slc35b2 (slc35b2)


Basic Information

Item Value
gene id slc35b2
gene name slc35b2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23589968 ~ 23597399 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781485.1
TGTTGGTTTTGAGCAAAGAGGTGGGGGCCTTTCCTACTCAAGTGAACACATCGGCCATTGAAGATAAGTAGAAGACATCAGAGCTGAAGGCGACTAGTCCAAAAGAAGACAATTAACATAATCATTAAAATACCGTTACCTGCCAGATCCGCGCGGCTTGATGCTCTGTTGCATCGGAGACGTTTGAGTCTGTCGGCGTATGTGCTGCGCCAGGTGTCGGGCCACAGAGTGTGGGAAAATGCCATCTTTTTCATGGAGGGTTTGGCCTGCATTTGTGTTGCTTCTcttcacttccactgtggctGCTGACGAGTCATTACTACTGGAAGGCTGGCATGATGTCTGGCCCTTGCGCTTCCTCGTCAACATGCTGGGATACTTCACTATCATCATCCCTGGCTACTTCCTCATTAGCTACTTCAAGCGCACCAATTACTTAGAAACAGgtAGTGGGTTTTGCTTCCCTATCATAAAGACCTGCGTGTTTGGTAGTGAGGCCAAAACGGGTCTGTTGGATGACGTGTCGGTTGCACCCAGGAAAGAGGGTGATTCGGGCTCGTCAGTCAGACAGGTCGTCAAATTAATCTTTTGTGCTGTTGGACTTCAGGTATCGTACCTGACATGGGGAGTCCTGCAGGAGAGGGTGATGACACGTTCGTACGGAGCCACGACTCCAGAAGAGGAGGGTGAGAAATTCAAGGACTCTCAGTTCTTGGTCTTCATGAACCGTATCCTGGCTCTGACGGTGTCGGGCCTTTGGTGCATCCTGTTCAAGCAGCCTCGTCATGGAGCACCCATGTTTAAGTACTCCTTCGCCTCGCTCTCCAACATCATGAGCAGCTGGTGCCAGTACGAGGCCCTCAAGTACATCAGCTTCCCTACTCAAGTCCTGGCCAAGGCCTCCAAGGTAATCCCTGTCATGCTCATGGGTAAGATCGTCTCCCACAAGAGCTACGAATACTGGGAGTACTTTACCGCTGTGCTGATCTCAGTGGGTGTCAGCATGTTTCTGCTGTCCAGCACGCCCAGCAAGCACCCGTCCACCGTCACCACCTTCAGCGGGGTCATCATCCTCGTCGGCTACATCGCCTTCGACAGCTTCACCTCTAACTGGCAGGACAACCTGTTCAAGTACAAGATGTCGTCGGTGCAGATGATGTTCGGGGTAAACCTGTTCTCCTGCCTCTTCACTGTTGGCTCACTGCTGGAGCAGGGGGCCTTCTTCGACTCGCTGGCCTTCATGACGCGCCACTCCGAATTCGCCTTACACTCCCTTTTGCTGTCCGTGTGCTCTGCATGCGGCCAGCTCTTCATCTTCTACACCATCAACCAGTTTGGTGCTGCGGTCTTCACCATCATTATGACCCTGCGACAGGCCTTCGCCAttctcctctcttgtttcctctacGGTCACGCCGTCACCTTAGTGGGTGGATTTGGTGTTGGGGTAGTTTTCTTGGCACTTTTCTTACGGGTGTATGCACGTAGCCGCATGAAGACTGGCCGGCGGTCAGCGCAGCCGCTCCCACAGAAGGTGTAGCACTCCGAAGTCACGCTAAACTGGGAACTGAGACCACGTTTTCTGTGGTGCttttttgtctatttgtgtgtatcttatagttgttgttttttgggttttttttactgttcttttccgttggtttttgtttttcttcttctgcaatGGTACAGAAAGGGATTTTGCAGTTTTGACTCTTACACCAAGATGCCCCCAGGGGGTCCATGTGATTTGTCAGGTCAGCAGTCACAGAAGTTTTTGAGTGCCTGTAAGATTGTCTTATACACGAGTCCCAAACCCTAAACTTTGCAAACTGCCTCTTTACCTCTTTCGCAATTAAACCGTAGAATATTTTTCCTAAACCACCGTACGTGGCTTGTGCAGCCAATTACAGGTTACTGTGACCCTGAAAAATGTATGTGAGCTGTATGGCTAAGCATTCATTTTAAAGCGTTAATGACATTGCCCCTTACTTAACTTTATCCCTACACTTTGCTTATCTCACAGTCCTCTATGTTAGAGAGCAGGGGCCCTTATGTGTCGTGGGATTTTATCTTGTAAAGCTGTCAACATAGCCTGCACACAATACTGTTTAATTCAAGGTATATTGAAATGGCTACCATGTGTAATAGAGGGTGGGAAGTAACAGTTTGCTTATTAAATAGCGCACTACTtacaaattatattattttacgCCGACATCAGTGAACCAGATGCTGCTGTGGGTACTTTTTGCACGCCATTATTTTAGGAAAACAAGTTTTTGTTTCTTACTTAATTAAACTTCGGACTAAACAGTCTTGTAAATATATCTCTTAGTCATTGTTTATTTCCAACTCGTCTATTGTGTACTTTTGTATAAGGACTGCTTCATGTGTTTTCACCGTTACATGTGAATGTTTGGAAGAATACTGAATTGATGATGATGCTCATGGCCGTCACAAGGATGTGAAGATAATGTAGGCCCAGGGGGGAGTTTGCAGAAAAGAATGCATACAAGGGAATCGTAGTGTTACTGGTAACTTGTTTTTATCATTATACTATTTCCTCTGGTAACTggattaataataaaacattaaattaaatgaa

Function

symbol description
slc35b2 Predicted to enable 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity. Acts upstream of or within several processes, including osteoblast differentiation; proteoglycan biosynthetic process; and retinal ganglion cell axon guidance. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of Golgi membrane and integral component of endoplasmic reticulum membrane. Orthologous to human SLC35B2 (solute carrier family 35 member B2).

NR:

description
Transposable element Tc1 transposase

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process
GO:0030166 proteoglycan biosynthetic process biological_process
GO:0042476 odontogenesis biological_process
GO:0051216 cartilage development biological_process
GO:0030198 extracellular matrix organization biological_process
GO:0055085 transmembrane transport biological_process
GO:0001649 osteoblast differentiation biological_process
GO:0006024 glycosaminoglycan biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15276 SLC35B2, PAPST1; solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781485.1 True 2608 mRNA 0.47 4 23589968 23597399

Neighbor

gene id symbol gene type direction distance location
rnf8 NA coding upstream 35702 23548578 ~ 23554266 (+)
mia3 mia3 coding upstream 50124 23522887 ~ 23539844 (+)
hlx1 hlx,LOC102784911 coding upstream 194632 23391206 ~ 23395336 (+)
slc35f6 slc35f6 coding upstream 208754 23371884 ~ 23381214 (+)
kcnk3a kcnk3,LOC102784354 coding upstream 241612 23307723 ~ 23348356 (+)
rbm25b rbm25,LOC108233444,LOC103353665,LOC102789801 coding downstream 13610 23611009 ~ 23624138 (+)
atp6v1d atp6v1d coding downstream 43476 23640875 ~ 23644644 (+)
tmem121ab tmem121,LOC101465360,LOC102792477,LOC107377718 coding downstream 432654 24030053 ~ 24068592 (+)
nt5c1bb LOC104946496,LOC101163217,LOC103359106 coding downstream 609927 24207326 ~ 24215960 (+)
si:dkey-174m14.3 LOC102302461,LOC103359114,LOC101468873,LOC102795766,LOC102194912 coding downstream 627658 24225057 ~ 24252680 (+)
LOC120546283 NA non-coding upstream 83404 23475699 ~ 23506564 (+)
G186841 NA non-coding upstream 150448 23438240 ~ 23439520 (+)
G186843 NA non-coding upstream 154617 23435136 ~ 23435351 (+)
G186842 NA non-coding upstream 157585 23420899 ~ 23432383 (+)
G186747 NA non-coding upstream 314508 23268798 ~ 23275460 (+)
G186882 hsp90ab1 non-coding downstream 5237 23602636 ~ 23607535 (+)
G186901 mpp5 non-coding downstream 50180 23647579 ~ 23649568 (+)
G186902 mpp5 non-coding downstream 52997 23650396 ~ 23658430 (+)
G186905 gphn,LOC106608213 non-coding downstream 69538 23666937 ~ 23668127 (+)
G186954 NA non-coding downstream 232126 23829525 ~ 23861934 (+)
nfkbie nfkbie other upstream 279 23578378 ~ 23589689 (+)
tcte1 NA other upstream 25539 23559498 ~ 23564429 (+)
rsph3 rsph3 other upstream 392972 23192638 ~ 23196996 (+)
ppp2r5a ppp2r5a other upstream 447328 23095912 ~ 23142640 (+)
dtl dtl other upstream 494463 23087820 ~ 23095505 (+)
G186975 NA other downstream 482204 24079603 ~ 24083104 (+)
LOC120547070 NA other downstream 547598 24144997 ~ 24146762 (+)
extl3 extl3 other downstream 558088 24155487 ~ 24187864 (+)
G187094 bpnt1,LOC102799416 other downstream 909514 24506913 ~ 24507813 (+)
lama2 lama2,LOC104942190 other downstream 1212680 24810079 ~ 25009457 (+)

Expression


Co-expression Network