LOC120546414


Basic Information

Item Value
gene id LOC120546414
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17671513 ~ 17686499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781339.1
GAGAGGGACAGAACAGGATCTGGTTGGATGATGTTCAGTGTACTGGTCATGAGCCTTCTGTCCTCAAGTGCCCACACAGACCAATGGGGGAACATAACTGTGGCCACAGTGAAGATGTGGGGGTTGTCTGTTCAGAATATGTGAGAGTGGTCAACGGAAGCAATCGATGCAGCGGTCGAGTGGAAGTCCACCATGATGGCAACTGGAAACGAGTGTGCAATGACTGGACCAAGGCAGACGCTGACGTGGTGTGCCGAGAGATTAACTGTGGCACTCCTGTCGATCAGGCTGAAGTGCTATATTTTGGAGAGACACATGACCTGGGTGGCGTCAAACCCAAGTGCTTTGGGAATGAGAGCTCTCTCTCACAGTGCAGACTTCAGGAATTCAAGGAAAGCTGTGTCGATGCTACTGTTGTCTGTACAAGCAAACTACTTCGGCTGAGTAACGGGACTAGTCGGTGCTCTGGCCGAGTGGAAGTCTACCACGATGGACAGTGGGGAACGGTTTGCGATGACAGATGGGGGATGCCGGAAGCAGATGTTGTATGTCGAGAGATGAACTGTGGGAGTGCTCTCTCGGTCCAGTACAAGGCGTTTTTCGGCAGAGGTCAGGATCGGGTTTGGTTGGACGATGTTGAGTGTACTGGTCATGAGAAGTCTCTTGCTGACTGCCCTCACAGAGGTTTTGGAGAAAACGACTGTGACCACAATGAAGATGCTGGTGTTATATGTTCAGATTCAGTCAGATTGTTCAATGGGACTGACCGCTGCTCTGGCAGAGTGGAGGTCTTCCACAATGGCCAGTGGGGGAAAATTTGTAATAACTGGGGCAATGAAGATGCTGAGGTGGTGTGTAAGGAACTCAATTGTGGCCCTCCAAAACCAACTCAAAGCTTAAATTTTGGTGAAAGTGGACTGAGAGCCTTTACAAGTAGATGCTCTGGCAATGTAACCTCTATCTCCCAATGCACACTTCAAGAATTGACCGGGAGATGTGAAGCTGTTTCTCTTTCATGTGGAGGTAATCCACCACTAAGGCTTGTCAATGGCACTGACAGATGTTCTGGTAGAGTGGAGGTTCAGCACGATGGCCAGTGGGGAACGGTGTGTGATGACGAGTGGGACATCAAAGATGCTGAGGTGGTGTGCAGAGCCATGGACTGTGGAACAGCTAAGACAGCCAAATCCAGTTCCTTCTTTGGTCAAGGCCAAGGAGCCATCTGGCTGGATGATGTAGGCTGTATCGGTAATGAGACGTCTCTTATGCACTGCCGACATTCCACCCTCGGAGAACATAACTGTGGTCATGGGGAAGATGCCGGTGTTGTGTGCTCAGCTAACATTAGACTGATGAATGGGACTGACCAGTGCTCAGGCAGGGTGGAGTTATACCATGGTGGCCAATGGTCAGCAGCATATAATCTTAACTGGGGAATGAATGAAGCTGCAGTGGTGTGCAGAGAGATGAATTGTGGAGATCCTGTTAAGTTCTCAGGATCATATGGTCAGGGCAGACATTCAAGAGGGTATACGATCAGTTGTAGCGGACCGCAAGATCGCTTTGAAGAGGCATCTGTCAAATGTTCAGGTAATGTGAAGTTGTCTGAGGGGCCCAGTCAATGTGCTGGAAGAGTGGAGTTCTACGACAATGGCCAGTGGGGGAATGTGTGTGGTGAATCCTGGGATGTGAATGATGCAAATGTGGTGTGCAGACAGCTGGACTGCGGGAGGGCTCATAAAATTACCACTGTGGCTGAGTATGGCCATGGTACGGGACACACCTGGATTGAACAAATTGAATGCAATGGAATGGAGTCAACACTGAGTCAGTGCTCACAGAGACCAtttagagacaaaaaatgcaactCAACCTCAGTTGCTGGTGTTCTCTGCACAGGAAGTTTGGAGGTCCGGTTGGTTAATGGTAAAGATGAATGCTCTGGCAGAGTAGAGGTCCGTCATGGCAATGTGTGGCAAACAGTTTGTGACACAGACTGGACCCGGAGTAAAGCTGAGGTGGTGTGTGAGCAGCTGGAATGTGGAAATGCATTGAGCGCTCCTGGCGCTGCCCATTTTGGCCAAGGCAGTGGATCAGTAGTGGAGGCTAGCAATTCATGTTTTGACAATGTGACATCTCTTCAGCAATGCTCACTCAAAGGTTTCAGAGGAGCAAGGTGTGGGCACGAACATGATGCTTCTGCTCTATGTGCAGCACAGATACGGGCAGTCGGCGGCTCAGGTCAATGCTCTGGTAGAGTGGAGATCTTCTATAAAGGCCAGTGGGGAACTGTGTGTGATGATGAGTGGGGAATGAGCAATGCTGATGTGGTATGTAGACAGCTTGGCTGTGGTCATGCCGTTTCTGCTCCTATGAGTGCCCACTTCGGTAGAGGCACTGGCCCAATATGGCTGGATAATGTGGATTGTAGAGGCGAAGAGTCTGCTCTCACACATTGTACGCATCCAGGTTTTGGAGTAAATAACTGCGGGCACGGTGAAGATGCTGGTGTTATCTGTTTAGGTAAGAGGCCTGGCTCATTTTTAATCTGTGAATGACCTTCCAACAGGTATTAGATGAAGCTGTGTTTGCTGTTATGAAAACACTTATCTGTTTCAGGTCGCTACAGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781339.1 True 2633 mRNA 0.50 11 17671513 17686499

Neighbor

gene id symbol gene type direction distance location
tcf21 tcf21,LOC102777283 coding upstream 17152 17652502 ~ 17654361 (+)
slc2a12 slc2a12 coding upstream 48401 17615329 ~ 17623112 (+)
sgk1 sgk1 coding upstream 75459 17560853 ~ 17596054 (+)
aldh8a1 aldh8a1 coding upstream 155930 17506954 ~ 17515583 (+)
hbs1l hbs1l coding upstream 166639 17480198 ~ 17504874 (+)
eya4 eya4 coding downstream 23300 17709799 ~ 17758414 (+)
lca5 LOC104965141 coding downstream 105354 17791853 ~ 17799948 (+)
fam167ab fam167a,LOC102799533 coding downstream 113591 17800090 ~ 17808692 (+)
mtmr9 mtmr9 coding downstream 202142 17888641 ~ 17904513 (+)
tdh LOC108242421,LOC106524872,LOC104962272,LOC104922441 coding downstream 220242 17906741 ~ 17913030 (+)
LOC120546942 NA non-coding upstream 36 17669166 ~ 17671477 (+)
G185134 NA non-coding upstream 3793 17633119 ~ 17667720 (+)
G185136 NA non-coding upstream 9700 17640961 ~ 17661813 (+)
LOC120546270 NA non-coding upstream 17152 17636952 ~ 17654361 (+)
G185112 NA non-coding upstream 117604 17553442 ~ 17553909 (+)
LOC120546941 NA non-coding downstream 197 17686696 ~ 17688280 (+)
G185155 rps12 non-coding downstream 74177 17760676 ~ 17763736 (+)
G185156 NA non-coding downstream 77470 17763969 ~ 17764792 (+)
G185254 NA non-coding downstream 370912 18057411 ~ 18059367 (+)
G185258 LOC104959833,LOC107082730,LOC103138645,LOC106923247,LOC106920026 non-coding downstream 416526 18103025 ~ 18104904 (+)
map7b map7,LOC107374525 other upstream 296454 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 375812 17293654 ~ 17295701 (+)
G184859 NA other upstream 838199 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 891578 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 985434 16671586 ~ 16686079 (+)
G185237 NA other downstream 230354 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 334457 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 440632 18127131 ~ 18140260 (+)
ylpm1 ylpm1 other downstream 911866 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 1019357 18705856 ~ 18711994 (+)

Expression


Co-expression Network