znf410 (znf410,LOC102793462)


Basic Information

Item Value
gene id znf410
gene name znf410,LOC102793462
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14548038 ~ 14560460 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781695.1
AGCTAACTCCAGTAGATGGCAGTAATGCAACACTAAGGATGCCAGCATACCGTTCGTattcaaagaagaagaagatgaataGTACTCTCACTCTTTAGCTTAGATACACAACTAAAACAAGATTGTGCGATGGTTTTGACACAAAGACGACCTGCACCCACCCCGTATGACCGACACAGAATCCAACATTTAGCAGGTGAAATTTGAGGTTCCACACAGGGTGACCCATGCTTTCTGATGAGCTTGACTCCAAACCAGAGCTGCTGGTGCAGTTTGTGCAAAACGCGTCCATCCCGTTGGTGCAGGGTCTGGAGGACTCGGAGTCCAAACACCCCTGCCTGCCCCTGCCCCTGCCCCTGCCTCTGCCTCTGCCCCTGCCTCTGCTGTCTCCAGCTGAGAGCTCGCTGTGCAGCCCACTGGAGCTCACAGGAGGAGGCCTGAGCCATGAGCCTGAGACTGCTCCCTCCCTATCCGAGTTCGAAGGTGTGTCCGAGCGAGGCCCGTTAGTGGTCCAGACACACTCTCATCCACGGGCCTCACCCAGCCCCCCACCCATCCTCCATGACCTCCAACAGTCAGACAGCACTTCCTACGTACTACTGAACCTTGCCAAAGGCATCACAGCCTCCTCAGAGTCCCTGATCTTCGCCGCAGATGGCGCCGGGGAGGATGACGATGAGGGGGTCTCATCGGGGGACTATGGGATCGATGGCAGTGCTCCCTGGTATCTGCGGGTACAGGAGCTGGCACACGACAGCCTGATTGCCGCCACGCGGGCACAGCTTGCCAGAGATGCCAAGGCCAGCCAGGACGCCAGAGCTGCAAGCGTCAGTAACGgtgaccacacacacagtttgacaGCAGACAGGGACAAGCCAGAGCTGGCGTCTCGGACCAGCCGCCCCCTCTCCAAGCAGATCCTCCGCTGCTCGTTTGAGGGCTGCTGCAGGACGTTCACCTGGCCGGCTCATCTCAAATACCACCTCAAAACACACAgGAATGACCGAATGTTCCGGTGCGGCGCAGAGGGCTGCGGGAAGAGTTTCTACGTGCTGCAGAGGCTGCAGGttcacatgagaactcacaacGGCGAGAAGCCCTTCATCTGCAAGGAGAAGAACTGTGGCAAGAAGTTCACCACAGCTGGAAACCTGAAGAACCACAGACGCATACACACAGGAGAGAAGCCTTTTCTGTGCGAAGCAGATGGCTGTGGCCGATCCTTTGCAGAGTATTCCAGTCTACGAAAACACATGCTCGTACATTCTGGTGAGAAGCCTCATCACTGTGGGATCTGTGGGAAGACCTTCTCTCAGTCCGGCAGCAGAAACGTCCACATGAGGAAGAGACACGGAGAGGACGGGCTCAGCAGTGAAAGCAGAGAAACAGGCTGGTCTTTTGTAAAAGCAGAGCAAAGGAAGATGCTGCTTCACAACAGAGGGGTACTTTCTGAGTTACTGGATGAATTATTGAATCGACTGTGTTGGAATAACTACAGTcctggaaaaacaacaacaaaaatatttccaCACAAGCGTCAAAGGAGAGGCTCTGACACAAAGCAGCCTGCTGGAGGCAGACGGCGAAAATGGAGATGGTATGGTCACCATGACAACAACTGTTGAACCCATGAATCTTCACCATGCCATGCTGAGATCACCAGGCTCTGCCGACTCAGTGGTTGTTCTCTCTCAGCCACATGAACTGGTGACCATGACGACAGAAGACCATGCATATGGAGAAGATGTGGTGGCGCTGCTGTAGTCTGCCATTATGAAAAATGTCACACACTGCCTATTTCAGCAGCGCTAGACTAACCGTCACATTGGACGTAGACATCTCATTTGTAAATAGATGAACTGCTGACTCTCACCCCTGTAGATATTTGTAATTAGTAACCGATgatggttttattttgacaagTGTCAAATGGCAAAGTTTGTACAAACgaccttttttttcctctagtTTTTGAAAACAATTACTCCCAAAGAAATACTGAGACGGGTTCAAAGTTTATGAAAATATAATGTCCATGTGTTTTGTGCATTAACATTATAAACAGCAGTCTGGGGTTGAAATGCAGTGATGATATTCTCTAACAGAAAATGAATGccacttatttttttataacttcAATGGCTGATATGATTGActgtcacattttaaatataccAGACATGTGTACACCCCCATTATTACTAACTACCAAACACTTGATACTAGAAACTACCGGAGCACAGTATATCACATTGCTGCATGTAAACACTGGTCACAGCACAACCAGCTTAACAagccaaaacacaaaaacatctaTCTCAAACTAATTGTGTATCCAGTAATGGCCCAAAGCTGCATTAACTGAGTGTTATGTGTAACAGCTTTCACTCTAATGTCAACCTCCAGTGCTTGATTTGTTCTCTGAGTAGGAAAGCTGTTGCTCATTTACAGCTCGATACATCACCACTTGAGAATAATTGCTTCATGAGAAATTAAGAATTGCTCATGAGGTTAGCTCCTTCCTTATGAAACACTGCAGATGTCTGGGGCCGTTAGATAAGGTAGTGCACGACGTTACCCGTGTTGGTTATTGAGCACCACCTAAATCAGCAGTGGCTGTTCCTCCCTTCTCAGTGGATCTTCAGGTTGTGAAAGTGGTCCAACGTGGCGCCCAATGCCCAGCTTGCCTCCACGTTGTTCACTTTCTTGGTCAActaggagggaaaaaaacaacaccaaatCACTCAAATGCCTTTTatatttattgaaataaaaagattaacagtttttgtgtagAATCTTTCCTTTAGCATGAATTGTGCTCCTATTTTAGATCTGGGGCATCACTTCTTTATGTGATTATGTCAAAGGGTGtactagaataaaaaaaaaatatatatca
>XM_039781696.1
AGCTAACTCCAGTAGATGGCAGTAATGCAACACTAAGGATGCCAGCATACCGTTCGTattcaaagaagaagaagatgaataGTACTCTCACTCTTTAGCTTAGATACACAACTAAAACAAGATTGTGCGATGGTTTTGACACAAAGACGACCTGCACCCACCCCGTATGACCGACACAGAATCCAACATTTAGCAGGTGAAATTTGAGGTTCCACACAGGGTGACCCATGCTTTCTGATGAGCTTGACTCCAAACCAGAGCTGCTGGTGCAGTTTGTGCAAAACGCGTCCATCCCGTTGGTGCAGGGTCTGGAGGACTCGGAGTCCAAACACCCCTGCCTGCCCCTGCCCCTGCCCCTGCCTCTGCCTCTGCCCCTGCCTCTGCTGTCTCCAGCTGAGAGCTCGCTGTGCAGCCCACTGGAGCTCACAGGAGGAGGCCTGAGCCATGAGCCTGAGACTGCTCCCTCCCTATCCGAGTTCGAAGGTGTGTCCGAGCGAGGCCCGTTAGTGGTCCAGACACACTCTCATCCACGGGCCTCACCCAGCCCCCCACCCATCCTCCATGACCTCCAACAGTCAGACAGCACTTCCTACGTACTACTGAACCTTGCCAAAGGCATCACAGCCTCCTCAGAGTCCCTGATCTTCGCCGCAGATGGCGCCGGGGAGGATGACGATGAGGGGGTCTCATCGGGGGACTATGGGATCGATGGCAGTGCTCCCTGGTATCTGCGGGTACAGGAGCTGGCACACGACAGCCTGATTGCCGCCACGCGGGCACAGCTTGCCAGAGATGCCAAGGCCAGCCAGGACGCCAGAGCTGCAAGCGTCAGTAACGgtgaccacacacacagtttgacaGCAGACAGGGACAAGCCAGAGCTGGCGTCTCGGACCAGCCGCCCCCTCTCCAAGCAGATCCTCCGCTGCTCGTTTGAGGGCTGCTGCAGGACGTTCACCTGGCCGGCTCATCTCAAATACCACCTCAAAACACACAgGAATGACCGAATGTTCCGGTGCGGCGCAGAGGGCTGCGGGAAGAGTTTCTACGTGCTGCAGAGGCTGCAGGttcacatgagaactcacaacGGCGAGAAGCCCTTCATCTGCAAGGAGAAGAACTGTGGCAAGAAGTTCACCACAGCTGGAAACCTGAAGAACCACAGACGCATACACACAGGAGAGAAGCCTTTTCTGTGCGAAGCAGATGGCTGTGGCCGATCCTTTGCAGAGTATTCCAGTCTACGAAAACACATGCTCGTACATTCTGGTGAGAAGCCTCATCACTGTGGGATCTGTGGGAAGACCTTCTCTCAGTCCGGCAGCAGAAACGTCCACATGAGGAAGAGACACGGAGAGGACGGGCTCAGCAGTGAAAGCAGAGAAACAGGAGAGGCTCTGACACAAAGCAGCCTGCTGGAGGCAGACGGCGAAAATGGAGATGGTATGGTCACCATGACAACAACTGTTGAACCCATGAATCTTCACCATGCCATGCTGAGATCACCAGGCTCTGCCGACTCAGTGGTTGTTCTCTCTCAGCCACATGAACTGGTGACCATGACGACAGAAGACCATGCATATGGAGAAGATGTGGTGGCGCTGCTGTAGTCTGCCATTATGAAAAATGTCACACACTGCCTATTTCAGCAGCGCTAGACTAACCGTCACATTGGACGTAGACATCTCATTTGTAAATAGATGAACTGCTGACTCTCACCCCTGTAGATATTTGTAATTAGTAACCGATgatggttttattttgacaagTGTCAAATGGCAAAGTTTGTACAAACgaccttttttttcctctagtTTTTGAAAACAATTACTCCCAAAGAAATACTGAGACGGGTTCAAAGTTTATGAAAATATAATGTCCATGTGTTTTGTGCATTAACATTATAAACAGCAGTCTGGGGTTGAAATGCAGTGATGATATTCTCTAACAGAAAATGAATGccacttatttttttataacttcAATGGCTGATATGATTGActgtcacattttaaatataccAGACATGTGTACACCCCCATTATTACTAACTACCAAACACTTGATACTAGAAACTACCGGAGCACAGTATATCACATTGCTGCATGTAAACACTGGTCACAGCACAACCAGCTTAACAagccaaaacacaaaaacatctaTCTCAAACTAATTGTGTATCCAGTAATGGCCCAAAGCTGCATTAACTGAGTGTTATGTGTAACAGCTTTCACTCTAATGTCAACCTCCAGTGCTTGATTTGTTCTCTGAGTAGGAAAGCTGTTGCTCATTTACAGCTCGATACATCACCACTTGAGAATAATTGCTTCATGAGAAATTAAGAATTGCTCATGAGGTTAGCTCCTTCCTTATGAAACACTGCAGATGTCTGGGGCCGTTAGATAAGGTAGTGCACGACGTTACCCGTGTTGGTTATTGAGCACCACCTAAATCAGCAGTGGCTGTTCCTCCCTTCTCAGTGGATCTTCAGGTTGTGAAAGTGGTCCAACGTGGCGCCCAATGCCCAGCTTGCCTCCACGTTGTTCACTTTCTTGGTCAActaggagggaaaaaaacaacaccaaatCACTCAAATGCCTTTTatatttattgaaataaaaagattaacagtttttgtgtagAATCTTTCCTTTAGCATGAATTGTGCTCCTATTTTAGATCTGGGGCATCACTTCTTTATGTGATTATGTCAAAGGGTGtactagaataaaaaaaaaatatatatca

Function

symbol description
znf410 Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF410 (zinc finger protein 410).

NR:

description
zinc finger protein 410-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781695.1 True 2902 mRNA 0.48 13 14548038 14560460
XM_039781696.1 False 2748 mRNA 0.48 12 14548038 14560460

Neighbor

gene id symbol gene type direction distance location
LOC120547074 samd15,LOC102792272,LOC106518567 coding downstream 18685 14525235 ~ 14529353 (-)
lrfn5b LOC104919828,LOC103359906,LOC102792771 coding downstream 23867 14509448 ~ 14524171 (-)
LOC120546407 NA coding downstream 159595 14387520 ~ 14388443 (-)
LOC120546406 NA coding downstream 166861 14380014 ~ 14381177 (-)
magl NA coding downstream 169483 14360513 ~ 14378555 (-)
cipcb cipc,LOC101061969 coding upstream 947 14561407 ~ 14566531 (-)
actr10 actr10 coding upstream 23570 14584030 ~ 14592235 (-)
arf6a arf6.2,arf6,arf6a,LOC106518576,LOC104956700,LOC101063995,LOC106608083,LOC105893149 coding upstream 117080 14677540 ~ 14680093 (-)
fkbp3 fkbp3 coding upstream 143007 14703467 ~ 14706436 (-)
LOC120546409 mdga2 coding upstream 231653 14792113 ~ 14929662 (-)
G184306 NA non-coding downstream 54470 14491099 ~ 14493568 (-)
G184295 NA non-coding downstream 109083 14432231 ~ 14438955 (-)
G184293 NA non-coding downstream 115866 14427804 ~ 14432172 (-)
G184292 NA non-coding downstream 123191 14423153 ~ 14424847 (-)
G184291 LOC103359912,LOC104959468 non-coding downstream 130790 14416872 ~ 14417248 (-)
G184346 NA non-coding upstream 95197 14655657 ~ 14656247 (-)
G184356 NA non-coding upstream 111434 14671894 ~ 14677060 (-)
G184360 NA non-coding upstream 128846 14689306 ~ 14689940 (-)
G184354 NA non-coding upstream 139224 14699684 ~ 14702181 (-)
G184381 NA non-coding upstream 480849 15041309 ~ 15041536 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 49668 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 1056895 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 1079973 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 1244254 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 1332138 13145464 ~ 13215900 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 10920 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 96717 14657177 ~ 14667601 (-)
rps29 NA other upstream 549780 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1228366 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 1505394 16065854 ~ 16068309 (-)

Expression


Co-expression Network