selenol


Basic Information

Item Value
gene id selenol
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 27620131 ~ 27626987 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781506.1
gttcgcaaCTCTCACTTAAAGCaccaaaaatgattaaaaaaaaaatgtcagggtCTAATATTGCCAATGTTGTAATGTAATCCCTGTCTTGCTTATTGCCTACGCAGTGACATGGCACATATCGTCGTCCTGACCAATAACTATGTCCCTTTTTTGTCTCACACAGACTCCCTGGAGATGTTTGTCCCAGATAAGATCACCATTCTACTCGGCCTGATGGCAGCGGGAACAGACTTCTACAAAAGCCTCGgagtgaagaagaagagtgaAGCTGAGGACCTTTGGCAGAAGTCTTATCACCATGTAGCAGTGAGAGAACAGGTGGAGGAACTTCTGCAGCTGGAGagtgagTGGGACTCCTTCCTGGAGAGCGTGGACAGAGGTCTGCGGACAACAGACGGACAGCTGGCAGGAGGACAGATAGCAGACAGCCTGAGCCCTGATACTGCGTTCACTGATGGACGGAGTGCAAAGAGCGTGACTCTGGGTCAGTTCCTGGGTCAGGGTCAGAAGCTGCTGCTGGTCCTCATCAGACATTTCAGATGACTGCTGTGACGAGACCACGTGGCCGAGCTGGAGGCCAGTCAGGTATACAGGAGTTTTGGCCTCGACTCGTCCTACGCCAAAGTGATGAGGTTTGGCTGCCTGCTCAAGTACTCCGAGTACGGAGCTGTGGACAGAGACTTCCCCGATGTCCCCCCTCACCTGCTGGAAGATATGTACCAGGTACAAATGGACAACCAGGTACAAATGGACAACCAGATGGGAGGTGACTTTTTGCTGGATGACACGGGGAGGGTCCTTCTTTCTCACCCGTCTAAAAACCCAATGGACAGGCCGAGTGTGAAGGCCGCCCTGCAGGCCGTGGACCCTTCAGGCTCCTCTCTGTGAAGAAACTACAAGCTGTAAAAGATATGTGAACATTGGAGACACTCAGGGGGTTTAagtggttacattttttttcccatcacTGGCACCGCAGAGGAAGAGCAGCTCTTTGACTCACGTTTATGACGTCACGTCTCGCACTCATGACACCATGAAGAGGTGTGACTGATGCAGAACTGTAAGCAAGGACAACTGATCTCCTTTGTTGTGTTAGTGTTGTGATGAGAGCATTTTTAAATTAGTGGATTACAGTGTAATTCAATATAAAGTTACTTTTATATAATACCAATGgtatttaacttaaaaaaaactgattttagAAACTGATTTAAGCAATTGTACTGTAATCTGTAATGTCAGACTGTACGGCAtttcttaaaggtgcagtaggtaagccttataaaactaactttctgtcatatttgctgaaattgA
>XM_039781507.1
gttcgcaaCTCTCACTTAAAGCaccaaaaatgattaaaaaaaaaatgtcagggtCTAATATTGCCAATGTTGTAATGTAATCCCTGTCTTGCTTATTGCCTACGCAGTGACATGGCACATATCGTCGTCCTGACCAATAACTATGTCCCTTTTTTGTCTCACACAGACTCCCTGGAGATGTTTGTCCCAGATAAGATCACCATTCTACTCGGCCTGATGGCAGCGGGAACAGACTTCTACAAAAGCCTCGgagtgaagaagaagagtgaAGCTGAGGACCTTTGGCAGAAGTCTTATCACCATGTAGCAGTGAGAGAACAGGTGGAGGAACTTCTGCAGCTGGAGagtgagTGGGACTCCTTCCTGGAGAGCGTGGACAGAGGTCTGCGGACAACAGACGGACAGCTGGCAGGAGGACAGATAGCAGACAGCCTGAGCCCTGATACTGCGTTCACTGATGGACGGAGTGCAAAGAGCGTGACTCTGGGTCAGTTCCTGGGTCAGGGTCAGAAGCTGCTGCTGGTCCTCATCAGACATTTCAGATGACTGCTGTGACGAGACCACGTGGCCGAGCTGGAGGCCAGTCAGGTATACAGGAGTTTTGGCCTCGACTCGTCCTACGCCAAAGTGATGAGGTTTGGCTGCCTGCTCAAGTACTCCGAGTACGGAGCTGTGGACAGAGACTTCCCCGATGTCCCCCCTCACCTGCTGGAAGATATGTACCAGGTACAAATGGACAACCAGATGGGAGGTGACTTTTTGCTGGATGACACGGGGAGGGTCCTTCTTTCTCACCCGTCTAAAAACCCAATGGACAGGCCGAGTGTGAAGGCCGCCCTGCAGGCCGTGGACCCTTCAGGCTCCTCTCTGTGAAGAAACTACAAGCTGTAAAAGATATGTGAACATTGGAGACACTCAGGGGGTTTAagtggttacattttttttcccatcacTGGCACCGCAGAGGAAGAGCAGCTCTTTGACTCACGTTTATGACGTCACGTCTCGCACTCATGACACCATGAAGAGGTGTGACTGATGCAGAACTGTAAGCAAGGACAACTGATCTCCTTTGTTGTGTTAGTGTTGTGATGAGAGCATTTTTAAATTAGTGGATTACAGTGTAATTCAATATAAAGTTACTTTTATATAATACCAATGgtatttaacttaaaaaaaactgattttagAAACTGATTTAAGCAATTGTACTGTAATCTGTAATGTCAGACTGTACGGCAtttcttaaaggtgcagtaggtaagccttataaaactaactttctgtcatatttgctgaaattgA
>XM_039781508.1
gttcgcaaCTCTCACTTAAAGCaccaaaaatgattaaaaaaaaaatgtcagggtCTAATATTGCCAATGTTGTAATGTAATCCCTGTCTTGCTTATTGCCTACGCAGTGACATGGCACATATCGTCGTCCTGACCAATAACTATGTCCCTTTTTTGTCTCACACAGACTCCCTGGAGATGTTTGTCCCAGATAAGATCACCATTCTACTCGGCCTGATGGCAGCGGGAACAGACTTCTACAAAAGCCTCGgagtgaagaagaagagtgaAGCTGAGGACCTTTGGCAGAAGTCTTATCACCATGTAGCAGTGAGAGAACAGGTGGAGGAACTTCTGCAGCTGGAGagtgagTGGGACTCCTTCCTGGAGAGCGTGGACAGAGGTCTGCGGACAACAGACGGACAGCTGGCAGGAGGACAGATAGCAGACAGCCTGAGCCCTGATACTGCGTTCACTGATGGACGGAGTGCAAAGAGCGTGACTCTGGGTCAGTTCCTGGGTCAGGGTCAGAAGCTGCTGCTGGTCCTCATCAGACATTTCAGATGACTGCTGTGACGAGACCACGTGGCCGAGCTGGAGGCCAGTCAGGTATACAGGAGTTTTGGCCTCGACTCGTCCTACGCCAAAGTGATGAGGTTTGGCTGCCTGCTCAAGTACTCCGAGTACGGAGCTGTGGACAGAGACTTCCCCGATGTCCCCCCTCACCTGCTGGAAGATATGTACCAGATGGGAGGTGACTTTTTGCTGGATGACACGGGGAGGGTCCTTCTTTCTCACCCGTCTAAAAACCCAATGGACAGGCCGAGTGTGAAGGCCGCCCTGCAGGCCGTGGACCCTTCAGGCTCCTCTCTGTGAAGAAACTACAAGCTGTAAAAGATATGTGAACATTGGAGACACTCAGGGGGTTTAagtggttacattttttttcccatcacTGGCACCGCAGAGGAAGAGCAGCTCTTTGACTCACGTTTATGACGTCACGTCTCGCACTCATGACACCATGAAGAGGTGTGACTGATGCAGAACTGTAAGCAAGGACAACTGATCTCCTTTGTTGTGTTAGTGTTGTGATGAGAGCATTTTTAAATTAGTGGATTACAGTGTAATTCAATATAAAGTTACTTTTATATAATACCAATGgtatttaacttaaaaaaaactgattttagAAACTGATTTAAGCAATTGTACTGTAATCTGTAATGTCAGACTGTACGGCAtttcttaaaggtgcagtaggtaagccttataaaactaactttctgtcatatttgctgaaattgA

Function

NR:

description
selenoprotein L

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781506.1 True 1323 mRNA 0.47 7 27620131 27626987
XM_039781507.1 False 1305 mRNA 0.47 7 27620131 27626987
XM_039781508.1 False 1287 mRNA 0.47 7 27620131 27626987

Neighbor

gene id symbol gene type direction distance location
ttc13 ttc13 coding upstream 2990 27592510 ~ 27617141 (+)
fam89a fam89a,LOC104954304 coding upstream 50861 27564976 ~ 27569270 (+)
sprtn NA coding upstream 62112 27553111 ~ 27558019 (+)
LOC120547108 NA coding upstream 67104 27549434 ~ 27553027 (+)
c18h1orf131 NA coding upstream 142056 27473216 ~ 27478075 (+)
tbc1d32 tbc1d32 coding downstream 46191 27673178 ~ 27750653 (+)
man1a1 man1a1,LOC102782693 coding downstream 374410 28001397 ~ 28162620 (+)
fam184ab fam184a,LOC101465847,LOC102781517 coding downstream 576643 28203630 ~ 28379848 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding downstream 754695 28381682 ~ 28383084 (+)
ncoa1 ncoa1 coding downstream 766120 28393107 ~ 28466873 (+)
G187779 NA non-coding upstream 44418 27532177 ~ 27575713 (+)
G187774 trim67,LOC102787511 non-coding upstream 90366 27529074 ~ 27529765 (+)
G187773 NA non-coding upstream 113544 27506306 ~ 27506587 (+)
G187772 NA non-coding upstream 115144 27504606 ~ 27504987 (+)
G187770 NA non-coding upstream 132709 27487164 ~ 27487422 (+)
G187803 NA non-coding downstream 33378 27660365 ~ 27660657 (+)
G187861 NA non-coding downstream 161398 27788385 ~ 27788602 (+)
G187872 NA non-coding downstream 257731 27884718 ~ 27981023 (+)
G187884 NA non-coding downstream 501579 28128566 ~ 28128922 (+)
G187878 NA non-coding downstream 536145 28163132 ~ 28166327 (+)
LOC120546215 LOC104930085 other upstream 581903 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 882328 26695430 ~ 26737803 (+)
G187574 NA other upstream 934624 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1167766 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1188734 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 912413 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1245699 28872686 ~ 28883121 (+)
G188063 NA other downstream 1259503 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 1483971 29110958 ~ 29132700 (+)
G188167 ucn other downstream 1507184 29134171 ~ 29136917 (+)

Expression


Co-expression Network