LOC120546473



Basic Information


Item Value
gene id LOC120546473
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23246999 ~ 23253449 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039781401.1
AATATAAATGAGGCAAGATGTGAAATATGCTTCTAGAGGAAGGCATTTCTTCATGCTCGTCCGTGATTTGATTCCTCATTTTAAGCTCTCACTTTGACAGTTTGATAGGAGAATTTCACTTGAATAGAAGAGGACCATCATCACGTCAAGCTCTCCGAAGTGAACAGTGTGGTCCAAACTACCATGGCTACGTACACCTTCAGCGTCCTGTGCGCCTTGGGCGTTTTTGCTGCTCTTCAGGTTCCATGCACCTTGGCTCTGGCTTCAATGGATCATCCACAAAGTTGACTGCAGGCCAAACTGACCCGACTGAGATTGTGAACAAGCATAACGACCTGAGAAGAAATGTTCAGCCTTCTGCAAGCAACATGTTGGAAATAAGCTGGAGCAGTGAGGCTGCAGCCAACGCTCAGAGATGGGCCAACACCTGCTCGATGAAGCACAGCCCTGACAGCTCCAGAAAAATCAGCACTAGTGGCTGTGGAGAGAACCTGTacatgtccagctgggaggacaCGTGGAGCAATGCTATCCAGAGCTGGTACAACGAGATAAAGAACTGGCGCTACGGAGTGGGAGCTACCAATGGAGGAGTGGTCGGACACTTCACACAGCTTGTTTGGTACAGGTCCAACAAGGTTGGGTGTGGTATGGCCTACTGTTCCAACTCTAGTTACAAGTACTTCTACGTCTGCCAATACTGCCCACCTGGAAACTACCAGTACGCTCGCCCCTACACATCAGGACCCTCCTGCGGTGACTGCCCCAATGCTTGCAACAACAAATTGTGCACCAACGCCTGTCCCTACACTGATCAGTATAGTAACTGTGCTGATCTGAAGAAGCAGTGGGGCTGCACACAAAGCGAGGTGGCCTCTTGGTGTCCCGCCTCCTGCAAGTGCAGCTCTGAGATTATTTAAATGTCCACATGGGCtgtgaccatagactgtagaaAACAGGCTCTGACGCATCATACAGTTTCAATAAAAGATACTTATCTTTAAA

Function


GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG:

id description
K19919 CRISP1_2_3; cysteine-rich secretory protein 1/2/3

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039781401.1 True 1005 mRNA 0.49 8 23246999 23253449

Neighbor


gene id symbol gene type direction distance location
ezrb ezr,LOC103355633 coding upstream 9827 23198834 ~ 23237172 (+)
tagapb NA coding upstream 60273 23160027 ~ 23186726 (+)
opn8c NA coding upstream 95617 23144908 ~ 23151382 (+)
rhag LOC100174886 coding upstream 287740 22945509 ~ 22959259 (+)
nrbp1 LOC100699297,LOC102778226,LOC102314540,LOC103372645 coding upstream 344510 22892172 ~ 22902489 (+)
kcnk3a kcnk3,LOC102784354 coding downstream 54274 23307723 ~ 23348356 (+)
slc35f6 slc35f6 coding downstream 118435 23371884 ~ 23381214 (+)
hlx1 hlx,LOC102784911 coding downstream 137757 23391206 ~ 23395336 (+)
mia3 mia3 coding downstream 269438 23522887 ~ 23539844 (+)
rnf8 NA coding downstream 295129 23548578 ~ 23554266 (+)
G186726 NA non-coding upstream 102709 23143959 ~ 23144290 (+)
G186725 NA non-coding upstream 103351 23143430 ~ 23143648 (+)
G186697 NA non-coding upstream 228199 23016957 ~ 23018800 (+)
G186641 NA non-coding upstream 399325 22846872 ~ 22847674 (+)
G186622 NA non-coding upstream 446941 22799735 ~ 22800058 (+)
G186747 NA non-coding downstream 15349 23268798 ~ 23275460 (+)
G186842 NA non-coding downstream 167450 23420899 ~ 23432383 (+)
G186843 NA non-coding downstream 181687 23435136 ~ 23435351 (+)
G186841 NA non-coding downstream 184791 23438240 ~ 23439520 (+)
LOC120546283 NA non-coding downstream 222250 23475699 ~ 23506564 (+)
rsph3 rsph3 other upstream 50003 23192638 ~ 23196996 (+)
ppp2r5a ppp2r5a other upstream 104359 23095912 ~ 23142640 (+)
dtl dtl other upstream 151494 23087820 ~ 23095505 (+)
si:ch211-22i13.2 NA other upstream 280989 22962033 ~ 22966010 (+)
kcns3b kcns3,LOC103372653 other upstream 436479 22807879 ~ 22810520 (+)
tcte1 NA other downstream 306049 23559498 ~ 23564429 (+)
nfkbie nfkbie other downstream 324929 23578378 ~ 23589689 (+)
G186975 NA other downstream 826154 24079603 ~ 24083104 (+)
LOC120547070 NA other downstream 891548 24144997 ~ 24146762 (+)
extl3 extl3 other downstream 902038 24155487 ~ 24187864 (+)

Expression



Co-expression Network