downstream 2498856 6232742 ~ 6269143 (-)
LOC120546397 NA other upstream 12304 8781328 ~ 8787218 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 251936 9020960 ~ 9024565 (-)
G183176 NA other upstream 360549 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1330454 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1686220 10455244 ~ 10610625 (-)

Expression


Co-expression Network