LOC120546560


Basic Information

Item Value
gene id LOC120546560
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16483296 ~ 16486939 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781550.1
AGccagaaggggggggggagtcaGCCAGGAGGGGACATGCATGAATGAAGGTTATTATCATGTCATGACATTACATTTTAGGTCAAAAGTGGAGCCATGTGGACAGACTTTGGGGTATTTTTCTCGGATTCGGCAAATATTTTGATTACGTCGGGAATACGCGCAGAACAGTGACGCTTTCAATAGTAGGACATTAATTTAGATGTAAAGCTATTTACAGAGATATACCGACAAAATGTTGCCTTTGAGCGCGTGTTTATCCGGTGCTTTTGTGGTCAAaaaatttagatttagatttatgtCAGGTGacatttgtgtatatatacacacacacacacatacatacacacacacgcacacacacacacacacaaaatggaccTTGTGGTGAGATTATTTTGTTTAAACATGGAAGGTTTAttagaatatataatatattgtagTATAAACATTTAGGGTAAAAGCATGTGCTCACATATTAGTTGTTTTATCATAAAAATGACTGGGGTGGGAAAAATGCTTTGACTTTGACATCATGTTTGACAAATACTGTTATCCTAATCGAGTATGTGGAGTTGACACTGTTGCAGTATCTATATATGAAAAGTAGTCCTCAGGTTAGTTTTGATCATACAATGGTTTCActtctgtgaaagtgttgtggTGAAAGCAACAAACTTGCCGGAAAtaaaatttggaaaaaagcaTCAGATAATGAAGCCATGCAAAACGATGCAACGATGATGGAACTTCATTTGCATGTCAACAATACTGTTTCTTTGTGATTTCCTTTTGCAATGCATAAAAATGGAACATCTTGTTCCTCTAACTCGACTGACTGACACAATTTCCATCATCACTCGCTCGGTGCACATTCAGCTTGTCTGGCAGCAAGTTTGCAGCATGGAACAACTCAACTCCACTGTGGTCATTtctaacatctcctcctctcctggACATCCATCTCCTGCCTCCTGGGACTCCAGCAGTCTGGCCCCTGCAGTGGTGCTGTCCCTCTGTTTCCTGCTGGGAGTTCCTGGAAACATCGCTGTGATCATCCTCAGACCAAACTGGCAGCACATGTCCAGTTTGAGCCAGATTTTGATGCTGAATTTGGCCATATCAGACCTGGTCTGCCTGCTCCCCCTGCCCCTGTGGATTTACACTTTACTGTACAGTTGGACACTGGGCCTGGTGGCCTGTAAGCTCCTATCATATTTGCTGTACTGCAGCCTTTATGGTAGCCTAATGACAGTGACAGTGCTGAGTGTCCAGCGCTACCTAAAGGTGGTGTACCTGCAGAGGTACTTCCATCACGTAGGATTAAAGAGGGTGCTGGTTCTGCTCTGGCTGGCTGCAATGATCCTGTCGATCCCAGGTTTAGTGAATGGACAGTTGACCCCAGACCAGAACTGGATACGCTGCAAGTTTCGCTACTCTTCCCCGGCCCAGCAGGAGGCCGTGCTGCTGACAGAAACCCTGACAGGATTTCTTTGCTGTTTTGTCGTGGCATTTTCATACATCGGCCTTCACAGAAAAGTGAACCAGGCAGCTTTCTTCAACCACGCACAGACCACCCGGCTGATCACAAGTATTGTCGTGTCCTTTTTTGTCCTATGGATGCCATATCATATCACAAATGTGCTTGGCGTGGCTGCTGTTTCTCTCAAAAACAAAGGCCTGTCTAAGTTTTACACGGACAACAGGGACATTGTTGGAGCACTGGTATTTGTGAATAGCTGCCTGAATCCACTCCTTTATGCATTTGCGTTTAGAAACAAGTGCACTGTGTGCCAGAAAAGAGAACATTAATACTGTTGTTATTATGCAGAAGCTCACCGTTCCAGGAAGTCTAATCATTTGATTTAGTATGATCGATGAAAAGCCACCAGAGCCCAGATCCTGAAATAAGGTGTTTTTAGTCGAAATATCTAATCTTCCCTGCTGATTCACAGTTTGAGGGTGTGGTTCTCTCATTTGTAACAGAGAGCTGTGCATGATTTGTGGTATAATGAGGATTTTTTTGCTGATTACAACTGGTCCTCAGCCAGAgctgtaaaaataaaggtttGGTAAAATGAATCAGGCAAAGAGTTAAATAACAATGTGGAAATTATTGATTCATTTGCATTTAGAATACAACTTTGATTTCCTGTTCAACAtatgtttttaatgaatttagGTCATAATCTacagaaatatgtttttctaCTTCATCCATCATAcatgtattttttgtgtgtgtgtgtgtgtgttgtggatgTGTATGTGGTAAAACAACCCTTTCTTACTGATAATTACATTTTCTATCACATCTTAGCTTTTAAGGGAACAATCCAGTCAGAGGAAACAACAGTTAATGTAAAGATTGAATAAATGTTTGTGTTGGAGGGCATCCAACAAGAGGAATGACCATTTGTCTCTAATGTTTAgcaacagacatacacacaagaGGAAGGATATTGAGAGAGGAAGAGTGTGCTCTACTGATAATACCAGCAGATGTATAAACTAATTTATTGATTCCTTTATTCTTCTTCCTTTTGTCTATGACAAGTAGAAGCTAGACATATTGTCAGGCAGACTATTTCAGCTATTGTgttttgtatattgtatatatgtttgtttcCAGTAAACTGTGAAACACTGTAACAtataaaatgttacataaaacaaaagatATACAAGGATGAGATTGATAACCACTCATGTGTGGTAAATacaaagctacagccagcagctggctAACTTAGCACTAATCTGTTATCTTACCAGAGgctggctagctgtttccccgtttccaatcattatgctaagctaagctaaccggctgctggaaGTATCTTCATATTTatcgtacagacatgagagtggaaTCAATCTTCTCGTCTAACTCGCAGGAAGTAagaagtacagaagtattatcagcaaaatgtacataAAGTATCAAAAGGAAAAGTGCAGATAAATGTCCCTGCCATGTGACTGTTACAGTAGGCTATAtgattattaaatctttaaataaCTATTACTGATAAGTAAGCAGTCTTTTACTTTTGTAGTTGGTTGAGGTTGATGTCATTTTAACTagtttactgtaactgtagtttatatattttgtacagtatgtaactAACCAGAAACTAACAGCTGTCAAATAATTGCAATGGggtaaaagtacaatattctCTTCTTAAGTGAAGTGaggtagaagtataaagtgacATAAAATGgaagtataaataccttgttttttatgtacagtacttgagtacacGCTAACTGTTTATAATCAACTCTTTCTGTGACTGTGCTCAAATATTATGTTGGTCATTGTGAGGATGTCTTCTTCCTGGCTTCTCGCTACCGGCTTCTCGGTGCGTGACACATTGCAAAAACTAGGGCGACGGGCGCTCACCGTCGGCCCGACTTGGACCCATGGCCAACGGTCTACTTGGTGTGCCAGCACCTTTAACGGTACATGAGAAGCTGTCTCCCCGTGCAGTAGCAGTGTGCTTCCAAATATTCTTCTAGGGAATTTCTTTGTTATTGTTAAATGTTTCACTTAATTTCCTTTACGGCCTATGTGAATATGCTTAATTGCTGtgcagatcattttttaaataaagctcTTTGTTGTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781550.1 True 3644 mRNA 0.40 1 16483296 16486939

Neighbor

gene id symbol gene type direction distance location
elovl4b elovl4 coding downstream 56415 16418550 ~ 16426881 (-)
LOC120547269 soga3,LOC102312356,LOC102202636,LOC101478077 coding downstream 68099 16409299 ~ 16415197 (-)
LOC120547270 LOC104949332 coding downstream 74005 16401262 ~ 16409291 (-)
hddc2 hddc2 coding downstream 104127 16375886 ~ 16379169 (-)
LOC120547182 trdn,LOC103371166 coding downstream 251395 16208259 ~ 16231901 (-)
ngs NA coding upstream 36764 16523703 ~ 16527573 (-)
pou3f2a LOC100689997,LOC102789413,LOC101473289,LOC102290139,LOC103363798 coding upstream 71858 16558797 ~ 16561011 (-)
mrps18a mrps18a,LOC102788828 coding upstream 122925 16609864 ~ 16613070 (-)
naga naga,LOC104944830,LOC101471811 coding upstream 233585 16720524 ~ 16728437 (-)
si:ch211-57i17.5 LOC101467041,LOC102294206,LOC104964595 coding upstream 296110 16783049 ~ 16784901 (-)
G184762 NA non-coding downstream 48783 16434101 ~ 16434513 (-)
G184755 NA non-coding downstream 100817 16379445 ~ 16382479 (-)
G184731 NA non-coding downstream 126729 16291390 ~ 16356567 (-)
G184730 NA non-coding downstream 231427 16250197 ~ 16251869 (-)
LOC120546331 NA non-coding downstream 338127 16125385 ~ 16145169 (-)
G184813 NA non-coding upstream 35795 16522734 ~ 16523699 (-)
LOC120546751 NA non-coding upstream 109832 16596771 ~ 16605917 (-)
G184869 NA non-coding upstream 186649 16673588 ~ 16675507 (-)
G184877 NA non-coding upstream 222816 16709755 ~ 16762688 (-)
LOC120547094 NA non-coding upstream 224096 16711035 ~ 16716317 (-)
LOC120546332 akap7 other downstream 294966 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 414987 16065854 ~ 16068309 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other downstream 687658 15788826 ~ 15795638 (-)
rps29 NA other downstream 1371817 15110240 ~ 15111479 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other downstream 1815695 14657177 ~ 14667601 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 3711 16490650 ~ 16517874 (-)
gpatch2 gpatch2,LOC102785715 other upstream 338713 16825652 ~ 16835983 (-)
LOC120547341 NA other upstream 779420 17266359 ~ 17269634 (-)
tbpl1 tbpl1 other upstream 1136185 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 1277866 17764805 ~ 17766910 (-)

Expression


Co-expression Network