nme6 (nme6)


Basic Information

Item Value
gene id nme6
gene name nme6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18194483 ~ 18198503 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781474.1
ATGTGTGCTGGTTTAGTTTCTGGGGACAGTATTAACGAGCGGACTGACTGGTGCGAGGAGTCGTATAACGTTAGCGAATATTCGCATATTAACGTTAAAAACACGTTAATATTAGAACAATGCTGTTAACAGCTCGCCGCCTGTCCAAAGTGCTGCAGCTCACCCTGGCGGTCATGAAGCCAGATGCTGTAGCTCATCCTGTGATGTTAGAGGCTCTCCACCAGAGAATCCTTGACAACAACTTTGTGATTGTTAGATGCAAAGATCTTGTGTGGAAGAGACAGGACTCTGAGAGGTTTTACGCTGAACATTCAGGGCGATTCTTCTACCAAAGACTTGTTGAATTCATGTCAAGTGGTCCGATGCGAGCATATATTTTAGCCAGAGAGGACGCCATTCGTCACTGGAGAGAACTTATGGGACCAACCAAAGTGTTCAGAGCCAGATACACCTCGCCTGCTACGATCAGGGCCCAGTTTGGACTCACAGACACACGAAACACAACTCACGGATCAGATTCTGTTGAGTCGGCACAAAGAGAAATCCATTTCTTCTTCCCAGACTTCTGTGTGGAGGAGTGGGTGGAGAAAGAAGAGCCATCGTTCAGATCAGGACAAATACATTACGACCACCAAAAACAGATCCACACACTTTCAACGCAAAGCTGACCCCAGAACTGCTGTTACAGTCACTGATCCCCTAAGGACCACTTAGAAACCCTGCAATTTTTCATCAATTGCTCATACAAAAAAATGCAAGCTGCCAGAGAAGATGCTACAATCCTACCTGCtatatttaatgtatactctgtgACGATCCCAGAAAAGTGCATGTGTTTGTCACCAAAGTTCCTCATAGTGCCAATATGTTtatcccatgtttttgtcagtAAAACTGATTTTCCTTGAACATGGAAAGATATACAGTTTACAAAGCCATTAAAAGAAGCAccataca

Function

symbol description
nme6 Predicted to enable nucleoside diphosphate kinase activity. Predicted to be involved in negative regulation of cell growth and negative regulation of mitotic nuclear division. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including eye; female organism; gill; gonad; and male organism. Orthologous to human NME6 (NME/NM23 nucleoside diphosphate kinase 6).

NR:

description
nucleoside diphosphate kinase 6-like

GO:

id name namespace
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG:

id description
K00940 ndk, NME; nucleoside-diphosphate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781474.1 True 957 mRNA 0.44 6 18194483 18198503

Neighbor

gene id symbol gene type direction distance location
atraid atraid coding upstream 17379 18173169 ~ 18177104 (+)
blk blk,LOC102291483,LOC102797075 coding upstream 182532 18002070 ~ 18011951 (+)
LOC120546768 NA coding upstream 200485 17976113 ~ 17993998 (+)
sox7 sox7 coding upstream 238885 17952559 ~ 17955598 (+)
pinx1 LOC102299901 coding upstream 245038 17919578 ~ 17949445 (+)
si:ch211-142k18.1 LOC104964445 coding downstream 75326 18273829 ~ 18282702 (+)
chrna2b LOC104964447,LOC101470861 coding downstream 85397 18283900 ~ 18293835 (+)
LOC120547097 LOC104922430,LOC103363566,LOC104964450 coding downstream 148733 18347236 ~ 18358913 (+)
zc3h14 zc3h14 coding downstream 203569 18402072 ~ 18409077 (+)
batf batf coding downstream 215509 18414012 ~ 18419160 (+)
G185323 NA non-coding upstream 12500 18181132 ~ 18181983 (+)
LOC120546825 NA non-coding upstream 29829 18155970 ~ 18164654 (+)
G185258 LOC104959833,LOC107082730,LOC103138645,LOC106923247,LOC106920026 non-coding upstream 89579 18103025 ~ 18104904 (+)
G185254 NA non-coding upstream 135116 18057411 ~ 18059367 (+)
G185156 NA non-coding upstream 429691 17763969 ~ 17764792 (+)
G185353 NA non-coding downstream 99360 18297863 ~ 18298151 (+)
G185354 NA non-coding downstream 100810 18299313 ~ 18300098 (+)
G185356 NA non-coding downstream 103677 18302180 ~ 18302519 (+)
G185357 NA non-coding downstream 104195 18302698 ~ 18302965 (+)
G185359 NA non-coding downstream 106751 18305254 ~ 18305577 (+)
znf513a znf513,LOC102795572 other upstream 54223 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 139557 18020956 ~ 18054926 (+)
G185237 NA other upstream 277235 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 500849 17674393 ~ 17693634 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other upstream 508085 17669172 ~ 17686398 (+)
ylpm1 ylpm1 other downstream 399862 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 507353 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 1005651 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 1156113 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 1169217 19367720 ~ 19389223 (+)

Expression


Co-expression Network