LOC120546602


Basic Information

Item Value
gene id LOC120546602
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18658909 ~ 18667719 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781658.1
ACCTAAacattaatctttttttttttttttttaaacacgttTCAGAAAGTGACACAATTCGCTCAGGGCTTCTTGCAGATACAGGGAGGCTGCCAGGATCTCGCGGTGTGATGATGGATCAGTGggaggagatcagtgaagaagaggaagaggaagagcagcAGCTATCTGATCAGTCAGTCCTGCCCACAGGAAGCCAGGATCAGCTGGAGGACGAGGAGAAGCCAACCCAGGCTCAAGAGGTCAACAGTGGTGATGAGTGGGACACTGATCTGGAAACAGACAATGCCACCAATGAGAAACAATGTTTGTCCTGTGCGGAGCTGTACCTGCAGGCCTGTTGGTGGACAGGGTCCGTTCCCGTATCCTCCTTCCGCCGTCACTTGGGTGAAGCCAGTCTCAACCTGAACCACTATGGTGTGGGACCTCTGGGGGCCAAAGCTCTGGCCATAGTCCTGCAAAATGACATTGTCGTCACCAACCTTGAGCTGGAGGACAACGGACTTGGGGCCGAGGGGGCGCGCTATATGGTGGAGATGCTTCAAACCAACATCAGCATCCAGAGTCTAAATCTTTCCAACAACCAGCTGCATCTTGAAGGAGCACACATCATCTCCAAAATGCTGTTAGACAATTACTACATCAAATCCCTCAAACTGTCAGGAAATGATTTTGATGATTCTGCTGTTAAATACTTTGCTGATGCTTTGAAGgGTGACTATGTGGTCAAAGAGCTGGACCTCAGTCACAACAGGTTCTGTAACACAGGAGGAGAACACCTGGGTCATATGTTAGCCACAAATGTAGGTATTGAAGTCCTAAATTTGAGCTGGAACCACCTTCGTATGGGTGGTGCAGTGGCTCTGAGTGCTGGGCTGAAGGTGAACTCGACTCTGAAGCAGCTCCAGCTGTCATGGAACGGTTTTGGCCACATCGAGGCAGAGTCACTGGGTCAAGCACTGAAACAAAACAGCACACTGGTGCTGCTGGACCTCAGCAGTAACAGTATAGACGACCAGGCTGCGACACTTCTCTGCCAGGGCCTGGCCGCCAACGACACCCTCAGGGTCCTCAAGCTCTCCCATAACCCCCTGACAAATATCGGCGCTCTGACGCTGCTCAAAACAATTaccaacaacatgaaatcagcCGTGGAGGAGATTGATATTTCTACAGTGTTTGTCTGCGAGGCCTTTGTGGAGCTGTTGGAAAAAGCCCGTCAGGGGCGTCCTGCTCTGGATGTTCGACACAGCGCCATGAGTTCTGTCACCAGGAACTCCTCCGCCCTCCAGATCTTTCAGAAATTCCTTGAAGAGCGAAATGAGAGCATCTTGGATTTCTTCCAAGCTTTGGATAAAGAAGGAACCACGAAGGTCTCCACCGCTGCCTTCAGGAAGGCTGTAAAGGCAGCTAACATACCTCTGGATCAGCGGCAGCTCGAGTGGTTGATCAGGATGTTTGACAAGAAATGCACAGCCACCATCATCTACAGGTTAGTCTGTGAACTGGTGTATGTAGGCTCATTATAATAGTTCTGTCATCCAATATTTACCTTGCAGACAAAAAGTACTTTTTTTCTGCTAGTCAAGAAGAAACTTAATCAGTAACTTTTTTCATGAAGTAACTTtttaagagaagaagaaaataaacaggTTTGTGGTGGAccaaaatgcttagttttaaaAGGGCCAGGTCATCcacttgaaaaataaaacacgcTTTCCCACTTACCTTTGTGGTGTACAACCATCAGATCATTTCAGATTTATTTGGTTTTGAAACCTGAATAAATCTTGCTCGGGTTAAGTGGGAAACATGTTTCTTGTTCATTGTTGACCTTGGAAAATAGtaattttacaagctttttctAGAGTAGAGTAGAGCCTCACGGTCTTCAGTGCATGGAGATTGCTCAGATGCAATGGACCGTGTAGTGTAGTTTGTCCTTCactcttaaaggtgcagtaggtaagacttataaaactaactttctgtcatattttctgaaact
>XM_039781659.1
ACCTAAacattaatctttttttttttttttttaaacacgttTCAGAAAGTGACACAATTCGCTCAGGGCTTCTTGCAGATACAGGGAGGCTGCCAGGATCTCGCGGTGTGATGATGGATCAGTGggaggagatcagtgaagaagaggaagaggaagagcagcAGCTATCTGATCAGTCAGTCCTGCCCACAGGAAGCCAGGATCAGCTGGAGGACGAGGAGAAGCCAACCCAGGCTCAAGAGGTCAACAGTGGTGATGAGTGGGACACTGATCTGGAAACAGACAATGCCACCAATGAGAAACAATGTTTGTCCTGTGCGGAGCTGTACCTGCAGGCCTGTTGGTGGACAGGGTCCGTTCCCGTATCCTCCTTCCGCCGTCACTTGGGTGAAGCCAGTCTCAACCTGAACCACTATGGTGTGGGACCTCTGGGGGCCAAAGCTCTGGCCATAGTCCTGCAAAATGACATTGTCGTCACCAACCTTGAGCTGGAGGACAACGGACTTGGGGCCGAGGGGGCGCGCTATATGGTGGAGATGCTTCAAACCAACATCAGCATCCAGAGTCTAAATCTTTCCAACAACCAGCTGCATCTTGAAGGAGCACACATCATCTCCAAAATGCTGTTAGACAATTACTACATCAAATCCCTCAAACTGTCAGGAAATGATTTTGATGATTCTGCTGTTAAATACTTTGCTGATGCTTTGAAGgGTGACTATGTGGTCAAAGAGCTGGACCTCAGTCACAACAGGTTCTGTAACACAGGAGGAGAACACCTGGGTCATATGTTAGCCACAAATGTAGGTATTGAAGTCCTAAATTTGAGCTGGAACCACCTTCGTATGGGTGGTGCAGTGGCTCTGAGTGCTGGGCTGAAGGTGAACTCGACTCTGAAGCAGCTCCAGCTGTCATGGAACGGTTTTGGCCACATCGAGGCAGAGTCACTGGGTCAAGCACTGAAACAAAACAGCACACTGGTGCTGCTGGACCTCAGCAGTAACAGTATAGACGACCAGGCTGCGACACTTCTCTGCCAGGGCCTGGCCGCCAACGACACCCTCAGGGTCCTCAAGCTCTCCCATAACCCCCTGACAAATATCGGCGCTCTGACGCTGCTCAAAACAATTaccaacaacatgaaatcagcCGTGGAGGAGATTGATATTTCTACAGTGTTTGTCTGCGAGGCCTTTGTGGAGCTGTTGGAAAAAGCCCGTCAGGGGCGTCCTGCTCTGGATGTTCGACACAGCGCCATGAGTTCTGTCACCAGGAACTCCTCCGCCCTCCAGATCTTTCAGAAATTCCTTGAAGAGCGAAATGAGAGCATCTTGGATTTCTTCCAAGCTTTGGATAAAGAAGGAACCACGAAGGTCTCCACCGCTGCCTTCAGGAAGGCTGTAAAGGCAGCTAACATACCTCTGGATCAGCGGCAGCTCGAGTGGTTGATCAGGATGTTTGACAAGAAATGCACAGCCACCATCATCTACAGTCAGTTTGCTGAGCTGTCATAGATACAGAGACGTACAGCACCACCAAGATGAGGATTAGGGATAACAGAGGACACATCTTCAAATAAAAGTTAATGGAGTCTGTTATTTGATTTTGTTCTTTATATGCTACAAATGGGACTTTGGATATTCAGAAGGGACTCCATTTTTTTGCCATACAAATCTCACAATTTCACATTTTTgcaaaatatactgtagatacttACAGTATAAGGAGGTGGAACTGACATCACAAACCCAATAGTAATGTGCACCACTGACGGTTGTATCCTAATAACTCCCCCTTCCACAGTAGTCCTTAGCTCAACCCAATTCTGTCCAGTGTGAATACTTGAACCTCTGACACCAACCAGCTGCACCCACCTGAGCGCTGCCAGCTGTGTGTGCGCCTGGGCCACAGGGTCCTCTGCCTCATTCTCTCCATCCAAAAATAATCTTCTGGTATGACAACAGAACAAGAgcaggaagaaaaagagagctGGCGTCCATATCAAAGGAccgagaggagagaaagaatagGGCCAGATGCAAGCTAGTTGTTTCGCCACATTGGTTAGCTTTGAATGAAATAGCCTGTAAAGGAAACAGCACGCTTATGAATATGCATGTAAAGCATTACTTATGCAGACCCTGCAGGGTAGGATTATTAAGGGTGAATTGTCTCAAGGTGTGATATCCAACAGTGCAATCTGTTTCTGTCTGGTGGCTCCAGTGGTAACCACAGAGAAGACAATGACAGGACGCACCGTCTTTACTGAGTCATGTGTAAACGGCTTGACACCTAATATCGTGGGTCATGAggacatatataaatatatatcttGTTGCTTCTTTCACCTACTTTGTCGTCGTCGTCGCTTTCCCCTCCTGATCCTCCAGACACTCTTCTTCTTCAACATGGTGGTTGACTTCCATGTCAGCTCCAGCGGGATTGGCATCATCAAAGCCAATGACGTCAATATCACTTTCTGAGGAGATGTGGTAGCCGTCAGAGTTGCAAACTCCTCCAagtctcctcttcttcttcattgTCATCATCTTCCTCTATGGAGCTTCTCCTGGATCCTCCAGACAGTGCATTCGGTTCCTTCACATCATTTAAAATATGTCTGGTATAGATGGCAAGGGGTTGCCTGAGATCCCAAGATCCAGGCCCTACAAGATTCATTCAGACAACTGCCACCATTACCATTCATATAAGCAAACTGGAAATCTATCCTTCCAGTTTACCTTCAAAAGCTTTTTGTAAAGacacatctttttttgttaaat
>XM_039781660.1
ACCTAAacattaatctttttttttttttttttaaacacgttTCAGAAAGTGACACAATTCGCTCAGGGCTTCTTGCAGATACAGGGAGGCTGCCAGGATCTCGCGGTGTGATGATGGATCAGTGggaggagatcagtgaagaagaggaagaggaagagcagcAGCTATCTGATCAGTCAGTCCTGCCCACAGGAAGCCAGGATCAGCTGGAGGACGAGGAGAAGCCAACCCAGGCTCAAGAGGTCAACAGTGGTGATGAGTGGGACACTGATCTGGAAACAGACAATGCCACCAATGAGAAACAATGTTTGTCCTGTGCGGAGCTGTACCTGCAGGCCTGTTGGTGGACAGGGTCCGTTCCCGTATCCTCCTTCCGCCGTCACTTGGGTGAAGCCAGTCTCAACCTGAACCACTATGGTGTGGGACCTCTGGGGGCCAAAGCTCTGGCCATAGTCCTGCAAAATGACATTGTCGTCACCAACCTTGAGCTGGAGGACAACGGACTTGGGGCCGAGGGGGCGCGCTATATGGTGGAGATGCTTCAAACCAACATCAGCATCCAGAGTCTAAATCTTTCCAACAACCAGCTGCATCTTGAAGGAGCACACATCATCTCCAAAATGCTGTTAGACAATTACTACATCAAATCCCTCAAACTGTCAGCCACAAATGTAGGTATTGAAGTCCTAAATTTGAGCTGGAACCACCTTCGTATGGGTGGTGCAGTGGCTCTGAGTGCTGGGCTGAAGGTGAACTCGACTCTGAAGCAGCTCCAGCTGTCATGGAACGGTTTTGGCCACATCGAGGCAGAGTCACTGGGTCAAGCACTGAAACAAAACAGCACACTGGTGCTGCTGGACCTCAGCAGTAACAGTATAGACGACCAGGCTGCGACACTTCTCTGCCAGGGCCTGGCCGCCAACGACACCCTCAGGGTCCTCAAGCTCTCCCATAACCCCCTGACAAATATCGGCGCTCTGACGCTGCTCAAAACAATTaccaacaacatgaaatcagcCGTGGAGGAGATTGATATTTCTACAGTGTTTGTCTGCGAGGCCTTTGTGGAGCTGTTGGAAAAAGCCCGTCAGGGGCGTCCTGCTCTGGATGTTCGACACAGCGCCATGAGTTCTGTCACCAGGAACTCCTCCGCCCTCCAGATCTTTCAGAAATTCCTTGAAGAGCGAAATGAGAGCATCTTGGATTTCTTCCAAGCTTTGGATAAAGAAGGAACCACGAAGGTCTCCACCGCTGCCTTCAGGAAGGCTGTAAAGGCAGCTAACATACCTCTGGATCAGCGGCAGCTCGAGTGGTTGATCAGGATGTTTGACAAGAAATGCACAGCCACCATCATCTACAGGTTAGTCTGTGAACTGGTGTATGTAGGCTCATTATAATAGTTCTGTCATCCAATATTTACCTTGCAGACAAAAAGTACTTTTTTTCTGCTAGTCAAGAAGAAACTTAATCAGTAACTTTTTTCATGAAGTAACTTtttaagagaagaagaaaataaacaggTTTGTGGTGGAccaaaatgcttagttttaaaAGGGCCAGGTCATCcacttgaaaaataaaacacgcTTTCCCACTTACCTTTGTGGTGTACAACCATCAGATCATTTCAGATTTATTTGGTTTTGAAACCTGAATAAATCTTGCTCGGGTTAAGTGGGAAACATGTTTCTTGTTCATTGTTGACCTTGGAAAATAGtaattttacaagctttttctAGAGTAGAGTAGAGCCTCACGGTCTTCAGTGCATGGAGATTGCTCAGATGCAATGGACCGTGTAGTGTAGTTTGTCCTTCactcttaaaggtgcagtaggtaagacttataaaactaactttctgtcatattttctgaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781658.1 False 2011 mRNA 0.47 13 18660548 18667719
XM_039781659.1 True 2783 mRNA 0.47 14 18658909 18667719
XM_039781660.1 False 1879 mRNA 0.47 11 18660548 18667719

Neighbor

gene id symbol gene type direction distance location
ptk2bb ptk2b coding downstream 344442 18293837 ~ 18314467 (-)
baalcb LOC103363522,LOC102076438,LOC102297435,LOC101471426 coding downstream 454964 18198485 ~ 18203945 (-)
eif2b4 eif2b4 coding downstream 476294 18177413 ~ 18182615 (-)
snx17 snx17 coding downstream 486417 18141723 ~ 18172492 (-)
si:ch211-278j3.3 LOC100692210,LOC102294113,LOC101474259,LOC103355636 coding downstream 533337 18102262 ~ 18125572 (-)
LOC120546605 LOC103372633,LOC101488065,LOC104964430 coding upstream 1242 18668961 ~ 18680534 (-)
LOC120546603 LOC104951063,LOC103372632 coding upstream 20088 18687807 ~ 18690956 (-)
LOC120546718 daam1 coding upstream 151362 18819081 ~ 18869609 (-)
LOC120546626 ppp1r13b coding upstream 206015 18873734 ~ 18898311 (-)
LOC120546204 NA coding upstream 240938 18908657 ~ 18913081 (-)
G185454 NA non-coding downstream 22247 18636384 ~ 18636662 (-)
G185376 NA non-coding downstream 261739 18396888 ~ 18397170 (-)
G185368 NA non-coding downstream 340198 18318396 ~ 18318711 (-)
LOC120546287 NA non-coding downstream 472322 18183960 ~ 18186587 (-)
G185320 znf513,LOC102795572 non-coding downstream 518702 18137725 ~ 18140207 (-)
G185467 NA non-coding upstream 26835 18694554 ~ 18694796 (-)
G185438 LOC104951064,LOC103372631,LOC100709203 non-coding upstream 27962 18695681 ~ 18698228 (-)
G185479 NA non-coding upstream 59153 18726872 ~ 18732810 (-)
G185556 NA non-coding upstream 246094 18913813 ~ 18914471 (-)
G185565 NA non-coding upstream 260606 18928325 ~ 18977441 (-)
LOC120546357 LOC106525279 other downstream 11508 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 152711 18489815 ~ 18506198 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 745873 17911270 ~ 17913036 (-)
zgc:153284 NA other downstream 891999 17764805 ~ 17766910 (-)
tbpl1 tbpl1 other downstream 1027558 17623124 ~ 17631351 (-)
abcd4 abcd4 other upstream 110411 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 236818 18904537 ~ 18907254 (-)
LOC120546238 efr3b,LOC101073163 other upstream 666336 19334055 ~ 19354316 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other upstream 980808 19648527 ~ 19652927 (-)
ccdc167 ccdc167 other upstream 1179239 19846958 ~ 19849804 (-)

Expression


Co-expression Network