ttbk2b (LOC103372651,LOC104945868)


Basic Information

Item Value
gene id ttbk2b
gene name LOC103372651,LOC104945868
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 22848098 ~ 22856575 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781345.1
atgataGGATATAAGCTGCAGTGGTCTTTGCTTCAGTCACCACAAAACACAGTAGGCAAAGACCACGTGTGTCGCTTTGTGGGATGTGGCCGAAATGATCGTTTCAACTATGTGGTGATGGAACTCCAGGGGAGGAATCTGGCAGATTTGCGCAGAACCATGACCCGTGGCACCTTCTCCGTCTCCACAACTTTGAGACTTGGCAAGCAGATTTTAGAGGCCATTGAAAGCATCCACTCTGTAGGATTCCTGCACCGAGACATTAAACCTTCTAACTTTGCAATGGGAAGACTAGCCAGTACCTGCAGATGCTGCTATATGCTTGATTTTGGCTTGGCCCGTCAGTTTACCAACTCCAACCAGGAAGTCCGTCCGCCTCGTCCTGTGGCAGGCTTCAGAGGAACTGTGCGATATGCTTCAATCAATGCTCATAAGAATAAGGAAATGGGTCGTCATGACGACCTGTGGTCCCTCTTCTACATGCTGGTGGAATTCATGGTTGGTCAGCTTCCCTGGAGGAAAATCAAAGACAAGGAACAAGTAGGAAATCTAAAAGAGACATATGACCATCGACTCATGCTTAAGCACCTTCCCTCAGAGTTTAGTACTTTCCTGGATCACATCTTGACCTTGGACTACTTCACTAAGCCAGACTATCAGCTCTTGATGTCAGTGTTTGAGAACGCTATGAAGAGCCACAGCACGCTGGAGAATGACCCTTATGACTGGGAGAAATGTGACTCGGAGGATATGCTGACCAACACTGCCGCAACAACCACTGCTCAGCAGCTCACTCGCCTCACACCGGCGTACTTAGGCATGGCCAATGCTTCAGTGCTGCCAGGCGAGCTGCAGAGGGAGAACACTGAGGATGTCCTGCAAGGGGAGCGCCTCAGCGATGCTGACAACTGCCCCCCCATCCCCACACCGACCACCACCCCTGCTGTAGATGTATGGTCAGAGATGGACCGCAACCGAAACCATAAACATGTACAGCCGATGATCAGGAAGGTGGTGAGTGAGGATGAACACAGTCAGAACCAGGGGAACCAGAGCCCCAACACCGGCTCCATGCAGAGTTCTCCTAGACGGGTGCGATCAGAGACCATGTTCTTGGAGCGGGCTGCGCCACTGCTCCGGAGGATGAGACACAGTCAGAGCTTGGCGTTTGAAAAGAGGCTTGCACCCGAACCCAAGCCCACCATTGAACGCTTCCTTGAGGCCTACTTGGGCAAACAGCGCCCGGTCCTTTTTCAAGTTGGGGAGCAATCCATTCCTGAGAGGGAACATGGGCAGCATCCTGCCTACAATGAGGAACAGTCTGGCACAGCAACCCCTGACCACGAAGAGGGCGCAGCAAGCAGTGGCTTTGTGGCTGTGAACCTCAGTCCCGTGCCCCAAGAGGGAGACTCTCAGGAGTGGGTGATGCTGGAGCTAGAGCAAGGCAGCGGTTCTGGAGCTACCAAGCCTCAAGGTGAGGCCCTGCATGAGGACAAGCCTGAGACGCACACACCCGCTGAGACTGAGAACCAGTCCTCTGAGCCACAGGATGGCCAGCCCACAGTGGTGCCGAGCAGTCCTGTCCTGTCACAGATGTCCATGCCCGGCACTTGGTTACTGGGCCACAGGAGACTGCCGGGAATGCTGGGACAAATGCCCTCTGTCATTATGGGAAGACCCCAGATGGACCAGTCCTCTAGCTGTGCGCTACATTCCCCTGTACAGGAGAGGAGTGAAGCAATACCACTAGAAGCACCATCTGCTAAATCTGAAAAACTCCCTGAGGAAACCTTCAAAGATGGAGGGAGGTTGGAGTTAGCTCCAGTGCCAAGTTCAGCCAAAGGCCCCAATGCTCACCTGACAAACGACAGAGACCCTGAGAGTGATTCTGGTCTGCCGGATCGCTCCTCCGAACCGAATCAGCAGCCTCAAGCTGACGCAGCAGGAGGCGCTGTGGAGAGTACCGTCACCGTCTCGTCCTCTCCCCCGCCAGCGCTGCTCAGGAGAAGAGATTCTCCCTCGTCCCCGAGATTGAGTCGAATCCCAGTACGAGACCCCAGCAACCCCCTGGACTCTCCGAGCCGGGACTTCAACATGGAGAGGCGCCATCGCTGGAGCAGTCCAGTCCCCGGCTCCCCCACCCACTCaccctctccatctctgtcctgTGACAACCTTCCTTGCGCTTTGCCAAGAGACAGGCTCTTCTCAGAGCGAGGCTCCAGGTCCGATTGTGTAGGAGAagaccctctctctctgtcctcctcatCAGGTAGTAAAAGTAAGATTCCACGTCCTGTGAGCGCCGCCTTTATGCCTGAGCAACTCACCAGCAGGTTTCTGCCACGACCACCTCCTGGGAAACCACCCATCCGCCCGTGTGTGGACaacagACGACGGCGGTTAAGAGTGCGTGCCAGCAGCACTAGTGACGCAGATTTTCTAGCCAGTCTGACTCAGCTGATGCAAGACCGAAGCGGGATGCTCTTCAGCCCTCCTCCACGCCCTcgcagctcctcctcctcccttcagCGCTCGCTAAGCTCCTCCCCCTCACGCCAGGAGCTCCGGGAGGGCGGGGCACTGCAGGGACGCAGCCGCTCTCCATCTAGCTTCTCCAGCTCCCCTCCCCCTCGGCATCCTCACCCACATGACCGGTTCGGAGGGCAGGGTCAGTGGGGCCACAGCTCCAGGGGAAGGGGTCTCATCCACGAGAGTAAAGGCTCCGGCAAAGTGAGTCGATGACTGTATTTGACACACAAGTGACTGATCCGGATAGTGCAACTGTAGCGAGAGGCTGTTTCACATCCAGTCGTCGATAGCATGTGTAAATACGGTATTTACTCAAgggaatgtactgtatgtaatgtaaaatgtataaattgtatttatttatttattcatttgttgGATGTGTCTCTCAAAATACTTGACAATGTGGCTTGATACCTGCAGTTGAAACAAAAAGGTTGAGAAAACCTTAAGATTGCCAACTCTTACCTCTCATTTTAACTCTTCTCTTAACTCTCCATATTGGCCTAAGATGAGACCAAAAAGATAATGTTTAATAACCGAAGGATGTAAAAAAGATGCTAATTGTAGATATGTACCATGAGGACATAATAAACACTAATAGGAACCATGTAATCGCATTAAGAACACTAAAAGTAAATAACACCTCACGTAGTATACCAACATCGGCATTCATGTACAGAACCAGGGCATGCAGCCCCATGTTGACCTCACTCCTGTAAAACAGCTAGATTAATTATTGTATTTGACAATGAATTGTTCATTTGGCATATCACGGTGTAGTAGTGTGCTTTTACTTTGCTAGAAAATATTTGTCATGCAAAAGGCATCTGCATATTAGAATGTACATGTAAGTGCACTCATACCTAAGTATTGTAAAAGTGCATGAGTATCAttgcaaattattattttttttattaatttgtatAATCCGCTAAGACatctgtatttttgttgaaCTGCTTCTGATTAATATACATTATAATGTAGACCAGCAATGACGTGCAATTTTATTTCTTACATCAAGTAGATGATAAAGTAAAAAACTTATACAAATGGAAGCTGTTTATCATGTCTGattgttgcattttattttttatcacaatttaaaatacatattaAAATAAGTAAATTCAATAAATGCCAGATCTCAAAAATGTTACTTCCTGGCTACACCTGCTACAGTTTTTGTTGGGATTAAAGGGTCAGTTCGCCTAAATTTA

Function

NR:

description
PREDICTED: tau-tubulin kinase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781345.1 True 3755 mRNA 0.50 13 22848098 22856575

Neighbor

gene id symbol gene type direction distance location
zpax1 NA coding upstream 52735 22790720 ~ 22795363 (+)
ttc32 ttc32,LOC102775905 coding upstream 57543 22787092 ~ 22790555 (+)
matn3a matn3,LOC103362679,LOC101066369 coding upstream 66305 22775637 ~ 22781793 (+)
laptm4a laptm4a coding upstream 73466 22762357 ~ 22774632 (+)
LOC120546327 NA coding upstream 86540 22756018 ~ 22761558 (+)
znf106b NA coding downstream 4233 22860808 ~ 22875214 (+)
nrbp1 LOC100699297,LOC102778226,LOC102314540,LOC103372645 coding downstream 35597 22892172 ~ 22902489 (+)
rhag LOC100174886 coding downstream 88934 22945509 ~ 22959259 (+)
opn8c NA coding downstream 288333 23144908 ~ 23151382 (+)
tagapb NA coding downstream 303452 23160027 ~ 23186726 (+)
G186641 NA non-coding upstream 424 22846872 ~ 22847674 (+)
G186622 NA non-coding upstream 48040 22799735 ~ 22800058 (+)
G186578 rhob,LOC104947257 non-coding upstream 128205 22716970 ~ 22719893 (+)
G186506 NA non-coding upstream 310382 22535659 ~ 22537716 (+)
G186452 NA non-coding upstream 553401 22294442 ~ 22294697 (+)
G186697 NA non-coding downstream 160382 23016957 ~ 23018800 (+)
G186725 NA non-coding downstream 286855 23143430 ~ 23143648 (+)
G186726 NA non-coding downstream 287384 23143959 ~ 23144290 (+)
G186747 NA non-coding downstream 412223 23268798 ~ 23275460 (+)
G186842 NA non-coding downstream 564324 23420899 ~ 23432383 (+)
kcns3b kcns3,LOC103372653 other upstream 37578 22807879 ~ 22810520 (+)
lin28b lin28b other upstream 546513 22280967 ~ 22301585 (+)
G186394 mycn,LOC108233328 other upstream 782509 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 901098 21944743 ~ 21947000 (+)
gtf2h5 gtf2h5 other upstream 1675459 21170948 ~ 21172639 (+)
si:ch211-22i13.2 NA other downstream 105458 22962033 ~ 22966010 (+)
dtl dtl other downstream 231245 23087820 ~ 23095505 (+)
ppp2r5a ppp2r5a other downstream 239337 23095912 ~ 23142640 (+)
rsph3 rsph3 other downstream 336063 23192638 ~ 23196996 (+)
tcte1 NA other downstream 702923 23559498 ~ 23564429 (+)

Expression


Co-expression Network