Gene
RNA
| Item | Value |
|---|---|
| gene id | atp6v1d |
| gene name | atp6v1d |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 23640875 ~ 23644644 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| atp6v1d | Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to act upstream of or within ion transport. Predicted to be part of proton-transporting V-type ATPase complex. Is expressed in several structures, including blood; epiphysis; liver; mucus secreting cell; and yolk syncytial layer. Orthologous to human ATP6V1D (ATPase H+ transporting V1 subunit D). |
| description |
|---|
| PREDICTED: V-type proton ATPase subunit D |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02149 | ATPeV1D, ATP6M; V-type H+-transporting ATPase subunit D |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039781493.1 | True | 1488 | mRNA | 0.45 | 9 | 23640875 | 23644644 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rbm25b | rbm25,LOC108233444,LOC103353665,LOC102789801 | coding | upstream | 16737 | 23611009 ~ 23624138 (+) |
| slc35b2 | slc35b2 | coding | upstream | 43476 | 23589968 ~ 23597399 (+) |
| rnf8 | NA | coding | upstream | 86609 | 23548578 ~ 23554266 (+) |
| mia3 | mia3 | coding | upstream | 101031 | 23522887 ~ 23539844 (+) |
| hlx1 | hlx,LOC102784911 | coding | upstream | 245539 | 23391206 ~ 23395336 (+) |
| tmem121ab | tmem121,LOC101465360,LOC102792477,LOC107377718 | coding | downstream | 385409 | 24030053 ~ 24068592 (+) |
| nt5c1bb | LOC104946496,LOC101163217,LOC103359106 | coding | downstream | 562682 | 24207326 ~ 24215960 (+) |
| si:dkey-174m14.3 | LOC102302461,LOC103359114,LOC101468873,LOC102795766,LOC102194912 | coding | downstream | 580413 | 24225057 ~ 24252680 (+) |
| LOC120546721 | NA | coding | downstream | 614904 | 24259548 ~ 24278489 (+) |
| rngtt | rngtt | coding | downstream | 634776 | 24279420 ~ 24376144 (+) |
| G186882 | hsp90ab1 | non-coding | upstream | 33340 | 23602636 ~ 23607535 (+) |
| LOC120546283 | NA | non-coding | upstream | 134311 | 23475699 ~ 23506564 (+) |
| G186841 | NA | non-coding | upstream | 201355 | 23438240 ~ 23439520 (+) |
| G186843 | NA | non-coding | upstream | 205524 | 23435136 ~ 23435351 (+) |
| G186842 | NA | non-coding | upstream | 208492 | 23420899 ~ 23432383 (+) |
| G186901 | mpp5 | non-coding | downstream | 2935 | 23647579 ~ 23649568 (+) |
| G186902 | mpp5 | non-coding | downstream | 5752 | 23650396 ~ 23658430 (+) |
| G186905 | gphn,LOC106608213 | non-coding | downstream | 22293 | 23666937 ~ 23668127 (+) |
| G186954 | NA | non-coding | downstream | 184881 | 23829525 ~ 23861934 (+) |
| G186961 | NA | non-coding | downstream | 223636 | 23868280 ~ 23925648 (+) |
| nfkbie | nfkbie | other | upstream | 51186 | 23578378 ~ 23589689 (+) |
| tcte1 | NA | other | upstream | 76446 | 23559498 ~ 23564429 (+) |
| rsph3 | rsph3 | other | upstream | 443879 | 23192638 ~ 23196996 (+) |
| ppp2r5a | ppp2r5a | other | upstream | 498235 | 23095912 ~ 23142640 (+) |
| dtl | dtl | other | upstream | 545370 | 23087820 ~ 23095505 (+) |
| G186975 | NA | other | downstream | 434959 | 24079603 ~ 24083104 (+) |
| LOC120547070 | NA | other | downstream | 500353 | 24144997 ~ 24146762 (+) |
| extl3 | extl3 | other | downstream | 510843 | 24155487 ~ 24187864 (+) |
| G187094 | bpnt1,LOC102799416 | other | downstream | 862269 | 24506913 ~ 24507813 (+) |
| lama2 | lama2,LOC104942190 | other | downstream | 1165435 | 24810079 ~ 25009457 (+) |
