LOC120546398


Basic Information

Item Value
gene id LOC120546398
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 8789832 ~ 8790701 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781322.1
ATGTTGTTGTCTGTTATCACAATATGTGGAAACTTTCTTGTTATAATCTCCGTCTTTTATTTCCAACAGCTCCACACTCCTACTAACTACCTtattctctctctggctgtggCTGACCTGCTTGTTGGGATCATAGTCTTTCCTTTCAGCATGGCATTCTCAGTTAGCTCATGTCTGTATCATGAAGGTTTATTTTACAGATATTATGCAGTGTGTCAGCCTTTGACCTATAGAACTAAAATAAACCATTGCGTTGTTGTGATCATGATTCTCGTTAGCTGGGGGGTTTCTCTTCTAATTGGAATAAGCATCATAATTGCTGGATTAAACAATGATAAATGTGAGGAAAGGTGTTTGATTGATGTTCTCATGGCAAACACTATTGGACCTATTTTATCATTTTACCTCCCAGTGATTATAATGCTCTGTATCTACCTAAAGATTTTCCTTGCTGCACAGAAACAGGCACGCAGCATCCAGAACACAACCTGTCAGAGCAAAAAGTCTGGAGCAACTGTCAGTAAGAATGAGAGAAAGGCTACCAAAACTCTGGCTATCGTTTTAGGAGTCTTTCTTTTATGTTGGactcctttctttctttgtataaCTGTTTTGCCTTTCAGTAATGACTCAGTGCCAGTTCCTGTGATTGAAACACTTAACTGGCTTACATTGTCAAATTCCATGCTCAATCCCTTTATTTATGCTTTCTTTTACAGTTGGTTCAGATCAGCTTTTAGAATGATCATTTCTGGGAAAATATTTAATGGTGATTATTCTAATTCTAAACTGTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781322.1 True 798 mRNA 0.37 2 8789832 8790701

Neighbor

gene id symbol gene type direction distance location
LOC120546396 NA coding downstream 20808 8767999 ~ 8769024 (-)
LOC120546393 NA coding downstream 49493 8723103 ~ 8740339 (-)
LOC120546390 NA coding downstream 73398 8715565 ~ 8716434 (-)
LOC120546389 NA coding downstream 113147 8675816 ~ 8676685 (-)
LOC120546388 NA coding downstream 128520 8660443 ~ 8661312 (-)
LOC120547332 LOC103374244,LOC103457752,LOC100712349,LOC103148799 coding upstream 126812 8917513 ~ 8931493 (-)
mep1a.1 LOC103374245,LOC100712081,LOC105920587 coding upstream 145223 8935924 ~ 8950403 (-)
LOC120546235 LOC107100257 coding upstream 170979 8961680 ~ 8991368 (-)
LOC120546203 NA coding upstream 208191 8998892 ~ 9000320 (-)
brox brox,LOC102780098 coding upstream 212568 9003269 ~ 9020428 (-)
G183068 NA non-coding downstream 18247 8771288 ~ 8771585 (-)
G183042 NA non-coding downstream 310486 8478912 ~ 8479346 (-)
G183027 NA non-coding downstream 358158 8431362 ~ 8431674 (-)
G183013 NA non-coding downstream 544067 8245565 ~ 8245765 (-)
G183006 NA non-coding downstream 598358 8191178 ~ 8191474 (-)
G183136 NA non-coding upstream 207874 8998575 ~ 8998828 (-)
LOC120546288 NA non-coding upstream 307670 9098371 ~ 9099326 (-)
G183175 NA non-coding upstream 336020 9126721 ~ 9129230 (-)
G183177 NA non-coding upstream 342835 9133536 ~ 9134536 (-)
G183178 NA non-coding upstream 343844 9134545 ~ 9134808 (-)
LOC120546397 NA other downstream 2614 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 663168 8049458 ~ 8126664 (-)
G182977 NA other downstream 764788 8024715 ~ 8025044 (-)
G182952 NA other downstream 1023446 7761565 ~ 7766386 (-)
G182764 NA other downstream 2088715 6700491 ~ 6701117 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other upstream 230259 9020960 ~ 9024565 (-)
G183176 NA other upstream 338872 9129573 ~ 9133472 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 1308777 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 1664543 10455244 ~ 10610625 (-)
G183528 NA other upstream 1730016 10520717 ~ 10521410 (-)

Expression


Co-expression Network