LOC120546480


Basic Information

Item Value
gene id LOC120546480
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29315759 ~ 29371150 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781412.1
ATACGCATGATTGATTGATATATTTAGATCTAATAGGTTTTTTTAGCAGCATGAAACCACTGTCCATATACTGTAATCACGTTACTCCAGCAGCAACACTGACTGGTGGGATACAGTTACCTTGAATATCTATTCCCTCTTTCCCTTCCATCGTCCGTCAGTCCCCGCCGTTGATCTAATTCTGTCAGAGCCGGTAGAGGGAGGGGGCAGCCTGCTCTATCTACAACCATTGCTCCAAACCAGTGACCACCTTAActtggtctctgtctgtctcccctgCCTCATCCACTGGGACGGAAGTCAACTCTCTTTGGACCAGCCCGCAATTGGACccatgaaactttttttttcgacTTCTGGAACAAGAAAGGAAAATGCACATTAAAGTACTGAGAATGGAAAAAGAGGTGTAGAGTTtccagaggggggggggggtccggATTTTCCACATATCCTCAGCACCAGCCATACACGAGACGTTGCTAGGTTGGAATTAAACACTGGGATTAAATCGCGCAGAGGAGTTGAGGATCTACCAAGAGTATTTGTTTTCATGGCAACTTAATCTGCACAAAGGATTTACTGTTGGAATTTTACTTTGAAACTATGACTGAAACAGTTGAAGCGCGGTCGTCGACCACCACCATGGTCATCGACGGTAAGCATGTAGACGCCGGGTCGGCGTCTTCACGAGGACACAAGAAAACTTTTTCAGATGACCTCCACTCTACCTTCAGCTCCCCACTAGCCTGGATCTTGGTTCTGGCTCTCATCATTACATGGTCTTGTGTTTTTGTCATCATGTTTGATCTGATGGACTACAAGACCGTTTCAGGTCGCCCACCTCCTCTCGTCAGGAAGGTTTTAAAGGATTCAGGCCGTAGAGGAGGCCTCACCAAGATCGGCTCAGACCCCATGAAGGTGGTGAACGATGTCGTGGACGAATCGACAAACGTGATGAGTGCGATTTTAAGCTTTGTTGCCAACCTGGTTGCTCCTGAAGACGACGAAGTAACTCTATCTGCAGTGAGAAAAAAAGATTCAGGATggttggaggaggaggagaaagataaAGTGGAGGTGAagattaaaaaagcaaaagGAGAATTTCTACCCTCCCGAAGTAAAGTTATAGGGATGCAAGCAAAGGCGATACCACCAGTGATTGAAGTTGTggaggagggagaagaagaggtaggagaggaggagggagaagaagtgggagaggaggagggagatgaAGTGGAGGCTGctggtgaggaagaggaggatgaagaactagaggaggaagaggaagaggaagagtaTGAAGAGGAGTATGAAGAGGATTATGAAGAGGAGTACAATGAGGCATATGAAAAATAttatgaggaggaggaggaagctgAAGGAGAGGAGTTGGAAGGagtggaagaggaggaagaagaagaagaaggagaggaggagggagcagAAGCCGTGgatgaagaggagaaagaggaggaggatgaagaggagggggcagaAGCTgcggatgaggaggaggaggaggaggaagaagagggggaGGGGTCAGAAGCtgtggatgaggaggaggaggaagaagaagaggaggagggggcagAAGCtgtggatgaggaggaagaggaagaagaagaggaggagggggcagAAGCTgtggatgaggaggagaaggaggaagaagaagaggaggagggggcagaaactgaggaagaagaaaaggaggagggggcagaaactgtggcagcggaagaggaggaagaagaggagaaagaagaagagggggCAGAAACTGCAGATaaggaggtggaggaagaagaggaggaagaagagaaggggGCAGAAGCTGTGGCagcggaggaggagaagggagaggaagaagggcaaagagaggaagagcaagagggagagggacttgaagcagctgctgatgaagaggaggatgaggaggtgaaggTAGCTGCAGAGGTGGCACGagatgaggatgaagatgaagaagaggagaaggaacctgaaacagctgcagctgagaTTGATGAAGCTCATGAGGAAGACGAAGtgaaagaggaagcagcagcagaagatgatgatgatgaggaggaagaagaggaggcagATGCTGCTGATGAAGATGATGTAGAAGAGTCTGAGCCTGCAACCGCTGATGccgaggatgatgatgatgatgatgaggaggaagaagaagagaaggcaGATGCTGCTGATGAAGATGATGTAGAAGAGACTGAACCTGCAGCCGCGGATGccgaggatgatgatgatgaagagaaGGCAGACGCTGCTGACGAAGATGATGCAGTAGAGTCTGAGCCCGAGGATGAAGAGGCTGAGGATGATGAAGTTTCTCCTGAACCTATTTCCACTTCTGAGGATGAAGAGTCGGCGGTGTCTCCTGATTCTGAGTCTGACGCACCTGTTGACGTCCTAGACAGTGACGATGGAGACGACGAAGACGACGAAGACGACGAAGAAGACGACGAAAAAGACGACAGTAGCGACGCTGTCACTGACTCCTCAGAAGTCAGTGAATCTGCACTCCTTTccagcgaggaggaggaggaggaggaggaggagaaggacgATGACGACGATGAAGACGACAGATTAGCGGAAGGCGCCGAGACGTCCGACAGCGACGGCGTGCTTCCAGAAGACAGCGACGACGACCTGGAGCTtgaccttcctcctcttcctgctgCCAGCGAGGAcgacgaagaggaggaagatCACAAACTTGCTGAGGAGGAAGATCTTTCTGCTTTACCTTTCGTCGAGGATGACGACGATGAACACCTGGACGAAGACGTCAAAGTTGCCGAAGAGACTGAtgaggaggatgatgatgatgatgatggtctGGACCAATCAGACGAGGACATCTCCGTCGCCTCCTCTGATCACTTTGCAGACGATGAAGACGATAAAGACGATGAGGACGACGGTGACCTGAAAGACGAAGAACTCAAACTCGACCAAGACGTCCTCGCAGACCtcgacgatgatgatgatgatgatgatgatgatgacaaacCCGATGATGTCACTGAAGAAGACATCCATGACGACGACGAtaaagtggaggaggaggaagtcgACGCTTCTCCCTTTGAGAGTACGGACAGCGGCGTCTTAGGCGATGAAGATGATGACGACAGTGCTCTTGAAACTGATGAAGAGACGGTCTTCAGCAGTGACATCTCCTATGCCTCAAACGACGATGACGACGATGAAGATGATGGCGTTATTGACACCAGCTCGTTTGAGTTCATCTTCGatcaggaagaagaaaaagaaacagttGTTGACGCTGAAAAAGATGATGATGAAGTCACATCTGAGTCCTTACCTAGTGAGGATGAAGaagacgatgatgatgatgatgaagatgatgaagataaagaagaggatgatgatgatgttgacgACATCTTGCTAGCAGCTGCCACTGCAGCAGCGTTCTCCGTCCAGGAGGAGGCAGTAAAGGCTGAGGCAGACACCGACGAGGACGAGGACATCAAACAGGCTGCTGATGAAGATAAGACTGAAGAGGCTGAAGAAGCAGAAACAATTGTCACCAGTCAGCCTGCTGCTCttgaagaggaagaggatgatGAGGGGGAAGATGAAGCGCCGACAGCTGAACTGAAGAAAACTGTAGACGAGCCTGAAGATAAAAAAGAGGAGGAGTACGACGAAGACGACGACGAGAAGGCGACGGTGGATGTGATCAAGCCTGTGCCTGAACCCGCGGAAGAAGCACCAAAGGCTGAACCCACAGCGTGTCCCTGTATGCACTCTGCAAAGGCCACAGAGTCGGCCACCGAGACTGCAGAGAAAAAAGATGCTCCAAGAAGAGTTTCAGCTATAAGAAGGAAAAAAGagcGTGAAGGTGAAAAGACTGATGAAAAGCCAATGAAGAAAGGTCTGCCCAGAATTGTAAAACTGCAGCCACAAACCACGCGGATCAGGAAACTTCCTGCTCCTTTCAGAGCAAGGAGAGTGGAGAAGACTTCCACCAAGACTCCCAAAAAAGAGCCAGAGaccaaaaaagaagaagaggtcTCAGAATCTGAACAAGAAGTGGGTCCTTGCAGACCTGCACCAGTCTACTGCCCGTCCCCGCCTGGCTGGTACGTTCATCATGTCGTCACGGACAACCCGTACCCTCCTCCGACCATGTCAGctccctctgctcctgttctgaCCGCTCACCCCGTCAACCCCGGAGCTCCACCGCCTCTTTATCAGCAGCAGCCACCGCAGCCGATGCACCCGTTCTACGCACAGTATCACCCATATCACCCATATCACCCATATCCACCAATGCAGCCGGTGATGCAGCCTCAACCGGATCCAGTCCAGCCAGTTGACCCAACCCAGCCAGCTGAACCAGTCCAGCCAGCTGACCCAGTACAGCCAGCTGAACCAGTCCAGCCAGAAGCCACAGAACCAGAGGCTCCGGTTCAGCCTGAGATCCCGATTCCAGCTGCTGAAGCTCAGCCAGCTGTAGCTCCAGTCCAGGAACCAGAGACTGTTGAGGAGGAAGTGTTGGCTGCCTCCACTGAGAAAGCTGCAAAGAAGAAAAGCAAGGCTGCCGATACAGAAAAAGAGCCGGCAGCAGccagagagaaaacaaagaaagATGCTGCTGCTTCGAAAGAGAAAGCCAAAGCTGGCGCTGCAAAGAAAGAGCCAACCGTGAGAAAAGAGAAAACCAAAAGTCCTGCAGTGGAGAAGAAAGaGCCAGCTGTAAAAGAGAAAACCAAACCTGCTGCAGCTGCTAAGAAAGAGCCAGCTGTAACAGAGAAAACCAAACCTGCAGCAGCTGCTAAGAAAGagCCTGCAGCTACAGTCCGACAGAAGAGGAAATCAGCCTCTGAcaagacagAAGTGTCACCCGTTAGGAGCAAAGCCAAGGCTTCTACAGCCAAGAAAGATTCGGATCCAGAAGCCCGTCCACAGCCGATCAGACTGAGAACGAGACTAGAAGCTGTGAAGAGGGAGAACGTGACCTCTCACGCAAAGGAGGAGAAGCCTGCCAGGTCTTCCTCTGAACCAGccaaaACACGGTCAAAATCGTTGCCCGACAAGAAAAGCAAAGACGAGAAGGCTGAAACGAAATCTGTCAAAGAGGCTCAAGATAAAGAGAAACAACCATCACAAGCTAAAGAGACCCAGACTGATGACAATAcgacagaaaagaagaaaacagGCCAGAGATACTTCCAGTGCATTTACATCCCTGGTAAAAATGCACAGTACCCCTTGCGACCAGCCATGTCCCCCGCCATGATGTCTCCCGCTATCAAATCCATGTTGGagctgcagcagagagcagcgAGGGCGTCGGGCCAATAGGACAACCTGATCCCTCACCTCTTTCTTCTGACAGCACTGCATCTCCCAGTCCAGCAAGGGGAGACGCTCTGAATCTGTGGGATCCTTAAATCCTGAGGAAataccacagacagacagataagagTGGACAGAACTATTTTGTCtttaatttattcatgtatttatttttgtctcgATGTGGTCGAGCTCCTGGGGTTCCTGTTGATATTTCATACTTTTTTCGCTTAGCTGATGCTTCACCAGTCGACGCTGCCGTGCCTCGCTTGTGCCTTAGCTTTAACGTAATGATACCCAATATCCAAACACGGAAGCTTTTATGTGAATATTCTTAACTCAGTATGTGTAAATAATGcttatttttgtaatttaggCTGAAATAAATGTGCACACCTTTGGCATGTTGTTTTTGCAGTTTACTCTAGCAGTCCATTttaatttaaactttttatGGTACCCCACATTTAAACTTTAAGGCACTTGTGCTGACAAAACAGTTATGCACAGTGagaaacactgtttttttttagtttcaaAAGGTActtaatactaaataaaaaactgaTAATGCACAAACAAACCAAATAATAAGTAGAAACTGGTACAGTATTTTGCGTCAACTATTAAATAGGAATATATATCAGAATATCATTAAGAAATGAGTAAAActaaatagctttttttttattgaatttgaatGGGATTAAATATTACTTGAGTCAAGCTTTGTTTCAATACGAGAGCTATAATCAACAGTTTGTGTccccttttatttttaatagtaATTTTAAATCACCTGTATCCTGCCTACCGTAACAAGAACGGGTGTGTTTCGCTGCTTTGCTGCATCTGCAACAGATTAGTGTGCTAATGTTTGAAAGGTTAAATCCCGGGAGCTCCCATGTTTGATCCAAGCAGACTCCCTGTCTCTGATCCGGAGTCTCGTCGACATGTTAAATGTCGATGAGTGATGAACAATGATGAGGCATTTTCTTCTTAGATGACCTGATATCAGGCAGGAGTTAAGAGGAAGGTGAGCTCATCTCAGCCCGTGTAACTTTTGGACATGTTACAATGTGTATAACTGCATTTTAATGAAAGACACAACGCTTTAAGTTTAAAGAGATACTTTGACATCTTAAATGCAATTGTTGGATGTTTTTCATTCCCCACACACTGACGTGCTCATACGTTGGAGTAGTCTTGGTCGTGAAAATAAGGGCATAAAGTAAAAATTTACAGTATTTGGACCCCTCATCAAATACTAACAATAGTTTAATACTTGAACCCTGTTATTTCTCTTTTGTAAATAATTGGCCTCTCTGTTTCCCATGTAAATCTCCCAAACCTCGAAAGTAATCTTTGTTCTTATAAATGAGGTGATCACATAGGATCCCAAACGGTTTAAAGTTGAGCTGTCGCAGTTCGACACAGAACATACCAGTTATTTTAGCTTTGTTTAGAGACGGGGAGTCTGCACAGGACAACTCTGATGTGACCAACTAATGAGACGATGTGATGTCTGCTACAGTGGATACATGCCATGTTAATCATCAGCTGATTTAACAAAAAGCCTGATGCACATTGTCATATTTTCAGTTACCTCACTCGCTCTGGTTTTGTACCTTATACCGACAAGGCTGACTTGTTGTCGCTGCAAAACTGTCGCTGAGCATTATCGGCAATTTGCTGTTGTCTTACTGAATGAAAACCTTGACTACAGAgaaccaaaaacattttaatcctGGGATAAGACCCACTTTAGCCTGCTGTAGTGTTGGCCCAAGGCTACCAGTTTATTCAAATTTACAGTTCCTAAGCTGTCATTTGAATTCCTCAATGTTGTGCAGTGTAAGGCACTCACAGTGGTTACCTGCAGTTGAACACCTTGTGGACTGACTCAGAGCAGTTCTTGAACTGTACACTGATGTTAGAGGTGTGGCAATAATGTTTATCCCACGACTTACTAATCCTCATTGTATTGCATGTGTATCCTCAACTTTTTCTGGGTTATCCCCCAAAAAGTCTTAAGGTGTGTTCAGACTGAACCCAAAGCTAATTTCAGAGGCCATGCAAATGCATCCAAAGTCAAAGGAAAGATGTGAGTTGATACAAGCAGTTGCAGATTAAAAACTAGGTCGTGCAAACATCTAAAAATGCTTCCATTCAAGCAAAATAAATTGCATCCATCCTGCAGCTGTATGACTCCACTGCAGACACAAGACGAAAACAATGTAAACTGGGAACTAACCTTAACAGAGAACTGGAGTTCCTGTTATGGTTATGTTGCTACCAAGCTAGCAGCAACAGCTAGCCTCTGTGGAGTTTGTCAAACGGATATTTGTGGCAACTAATTGCACAGTAAAGCGAGAAGATATCGCTTTGAGTTCACTCCGAAAGCACCTTTAAAATCACTGGTGTGAATCCGAGCCAGAGCCAAAGCAGTCTCAGCTAGCTGTTTGCTGTTAGCATACTGATTTTTGAGCGTGAATATGTTTAACCTGAGGCTCGGAGTAAACTCGGGGTTAATGAGTCCAAGTGTGAAATGAGGTCAAGCTATCCCTGGGCCGCTCTCTGTCGCCCTGCAGGGTTTAGGTCAACAGGCCGGAAAAAAATGGAAGTGGGAAGAGGCCTCATGTTTCAGGGGCCAAAATGAGATCCGATAACCATTTCCAGAAGCAACCTGCCGAGTGGATGTGGTTGTTGGAGCGGCATTTTAAATTCACCTGGCGTTCGGGTGTTTTTcaggacttaaaaaaaaaaaagaatcctatTCCAGTGGGGCGATGCAGCAGTAGGTGTCTGCTCTGCTGTCTGGAGGCCCTGAGACGCAggcatgtgcacacacagacatcaaaggggaggcttttttttttttttattattaatatatatattcctgTTTGCAcacagctttcctatcaaacaaatgtatttattgaattaaaaaaatcttaatatcCGGTCGGGAGTTTAGactttgttgaaataaattggaAAGGAAGTCAGAGTTGTGTACATTTAacgttttgtttaaaaaaaaaaaaaagaaggaaaaagtttttttaaataaataattataagaAGTGCCCTTTTTCACTTGAGCCCCTGCCCcccaaaatgtctgtgcacgtccctgcTGAGACGTCAGCTGTAGACGATATGAACAGACACTAATTACACCAAACAGCTGCAACTGTGTGCTGCGAATATGTTTTTAGATCTAATCTAATCTGACGAGACGGTATACAATACATTTTGTAGGACTCATAATATCCATGTTTGATTACATGTTCTTAATATAGGCACATATGTCTGTGTGAGGCAGTGAAACAAGTCATTTATTCCCCTGCCTGGCAGTTTCTAAAGGAAACAGTGTCTACACTtgaagcaacaaaaaaatgtacttATCAGTATGTTTCTCTGCAGTTTTTCAGTAGTTTAAGTTCCGCTTACCGGTTAAACAGAGACCATGTTATATTTGTCGATCTGTACCTTCTCTGTGTTTATAATAAGACATATTTTATTACAATTACAACCCAGTCTAATGCTCTTTAAGTCAACACAGACTGCTTTCCATTCAACCAACCTGACTATCCGGCCGTTAAAggattcctgtttttttttttttaccactagTGGTGCTGTAGAGGAATGTTTCCAGGAGCAGGacatacaacacaaatacacttTAAATCCTTTTTCTAGCTGTAAAGTTAACTTTTTCGGACATGCAAAACAGAACTCTTCAGGAGCTAGCTAGGCTTACCTGTCacatcactgaaaaaaaaaaaaaattgaaatgctGCAATGTCTC

Function

GO: NA

KEGG:

id description
K23449 TRDN; triadin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781412.1 True 9193 mRNA 0.46 35 29315759 29371150

Neighbor

gene id symbol gene type direction distance location
slc30a2 slc30a3,LOC102796772 coding upstream 95032 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 390996 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 409379 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 443156 28866213 ~ 28872603 (+)
plg plg coding upstream 528941 28773325 ~ 28786818 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 490224 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 505771 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 524275 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 641005 30012155 ~ 30022642 (+)
LOC120546869 NA coding downstream 657800 30028950 ~ 30083063 (+)
G188172 NA non-coding upstream 153866 29157305 ~ 29161893 (+)
G188168 NA non-coding upstream 172212 29138073 ~ 29143547 (+)
G188122 NA non-coding upstream 270213 29044283 ~ 29045546 (+)
G188104 NA non-coding upstream 331879 28983644 ~ 28983880 (+)
G188101 NA non-coding upstream 334135 28978955 ~ 28981624 (+)
G188206 clvs2,LOC101073081 non-coding downstream 13060 29384210 ~ 29384442 (+)
G188208 NA non-coding downstream 56275 29427425 ~ 29428647 (+)
G188177 smpdl3a non-coding downstream 72197 29443347 ~ 29447023 (+)
G188281 NA non-coding downstream 167025 29538175 ~ 29538452 (+)
G188288 NA non-coding downstream 205074 29576224 ~ 29578102 (+)
si:ch211-245h14.1 NA other upstream 3395 29292705 ~ 29312364 (+)
G188167 ucn other upstream 178842 29134171 ~ 29136917 (+)
trim54 trim54,LOC103375614 other upstream 183059 29110958 ~ 29132700 (+)
G188063 NA other upstream 424395 28886490 ~ 28891364 (+)
ttll2 ttll2 other upstream 432638 28872686 ~ 28883121 (+)
G188207 clvs2,LOC107675107 other downstream 48226 29419376 ~ 29420727 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other downstream 90699 29461849 ~ 29463874 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other downstream 274104 29645254 ~ 29645823 (+)
btbd9 btbd9 other downstream 713398 30084548 ~ 30097239 (+)
angel2 NA other downstream 953822 30324972 ~ 30336202 (+)

Expression


Co-expression Network