LOC120546588 (dpysl5)


Basic Information

Item Value
gene id LOC120546588
gene name dpysl5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 26796434 ~ 26830996 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781613.1
TTGGTCTGCACGTTACATATTACATTTAGTCATTAAGAACATCCACAATTCGTATAATCAGTTGGATTATAAACTCATCAGGTACTAACAGCAATAGTTCCGACAGCATTTGAAGGCAAAATAAGTCTCTGGAGGCAGGGGACACGCCCCTGTCTACTGAGGAGAGAAGACCCATCCGCTAGACACATCTCGTCTCCTATTGGTCTGTTTTACCGTTGCTCAGATTCAAGCGgctcctgattggctgctgccGGACTGTCGGCGTTAAAGCATCTGAGGCTCGTGCTGTGCCAGCTGTCCTCCCGCACTCGGCTAGTGCTGGGCAACGGTGTGAGTCTCCTGCTGAGGAGGATCTGAGAATCTGGAAGAAAAAGGGACTATGGCTGCCAACGTGGGGTCGATGCGTATCCTCATTAAAGGAGGGAAGGTGGTCAATGATGACTTCACCCAGGAAGCAGATGTCTACATTGAGAACGGCATCATTCAGCAGGTTGGAAAGGAACTGATGATACCAGGCGGAGCCAAGGTGATTGATGCCTCTGGAAAGCTGGTGTTGCCGGGTGGAATAGACACCAGCGTGCACCTGCAGCAGACTTTCATGAACGCCAGCATTCAGGATGACTTCTACAGTGGGACAaagGCCGCACTGATGGGTGGTACCACCATGGTGATGGCTCTGGCCCTGCCTGAACAACACTGCTCCCTGCTGGACACCTACGAGAAGTGCCGAGCTCTGGCCGACGCCAAGGCGTGCTGCGACTACGCTCTGCATGTCGGGGTGACTTGGTGGGGGCCGAAGGTCCGTAGCGAGATGGAGACCCTGGTGAGAGAGCATGGAGTGAACTCTTTCCAGATATACATGGCATACAAAGATATGATGATGCTAAGAGACTCTGAGCTCTACCAGACGCTGCAGACCTGTAAGGACATCGGGGCCATCGCTCGCGTCCACGCTGAGAACGGAGAGCTGGTGGCAGAGgGTGCCAAAGAGGCTCTGGATTTGGGCATCAGTGGACCGGAGGGCATTGAGATCAGTCGACCAGAGGAGCTGGAGTCTGAGGCTACTCACAGAGCTGTTACTATCGCCAACAGGGCTCACTGCCCGATCTACCTGGTGAATGTGTCCAGTATTTCTGCTGGAGACATGATTGCTGCTGCTAAGATGCAAGGCAAGGTGGTCCACGCAGAGACCACGGTAGCTCACGCTGTGCTGAACGGGATGCACTATTACCACCAGGAATGGGCTCACGCTGCCGCCCACGTCATCGTCCCTCCTCTCCGTCTCGACCCCAACACACCTAGCTACCTCATGGGCCTGCTGGGCAATGACTCTCTGAGTGTCGTAGCATCAGAGCACCGTCCGTTTAGCACCAAGCAGAGAGCTTTGGGCAAGGAGGACTTCACAAAGATCCCTCATGGAATGTCTGGAGTCCAGGACAGGATGAGTGTCATTTGGGAGAGGGGAGTgGTTACAGGAAAAATGGATGAGAATCGCTTTGTGGCAGTGACGAGCTCTAACGCTGCAAAGATCTACAACCTGTATCCACGCAAGGGTCGTATCATCCCCGGGGCTGATGCTGATTTGGTGGTCTGGGACCCGGACGCAACGAGAACGATCTCTGTGAGCACTCAGGTGCAGGGCGGAGACTTCAACCTGTACGAGGGGATGCGTTGCCATGGTGTTCCTCTGGTCACCATCAGCCGAGGGCGTTTGGTATGTGAGAACGGCGTGTTCATGTGTGCCGAGGGATCCGGAAAGTTCTACCCTCAGCGCACCTTCCCTGACTACCTCTACAAGAAGATGGTGCAGAGAGAAAAGACTCAGACTTATAAAAGGGTTGACAGGGATCCCTACTCCGGTGATGTGGCCAAGGTGGCAAACACTATGAAGAAGGAGCTCGGTTTGGGCCACATAGACGGGGAGGCGTCTAACAAAGCCTGTCCTCGCGCGCACCAGGGAGTCCGAGACCTCCACGAGTCCTCCTTTAGCCTCTCAGGTTCTCAGGTCGATGACCACATCCCCAAGAGGTCCTCGGCCCGGATCCTGGCCCCTCCTGGCGGTCGCTCAAGCGGTATCTGGTAATCGCTGCTGCCGGAGCTTCACCCGTCCGAGCCTCCTTGTTTTGTATGATTCTGCGCAACCAGGAAAACTGCACTGATTTTCAATCACAGGACTAAAGTAAAGAGAGGAAAATAAATTGAAGCACGCTGATGATCAGTGATTTGCCAAAGTGACTTTTTACAAATCTAATTTGTGTCTTAATTGGAGTGACTGACCTGAGTAATAACGCGAGAGTGAAGGGCTACCtatgaatttaaaatgttttgccaAATTCAAGCTGATCATACTAACATTGACAAAGTCTGCTCATTATCACCCTGCTCGTATCCCGCGAAGAAACGCAAACTAAACAAACTGTGAAAGATCAAAACCAGTACAGTTTttgatggtttgacctgaagTAATGTCGactgaattatttaaaaaatagtgGAACTGGATTCAGTGAAATATCTATTATACCCcctgtcatacacacacacacacacacacacacacacacacacacacacatatccagtACACTGTAGACACCATAGCTTTAGACTCATATGCAGATGTGTGTGGATTCTGTTTGTGATTAAACACCCGCTGTGCTCGGCTTCCTGCAGCACCGTGGGTTCCTCTAACAGTGTTTTTATTTCCAATGGGTGAACTGTGCTGTGTGGTGATGACATCCAACTGCTTCAAACACTGTGTGATTTTACAGCTACACTCTGTAAATAGAGTCAGACCTGACCCTATCCATCCTTATATTTTCACTGCCTCTGACTGAAACAACACATATCCCAGAAACATCCTGCCTCACCTGCAATGGCGCAGGGTCTATAGACTTAGACTCTATAGACTATAGACAGAATTATACAACCTGTGGCCTGCTCTGGGATTATAACTGGTCCCAAAACAGCTAAATGTAGTCCTTTCTGTCATGGAAGCGTGGTATTTATAGATCTTGCCAAGTACTACTGTAGAAGACTGAAGAGAAGTTGGTTTCTTGAAGGGAAGAGTAAGTGATTTAAGGTTTACAGTGGGGATAACAAGAAGGAAAAGCTTTCTGTTTCTTTGCTGCTGATAATACAGAATGCTTGATTTACATCAATAAAGTTGAATGCAGTGCCTTCTCATACACTGGAGAGATCACTTGGAGCTTTCTGAGTGAAAACAGGAGCTGCTAAAAAacaccaggggcctcatttgtCAAAATGTGCATAAAACAAGCTTAAATCCGTGCGTAATAGATTTCCCATAAGCATAAGAAAGATTTAATTCAACTAAAATGATCGTGAACAGGCTAATTTACATAAAGAAAAAGTGTTGTATCCTCAATAACAGCTCCACGAAGCGTTTGAGTGTCTTTCCGCTTATTGTTTTGCTTTTACAGCCCACAGCTTTACTGTTTCCTAAACTCACCGTACGTACACCGAGCCCTTCCAGCACCAAtcgacagacagacggacaaagttagcaactagccaGTGAAGAAAGTGGAATATTTAGCAGCTAAGGAGATGAAGAGGAGTTTCCCTCAGGTCCTGGTGGAGGCCGAAACAGCGTTAGGAGAGTGAAAATAGGACTTTGATTAACAAGTCGCcgttaatgcagctttaatgacAGACTATTGACTATTTGAAGGACTATTTGAAAAATGTAGCaactaaagaaagaaaaggacaaACATCAGAGACAATGGGGTTGAGATATGGCTAAATACAGTTCAACAAAACCAGAAGGTTTTATTTGGTACTTTCAAGTGGCTTGTCCATAAGACTTTCATTTAAGAGCAACAACATTGTTAGGTTTAATTTAAGTATGTATGTTACGTTTACAGTTTATGTACAAAATTGTCCGTACGCACAgttgataaatgaggccccagatTGTGCATAGAGGGCCCCGAAAGTTACCGTAATAAATGACATGATGATGTTTTTTGAAAGTAAACTTCCTGTTTGTAGAAAAACAAAAGGGATTTATTGTTCTAAGAGCAGTGACTCCACAGAGCAGGAAGATTGAGTTGCACAGTCTGAAGAAAAACCCACTGATCCTTTCACTTCCTGATGATGTCTCATTCCTGCCTATCAGTATTATATTTATACATGATCACGTCTTCTCGTCTGTGAACTATATATTTaggatgtttgtttgtttggttttttagCTGAAAGAGTAAATGTGCCAATGTGAATCACCCGTGCAACACCCACACCCATGCATGAAGAGCACCCCATGGAGACGGAGGAGTTAAATCTCTCCACAGGCTCACAACAACTGGTGCTGTTTTTTTACTATTGCCTACGACAACGTTATTTAACTGTTGGatggttttgttgttttgaagGCACTGTGACTGGTTGTGTGTTTGTAGATTCTTGTTGTGTTGGACAGTGAAACTGTTGAATCTGTAAGTGGCTGCTTGTTTCTTACCACATGTtaacagcaaaataaaataataatacaaatatcaA

Function

symbol description
dpysl5 Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds and microtubule binding activity. Predicted to be involved in nervous system development and signal transduction. Predicted to be located in cytosol.

NR:

description
PREDICTED: dihydropyrimidinase-related protein 5

GO:

id name namespace
GO:0006208 pyrimidine nucleobase catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG:

id description
K07529 DPYSL5, CRAM; dihydropyrimidinase-like 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781613.1 True 4527 mRNA 0.47 14 26796434 26830996

Neighbor

gene id symbol gene type direction distance location
LOC120546585 dnmt3a,LOC103381119,LOC103355283,LOC106945224,LOC101063003 coding upstream 3630 26733362 ~ 26792804 (+)
LOC120547317 kif3c coding upstream 113718 26660751 ~ 26682716 (+)
LOC120547357 NA coding upstream 138931 26657341 ~ 26657503 (+)
rab10 rab10,LOC102798439 coding upstream 144304 26633495 ~ 26652130 (+)
lats1 lats1 coding upstream 167870 26619981 ~ 26628564 (+)
LOC120546590 NA coding downstream 832 26831828 ~ 26842554 (+)
LOC120546589 mapre3 coding downstream 12776 26843772 ~ 26856893 (+)
tmem214 tmem214 coding downstream 29074 26860070 ~ 26878578 (+)
esco2 NA coding downstream 65384 26896380 ~ 26905243 (+)
trnat-cgu_2 NA coding downstream 150725 26981721 ~ 26981793 (+)
G187536 NA non-coding upstream 471700 26324516 ~ 26324734 (+)
G187535 NA non-coding upstream 480780 26315122 ~ 26315654 (+)
G187508 NA non-coding upstream 523839 26272368 ~ 26272595 (+)
LOC120547280 NA non-coding upstream 546749 26247778 ~ 26249685 (+)
G187431 NA non-coding upstream 829134 25967006 ~ 25967300 (+)
LOC120546372 LOC103909865 non-coding downstream 48450 26879446 ~ 26885536 (+)
trnay-gua_55 NA non-coding downstream 48537 26879533 ~ 26879621 (+)
trnaa-agc_21 NA non-coding downstream 49165 26880161 ~ 26880233 (+)
trnaa-agc_22 NA non-coding downstream 56138 26887134 ~ 26887206 (+)
G187672 NA non-coding downstream 56711 26887707 ~ 26888304 (+)
LOC120546586 dtnb other upstream 58631 26695430 ~ 26737803 (+)
G187574 NA other upstream 110927 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 344069 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 365037 26413691 ~ 26431397 (+)
gareml garem2 other upstream 513426 26265189 ~ 26283008 (+)
LOC120546215 LOC104930085 other downstream 197109 27028105 ~ 27038228 (+)
afdna afdn,LOC102779179 other downstream 1708404 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 2041690 28872686 ~ 28883121 (+)
G188063 NA other downstream 2055494 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 2279962 29110958 ~ 29132700 (+)

Expression


Co-expression Network