LOC120546641


Basic Information

Item Value
gene id LOC120546641
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36232950 ~ 36257742 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781738.1
GGAggactctgtgtctctgcagacGCTCCATTAAGACTCTTCTCCCTGATGGCAGAAGTTCATATTCAGGGCAGAGAGGCTGCAGTGAACAACAAAAGATGGCGAAATCGGACCTCTTTAGAACTTTAGACAATTTGGGAGCCAAAGACTTTAAACGCTTCAAGTGGCTCCTGCAGCAGAAGGGGGTCCTAGAAGACTTCCCAGCAATCCCAAAGAGTCGACTGGAGAATGCAGACCGGATGGACACAGTGACTCAGATGTTCCAGACCTACAGTATAAACACTTTTAAAGTGACCAGGATAGTTTTAGTTGAGATGAATCAGAAAAATCTAGTTCTAGATCTGGAGAAGTTATCAAAGACCACCACAGAACCTGCAGAGATTATTGCTGCATGCCAGCAAAAAGTAAAATCCAACTCACAAACAAAGTTCCGTTGGGCATTTGAGGAGATTGCCAAAGCAGAAAACAAaacccttctgaatcagatgtACACAGAGATCTACTTCACAAAGGGATGGACTGCAGAGGTCCatgatgaacatgaggtcagacagattgaaataGCATCCTGGAAACCAGACAgaacagaaacaacaatcagacatgaagacatctttaaaaccccacctggaagagatgaaccaatcagaacagtgctGACAAtgggagtggctggcatcgggaaaacagtcttaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccagttcacatttccattcactttcagagagctgaatgtgctgaaagaggaaaaatacagcttggtggaacttgttcatcacttctttagtgaaaccaaagaagcaggaatctacaggtttgaagagttcccggttgtcttcatctttgacggtctggatcagtgtcgacttcctctggacttccttAACACTAAAATCttgactgatgttacagagtccacctcagtgggtgtGCTCCTGACTAACCTTATCAGGGGGAATCTGCTTCtctctgctcgcctctggataactacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcaccgatccacagaaggaggagtacttcaggaagagattcacagatgaggagcaggccagcAAAATCATCTCCCACATTAAGATATCGAGAAGCCTCCACGTCATGtgtcacatcccagtcttctgctgggtcactgctacagttctggaagacgtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacattcTCTTCTTGGTGGTTCAGACCAAACAGAAGAACGTCAAGTctgatggaggagctgagacagATTCACTCTGGAGTCCAGAGAGCGGTACAATGATCAAGTCTTTGGGgaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagaaCTGAGAGAGTGTGGCATTGATATCACAGTAGCCTCAGTGctcacacagatctttaaagaggaaaGTGGGCTGTACCAGGACAAGGGGTTCAGCTTTGTCCATCgtagtgttcaggagtttctggctgctcttcatgtccatttGACCTTCACCAACTCTGGAGTCAATCTGCTGTCAAAAGCAAAACCCGTGGATgaaacaactaaaaaaagatCTACACTGACATATCtctaccagagtgctgtggacaaggccttGAGGAGTtcaaatggacacctggacttgtttctctgcttcctcctgggtctttcactgcagaccaatcagacTCACCTACGAGGACTGttgacacagacagaaagtagCTCAGAGACCAATCAAGAAACAGTTgagtacatcaagaagaagatcagGAAGAGCTCCTCTGCAAAGAGAaacatcaatctgttccactgtctgaatgaactgagtGATTGTTCTCTAGTAGAGGAGATCCAACAGTACCTGAGCTCAGGAAGTCTCTCCAGAtataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaatacggCGCTTCAGAAGAGGCTCTTCtcaggctgctgccagtggtcaaagcctccaacaaagctctACTGATTGGCTGTATGCTCTCAgtgagaagctgtgaagctctgtcttcatttctcagttcccagtcctctagtctgagagagctggacctgacttacaacaacctgcaggactcAGGGGTGAATATGCTCTCTGCTGGACTTCAGAGTCCACACTGTACACTGAGAACCCTCAGGCTAAGAAAGTGTAGGCTGTCAGAGaaaagctgtgaagctctgtcttcagttctcagctctgagtcctctagtctgagagagctggacctgagttaCAACAGCctgaaggattcaggagtgaagaagCTCTCTGCTGGACTTCAGAGTCCACACTGTAAAATGGAAACCCTCAGGCTGGAAAAGTGTaagctgtcagagagaagctgtgaagctctgacctcagttctcagctctgggtcctctagtctgagagagctggacctgagttacaacaacctgcaggattcaggagtgaagctgctttCTGCTGGACTTCAGAGTCCACACTGTAAATTGGAAACCCACAGgctgagtgaatgtaagctctcagagagaagctgtgaagctctgtcttcAGTTCTCAGTTCTGAGTcatctagtctgagagagctggacctcagttacaacaacctgaaggattcaggagtgaagctgctttCTGCTGGACTTCAGAGTCCACAATGTACACTAGAAACTCTCAGTTTGGTAGGCTGTGAGATCACAGAGGAAGGCTGTACTTATCTGGCTTCAGCTCTGaactccaacccctcccatctgagagagctggacctgagcctCAATTATGTAGGAGACTCAGCAGTGAAGCTTCTGTCTGCTGCAGTGGAGAATCCACTCTGGAGACTAGAAACTCTCAGGTTCGAACATATATTGGAGCAGGGGTTAAGATATCTTCTGTTATGTTGAAGTATCCTTGTGAACTCacagtggacacaaacacagtgaccAGAAACCTTAAACTGTCTGAAAACAACAGGAAGGGGACACATATGGAGGAGAAGCAGCCATATCTTTATAATCCAGAGATGTTTGACTGCAggcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagGGGAGTGGAGAGGTTTATATAGCAGTGAGTTACAGAAGAATAAGCAGGAGGGGAAACAGTGAAGACTgtttgtttggatataatgatcagtcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781738.1 True 3356 mRNA 0.47 12 36232950 36257742

Neighbor

gene id symbol gene type direction distance location
LOC120546647 LOC100696183,LOC102786976 coding upstream 376919 35843762 ~ 35856031 (+)
ccr6a NA coding upstream 829681 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 887020 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 1039685 35187916 ~ 35193265 (+)
allc allc coding upstream 1291619 34928418 ~ 34941331 (+)
LOC120546639 NA coding downstream 11546 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 72403 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 408339 36666081 ~ 36681833 (+)
LOC120546644 NA coding downstream 467608 36725350 ~ 36746137 (+)
LOC120546642 NA coding downstream 500142 36757884 ~ 36774048 (+)
G189859 NA non-coding upstream 34735 36193496 ~ 36198215 (+)
G189879 NA non-coding upstream 53500 36178916 ~ 36179450 (+)
LOC120546691 NA non-coding upstream 67814 36160518 ~ 36165136 (+)
LOC120546684 NA non-coding upstream 99855 36122105 ~ 36133095 (+)
LOC120546689 NA non-coding upstream 104954 36124774 ~ 36127996 (+)
G189909 NA non-coding downstream 20385 36278127 ~ 36278512 (+)
G189885 NA non-coding downstream 66406 36324148 ~ 36382580 (+)
G189923 NA non-coding downstream 94607 36352349 ~ 36359955 (+)
G189892 NA non-coding downstream 197422 36455164 ~ 36529824 (+)
G189927 NA non-coding downstream 212581 36470323 ~ 36471383 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other upstream 18351 36213881 ~ 36214599 (+)
G189858 NA other upstream 213351 35981818 ~ 36019599 (+)
zbtb25 zbtb25 other upstream 315425 35912496 ~ 35917525 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other upstream 355009 35697127 ~ 35877941 (+)
LOC120546462 NA other upstream 699967 35526848 ~ 35532983 (+)
LOC120546466 NA other downstream 125166 36382908 ~ 36445635 (+)
G189944 NA other downstream 278937 36536679 ~ 36541312 (+)
xrcc3 NA other downstream 394436 36652178 ~ 36664382 (+)
LOC120546470 cdc42bpb other downstream 612818 36870560 ~ 36950069 (+)

Expression


Co-expression Network