LOC120546584 (prep,LOC100698444,LOC102792678,LOC104927043)


Basic Information

Item Value
gene id LOC120546584
gene name prep,LOC100698444,LOC102792678,LOC104927043
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 22258597 ~ 22270747 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781600.1
CAAAGTGCTTGTTGGCTGTGTGTAAGCAGGGCATCTTTTCCTGTCAAACGCTTCAGTGCATTAGTTGATGTTTTACAGGATCCAGAGGGTCATTTCTAAACCATTATTTCAGTCTCTGGGGCAACTTTTTTTCTTACGCAATTCCCGAAAACTGACCTCCAAAATGGCTTTTCAGTATCCACAGGCTTACCGTGACGATGCAGTTGTGGATAGCTATCATGGCTCCAAAGTACCAGACCCATACAGCTGGCTGGAGGACCCGGACAGTGAAAAGACACAGGCTTTTGTCAGCTCTCAGAACCAGCTGACATTGCCGTTTTTAGAGCGCTGTGAGGTGCGAGACCTGTTCAAGGAGCGCATGACTGAGCTGTATGACTACCCCAAGTATAGCTGTCCCTTCAAGAGGGGGAATAGGTACTTTCACTTCTACAACACAGGCCTCCAAAACCAGAGTGTGATGTACGTGCAGGAGAGCCTGGATGCTGAGCCCACAGTCTTCTTGGATCCAAACACATTTTCTGATGATGGGACTGTTGCCCTGCGAGGCTATGCATTCTCTGAGGACGGTGAGTATCTGGCATATGGCACCAGCGCCAGTGGATCGGACTGGGTGGAGATCCACTTCCTGCAGGTTGAAGGCGCCAAGCCTCTGGAGGACCACCTGGAGCGAGTCAAGTTCAGCTGCATGTCCTGGACTCATGATGGGAAGGGACTTTTCTACAACTCCTACCCTGAGCAGGAGGGCAAGAGTGACGGCACTGAGACCTCCACCAACCTCCACCAGAAGTTATACTTCCATGTTTTGGGGACTCCGCAGTCTGAGGACGTGCTGTGCGCCGAATTTCCTGACCACCCCAAATGGATGGGTGGAGCAGAGGTATCAGACGATGGACGCTACGTGCTGCTGTCTATAAGGGAAGGTTGTGATCCGGTCAACCGACTGTGGTATTGTGACCTTAAGACCACTCCTCAGGGTATTACAGGACTTTTGCCATGGGTGAAGCTGATCGACAACTTTGATGCCGAGTATGAGTACGTGACCAACGAGGGCACGCTGTTCACATTCAAGACCAACCTGGATGCCCCGCGTTACCGCCTCATCAACATCGACTTTGCCTCTCCAGCTCAGAGCAACTGGAAAGAGCTCATCCCTCAACATGACAAGGATGTTATTGTGTTTGCCACCTGTACATACTCCAGCtacctgtttgtgtgtttcctcCACGACGTGAAGAATGTGTTGAAAATGTACCGTCTGAGCTCGGGGGAGGAGCTGAGGACGTTCCCTCTTGACGTGGGCTCCGTGGTGGGTTTCACAGGACGGAAGAGGGACTCCGAGATCTTCTACTATTTCACCTCCTTCCTCTCCCCAGCCATCATTTACCACTGCGACCTGACTAAGGAGCCGCTGCAGCCCCACATCTTCAGAGAGGTCACTGTCAAAGGCTTCAGCCCCTCGGACTACCAGACCACCCAGATCTTTTATCCCTCCAAGGATGGCACTCAAATCCCCATGTTTATCGTTCACAAGAAAGGCATCAAATTGGATGGCTCCCATCCAGGTTTTCTATACGGCTATGGTGGTTTCAACATCTCCATCACGCCAAGCTACAGCGTCTCCCGACTCATCTTTGTCAGACATCTGGGGGGAGTATTGGCTGTTGCCAACATTCGGGGAGGAGGAGAGTACGGGGAGACCTGGCACAAAGCTGGCATGCTGGCCAACAAGCAGAACTGCTTCACAGACTTCCAGTGTGCAGCTGAATATCTCGTCAAGGAGGGATACACTTCTCCTTCCAAGCTGACTATAAATGGAGGCTCTAACGGTGGCCTGCTTGTAGCGGCCTGCGTGAACCAGCGGCCCGAGCTGTTCGGCTGTGCTGTCGCTCAGGTAGGCGTCATGGACATGCTGAAATTCCACAAGTTCACCATCGGCCACGCCTGGACCACAGACTTTGGCTGTTCTGAAGACAAAGAGCAGTTTGATTGGCTCATCAAATACTCCCCGCTCCATAACATCTGCATCCCAGAAGGCAACGGGGTCCAGTACCCTGCAGTGCTACTGCTCACAGGGGACCACGATGACCGGGTGGTGCCTCTCCACTCCCTCAAATACATCGCCACCCTGCAGCACATTGTAGGCCGCAGCCCCAAGCAGACAAACCCTCTGTTCATCCTTGTGGACACAAAGTCAGGCCACGGCGCCGGCAAGCCCACCAGCAAGGTCATCCAGGAGGTGGCCGACACCTACGCCTTCATCGCTCGCTGTCTCAACATCTCCTGGGTCAAATAACCTGCGCCTCccattaaagtgtgtgtgtgtgtgtgttttcttttattttgttcctTTTCTCACACCATCTTCTGAATACTGTTCATATCATCAGCTGTTCACACTTTCTTTATAACTTCACGCCAACACCGTGCCGGATCTTTCAACTCATGTTTACCCAGCCACCATCACTGcatcttttatttttgtctttgtggtTATCTATTTTTGTCTCTCTCCGTGTGAGCCTGTTACAGACTCCATCAGGATCTGCCCCATCTGCAGCACTCACAGCTAACGTACCCTCTCCTGTACTGTAGGCCAAGTTTGTAGTCCTAATGAAACAAAGAATGACTACATTGTCAGTGATGGGTGTGTAAAGGGAGGGGGTACTTTCACGGTTACAgtaatcagccaatcagcagttACTGTCATGAGGTCGAAGTGGCAAAGGTTTATTTGAACATTGTTTCTGTGTCCTTTGGGTGCTTAAACATGatgcatattatttattttacgtTAGTGCACAGAATGTAGGCTGTGGGACATTGGATGGCGCCCAGCATGAACAAGTATAGTGCAAATGACACCGCAAGTTGACAGTATTGCTGTGGATGTGAGTGCGGAAACtcataaaaacaaactgtgtgtgtgtgtgtgtgtttgtgtgtccccaCATTTATTTCAGACTGATAATTATTTCTACCTCTTGACATGTGCTGATTGTTTGCCTTTTAAAGGGAACAAAACACAATGCCACAACTACAATAAACAACTTTTTAAACAGTGA

Function

symbol description
prep Predicted to enable endopeptidase activity and oligopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in cytosol. Orthologous to human PREP (prolyl endopeptidase).

NR:

description
PREDICTED: prolyl endopeptidase

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0070008 serine-type exopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01322 PREP; prolyl oligopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781600.1 True 3062 mRNA 0.50 14 22258597 22270747

Neighbor

gene id symbol gene type direction distance location
LOC120546308 NA coding upstream 37452 22212510 ~ 22221145 (+)
LOC120546953 eva1a coding upstream 47120 22132841 ~ 22211477 (+)
smek1 ppp4r3a,LOC102789800 coding upstream 296926 21947299 ~ 21961671 (+)
paplnb NA coding upstream 314515 21938478 ~ 21944082 (+)
LOC120547078 NA coding upstream 415041 21834478 ~ 21843556 (+)
LOC120546233 sim1,LOC103374615 coding downstream 167974 22438721 ~ 22450064 (+)
LOC120546368 mrap2 coding downstream 211173 22481920 ~ 22484901 (+)
LOC120546366 LOC104963849 coding downstream 218299 22489046 ~ 22515691 (+)
LOC120547088 LOC104956167 coding downstream 270659 22541406 ~ 22553765 (+)
LOC120546968 LOC103362669 coding downstream 284113 22554860 ~ 22585207 (+)
LOC120547080 NA non-coding upstream 424815 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 512043 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 715816 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 783293 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 910016 21347944 ~ 21348581 (+)
G186452 NA non-coding downstream 23695 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 264912 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 446223 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 528988 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 576125 22846872 ~ 22847674 (+)
G186394 mycn,LOC108233328 other upstream 193008 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 311597 21944743 ~ 21947000 (+)
gtf2h5 gtf2h5 other upstream 1085958 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2398380 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2610441 19633500 ~ 19648156 (+)
lin28b lin28b other downstream 10220 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 537132 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 691286 22962033 ~ 22966010 (+)
dtl dtl other downstream 817073 23087820 ~ 23095505 (+)
ppp2r5a ppp2r5a other downstream 825165 23095912 ~ 23142640 (+)

Expression


Co-expression Network