c18h1orf131


Basic Information

Item Value
gene id c18h1orf131
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 27473216 ~ 27478075 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781427.1
GTCGGAACCAACCTGGTTGTCCCACGTGCTTTTACAGTTTGTTGTCATCCGGGCTGTTGTCGTTGAGTCCCGATAAGTTAGCAACTGTTTTGCTTTTATTCTGCTTGTACAGTTAGCTTAAAAATGAACGGAAAAGAAGACGAAGATTGTCTGTTTCTTGAGCACGTTTTGGATAAACTTTATGAGTTTGATGATGGACCAGCATCAAAAAAGAAGCTCAAGtctcagaagaagaaaaaacgaaAAAgacctgaggaggaggaggaggaagaagaagagcagtTCTCTACAGTCAAAGATATCTGCAGTGATGCTGAAGACAGCAGAGCAGATTATGCTGGCACTGAACATCAGCCGCAACAACCAAAGACTGGGGAAACAGGTCCAACCATCCGGCAGGCGAGCAAGGTGGAGGTCGTGACATTTCAGGACCCGAGAAAGAAACCGAAAACCAAGCAGATGCCAGCCCCTGACAAAATGCCTGCCCTTCAGAAGACAACAGAGACAAAGGAAAGCGACCCACTAGAAGAACTCAATTTGGAAAAGGCTCGTCTTGAGGTCCATCGGTTTGGGATCACAGGCTATAGGAAGGAGCAGCAGCGTGTTTTTGAACAGGACAGAGCTGTCATGCTAGGAGCCAGACCTCCTAAGAAGGACTACGTCAACTACAAGATGCTGCAGCAGCAGATCAAagagaagaagcagaaagcAAAGGAGGAGGTTCAGCCGgacctgaagaaaaaaaagaagcagagtaATCAAAGggacaagaagagaaaggtgtcctctggctctggctctggctctggctcgGCCCTCTCGGGTCAGGTGGGCCGCTTCAAGAACGGCATGCTGATCCTCAGCTCCAAGGAGATCCAGAAAATCAAAGGCAACAAGAGGCGCAAATAGgtgAGCGATTAAATCCCCCAGGATGGGAAAACCCACGCGGACCAGAGGAAGAACTGGCATCCAAAACACTGTCCGTGGCTCAGCTTACTGCAGGTCTGTTTGCAGTGGAAGTAGATGAGAGCCGAAATACAACGTGAGCTGTAAGGCTGATTTCCAAAGGAATTGTCTGCAGTTAAATATAAGACGGTGTTAATGGAGACTGAAGGCTGAGTTAGGAATCCAATTTACCGATGGACCCTGAATATACACAGTGGCAGGACGTTAATGCACAAAACTGGAGACTGTAAAATCATATTCCATCAcagttaatttatttttgtttttataaatgaccggaaaaaaaagaca
>XM_039781428.1
GTCGGAACCAACCTGGTTGTCCCACGTGCTTTTACAGTTTGTTGTCATCCGGGCTGTTGTCGTTGAGTCCCGATAAGTTAGCAACTGTTTTGCTTTTATTCTGCTTGTACAGTTAGCTTAAAAATGAACGGAAAAGAAGACGAAGATTGTCTGTTTCTTGAGCACGTTTTGGATAAACTTTATGAGTTTGATGATGGACCAGCATCAAAAAAGAAGCTCAAGtctcagaagaagaaaaaacgaaAAAgacctgaggaggaggaggaggaagaagaagagcagtTCTCTACAGTCAAAGATATCTGCAGTGATGCTGAAGACAGCAGAGCAGATTATGCTGGCACTGAACATCAGCCGCAACAACCAAAGACTGGGGAAACAGGTCCAACCATCCGGCAGGCGAGCAAGGTGGAGGTCGTGACATTTCAGGACCCGAGAAAGAAACCGAAAACCAAGCAGATGCCAGCCCCTGACAAAATGCCTAAGACAACAGAGACAAAGGAAAGCGACCCACTAGAAGAACTCAATTTGGAAAAGGCTCGTCTTGAGGTCCATCGGTTTGGGATCACAGGCTATAGGAAGGAGCAGCAGCGTGTTTTTGAACAGGACAGAGCTGTCATGCTAGGAGCCAGACCTCCTAAGAAGGACTACGTCAACTACAAGATGCTGCAGCAGCAGATCAAagagaagaagcagaaagcAAAGGAGGAGGTTCAGCCGgacctgaagaaaaaaaagaagcagagtaATCAAAGggacaagaagagaaaggtgtcctctggctctggctctggctctggctcgGCCCTCTCGGGTCAGGTGGGCCGCTTCAAGAACGGCATGCTGATCCTCAGCTCCAAGGAGATCCAGAAAATCAAAGGCAACAAGAGGCGCAAATAGgtgAGCGATTAAATCCCCCAGGATGGGAAAACCCACGCGGACCAGAGGAAGAACTGGCATCCAAAACACTGTCCGTGGCTCAGCTTACTGCAGGTCTGTTTGCAGTGGAAGTAGATGAGAGCCGAAATACAACGTGAGCTGTAAGGCTGATTTCCAAAGGAATTGTCTGCAGTTAAATATAAGACGGTGTTAATGGAGACTGAAGGCTGAGTTAGGAATCCAATTTACCGATGGACCCTGAATATACACAGTGGCAGGACGTTAATGCACAAAACTGGAGACTGTAAAATCATATTCCATCAcagttaatttatttttgtttttataaatgaccggaaaaaaaagaca

Function

GO:

id name namespace
GO:0044424 obsolete intracellular part cellular_component
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03020 RNA polymerase
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport
ko04120 Ubiquitin mediated proteolysis
ko03018 RNA degradation
ko03030 DNA replication
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781427.1 True 1257 mRNA 0.47 9 27473216 27478075
XM_039781428.1 False 1248 mRNA 0.46 9 27473216 27478075

Neighbor

gene id symbol gene type direction distance location
LOC120547023 LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760 coding upstream 65857 27072970 ~ 27407359 (+)
trnat-cgu_2 NA coding upstream 491423 26981721 ~ 26981793 (+)
esco2 NA coding upstream 567973 26896380 ~ 26905243 (+)
tmem214 tmem214 coding upstream 594638 26860070 ~ 26878578 (+)
LOC120546589 mapre3 coding upstream 616323 26843772 ~ 26856893 (+)
LOC120547108 NA coding downstream 71359 27549434 ~ 27553027 (+)
sprtn NA coding downstream 75036 27553111 ~ 27558019 (+)
fam89a fam89a,LOC104954304 coding downstream 86901 27564976 ~ 27569270 (+)
ttc13 ttc13 coding downstream 114435 27592510 ~ 27617141 (+)
selenol NA coding downstream 142056 27620131 ~ 27626987 (+)
G187738 NA non-coding upstream 76239 27396693 ~ 27396977 (+)
G187737 NA non-coding upstream 119568 27353404 ~ 27353648 (+)
G187729 NA non-coding upstream 223704 27249287 ~ 27249512 (+)
G187720 NA non-coding upstream 273892 27198990 ~ 27199324 (+)
G187693 NA non-coding upstream 550978 26921883 ~ 26922238 (+)
G187770 NA non-coding downstream 9089 27487164 ~ 27487422 (+)
G187772 NA non-coding downstream 26531 27504606 ~ 27504987 (+)
G187773 NA non-coding downstream 28231 27506306 ~ 27506587 (+)
G187774 trim67,LOC102787511 non-coding downstream 50999 27529074 ~ 27529765 (+)
G187779 NA non-coding downstream 54102 27532177 ~ 27575713 (+)
LOC120546215 LOC104930085 other upstream 434988 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 735413 26695430 ~ 26737803 (+)
G187574 NA other upstream 787709 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1020851 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1041819 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 1061325 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1394611 28872686 ~ 28883121 (+)
G188063 NA other downstream 1408415 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 1632883 29110958 ~ 29132700 (+)
G188167 ucn other downstream 1656096 29134171 ~ 29136917 (+)

Expression


Co-expression Network