LOC120546603 (LOC104951063,LOC103372632)


Basic Information

Item Value
gene id LOC120546603
gene name LOC104951063,LOC103372632
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18687807 ~ 18690956 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781661.1
tttCAGCTCACTATAAAAGGCGGGCCTCTCTACTATCTGCACAGTGCCATTTATGAACCCGGCAAATGGAATTATAAGTAAGGGGTTTAGAAGTCAGTTTTCTACTTAGATTAGATAGACTGTTCTATATTTTTATGCAgtgattttagacgagaggaaCATGCATCCAGACTCCAGCACTGAATTCGACTCATCGTCCAGCTGTAGCACAGCATCGCCTGGCGGGGACACCCCTGGGTGCAGCCAGCATCCTCCTGACTCGCTTTCATCATCAGTGGACAGCGCCAAGGATACTGAGATCAGTGCAGCAGACTCCTTTGTTCCGACCGTGACTGCAATCTCAACCTCGCCGGATCTAAGGTGGATGGTGCAGCCGACAGTCATCACATCTGTCTCCCCGTCGTCCCGCCGTGCAAAAACCAAAACTCAGTCGTCTTCCGCGGCAAACAAGGCAAAGCCCTCCAACAGGAAAGGACTGAAAGAAAAGGCTtccaaagaggaggaagaaaggaggaggatcaggagagagaggaacaaGATTGCTGCAGCAAAGTGTCGTAACAGACGAAGGGAGCTGATAGACACTCTGCAAGCTGAAACTGACAAGCTTGAAGATGAGAAGTCTGCGCTCCAGACAGAGATAGCCGACCTGctgagggagaagaagagacTGGAACAGGTCTTAGTCTCCCACAAACCATCCTGCAAACTTCCTGTAAAtgacaatgatgatgatgataatgatgaggaggaggataataatgaagatgatgatgttAACACAATGCTGCAAGATCCTCCGGCCTCCCCACAGCTGCTGTCTATGTTAGAGAATGGAAAACATCCAGAGAGCAACACATCCATCGGAGAAGCCTCTATTGGTCAAGACATGGACACTGTCCCTTGCATCCCTGCTGCAGCCATTTTGGGGAACTCCAACATCCTCCTGTGTTCGAGTGCAGAAGAGGAGGATCTGGAGGACTTGAAAGGAGATGACCTGGATGACTTGGTGCCCAGCCTGGAGATGGCAGTGAGTCCAGAGATGGCTGCATCCGTCCCTGACATAGACCTGAGCAGCCCCTTTTGCCTCTCAGACTGGGAAACCCTGTACAAGTCAGTGGCCAACGACCTTGAATCTTTGAGCACGCCAGTCATGTCTTCCAGTCCAACTTGTAGCAATTACCGCACAGTGTTTTCCTTTAATTACTCTGAGATTGATTCCTTGGATGAGGGCTTTGAGAGCCTCAAAGGCAGCCTTGGTGCATCTGAGTTAATGAAAGATCTTAACTCTCCAACACTTCTGGCCTTGTGAATGCAAAGAAGTTATGCAATGATACTGTAATTGTATTTTAACCAGCCAGCAAGCTATGATCTCTCtcttaaaaacaatgttttgtaGTGTGAGTTTTGATGTTGTGTGAATCTAAACATCAAAGGTTGTGTACATGACATGTTTTCTGTGACTGTAACTGGGTTGACTTATTTCATACTGCTGGTGCGATTCTCTGAGGTGAGACAAAAATGCATGCAAATACAAGTCATCCGTAATCCAAGAAGAGGTGGTATctagtgtttttaaatgtcatgtgAAGTTAGATCATGCTCAATagcataatgtgtgtgtaatactgtTGACAAAGTTGTATTGTAACAAGTGAAAATAGCAGGGTTACTAATGTGTAGTGTATAGGTGTCACATCTTGCTGTAAGGTGTCCCCTAACATGACATTTCCTTTCAAGTTTTtccataataaaaaaagatcacGTCATGTATTTTATCAAGATGTATTTTATGacatagtttatttttttacttatcaAAAATGATCAGATGCAAAGATTGTATAACGCTGGAAATAAAATAAGACAACCACAAACGA

Function

NR:

description
PREDICTED: proto-oncogene c-Fos-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781661.1 True 1880 mRNA 0.44 4 18687807 18690956

Neighbor

gene id symbol gene type direction distance location
LOC120546605 LOC103372633,LOC101488065,LOC104964430 coding downstream 7273 18668961 ~ 18680534 (-)
LOC120546602 NA coding downstream 20088 18658909 ~ 18667719 (-)
ptk2bb ptk2b coding downstream 373340 18293837 ~ 18314467 (-)
baalcb LOC103363522,LOC102076438,LOC102297435,LOC101471426 coding downstream 483862 18198485 ~ 18203945 (-)
eif2b4 eif2b4 coding downstream 505192 18177413 ~ 18182615 (-)
LOC120546718 daam1 coding upstream 128125 18819081 ~ 18869609 (-)
LOC120546626 ppp1r13b coding upstream 182778 18873734 ~ 18898311 (-)
LOC120546204 NA coding upstream 217701 18908657 ~ 18913081 (-)
LOC120547084 LOC103364980,LOC104947346 coding upstream 223911 18914867 ~ 18932089 (-)
LOC120546312 NA coding upstream 266505 18957461 ~ 18962093 (-)
G185454 NA non-coding downstream 51145 18636384 ~ 18636662 (-)
G185376 NA non-coding downstream 290637 18396888 ~ 18397170 (-)
G185368 NA non-coding downstream 369096 18318396 ~ 18318711 (-)
LOC120546287 NA non-coding downstream 501220 18183960 ~ 18186587 (-)
G185320 znf513,LOC102795572 non-coding downstream 547600 18137725 ~ 18140207 (-)
G185467 NA non-coding upstream 3598 18694554 ~ 18694796 (-)
G185438 LOC104951064,LOC103372631,LOC100709203 non-coding upstream 4725 18695681 ~ 18698228 (-)
G185479 NA non-coding upstream 35916 18726872 ~ 18732810 (-)
G185556 NA non-coding upstream 222857 18913813 ~ 18914471 (-)
G185565 NA non-coding upstream 237369 18928325 ~ 18977441 (-)
LOC120546357 LOC106525279 other downstream 40406 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 181609 18489815 ~ 18506198 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 774771 17911270 ~ 17913036 (-)
zgc:153284 NA other downstream 920897 17764805 ~ 17766910 (-)
tbpl1 tbpl1 other downstream 1056456 17623124 ~ 17631351 (-)
abcd4 abcd4 other upstream 87174 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 213581 18904537 ~ 18907254 (-)
LOC120546238 efr3b,LOC101073163 other upstream 643099 19334055 ~ 19354316 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other upstream 957571 19648527 ~ 19652927 (-)
ccdc167 ccdc167 other upstream 1156002 19846958 ~ 19849804 (-)

Expression


Co-expression Network