LOC120546644


Basic Information

Item Value
gene id LOC120546644
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 36725350 ~ 36746137 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781745.1
TCACAGCGATGTGTTGATGTGCAGCCAGCCGAAGCTTCAGTGTCACGTTTTGGGCTGACTGTGTTCTGGCGCCGGTTAAAGACATGAAACCAACAGATGCTtcaaccacaaacacacagagaccttCTCCTGCTGCACAACTCCCCCCGCAGACACAGAGACCTTCTCCTGCTGCACAACTCCCCCCGCAGACACAGAGACCTTCTCCTGCTGCACAACTCCCCCCGCAGACACAGAGGGGATCCCCTCAGACCTCAGATGGAGATGGAGGATCTGAGCGACTACAGCGTTTACAGCCAGCTGACAGAcgaggagctgctgcagcttgcTGTGGAGAGAAGCCTGTCAGACCATCAGatgacatcatcatcttcaGCTTCAGACCCCCCCCACAGACCCGACCCCCTCACATCTCGAGACAACCCAAACTGCGACCCGTTTATTGACCTCTACAAAGCCCTCCGCAGAGGAGAGGAGGTGAGTCCTGTGCAAGCGGTGATTATGGACGGAGATGTGGCGGCTCTGATGGATTTGGTTGGCCGGCGGTGCAGCAGTCTGATGGAGCCCAACCATGATGGCTGGATCGCTCTGCATGATGCCGCTTATTACGGACAGCTGCACTGTGTCGCCATCCTCCTCAAAGCTTATCCCAACTCGGTGAACTCCTGGAGTTTGATGAATCAGACCGCTCTGCAGCTGGCTGCTGGTCGAGGACACGTTTCCTGTGTCGACTTCCTGCTGAAGCACGGAGCCGACCCAAACATCGCCAACAAGGACCGAGAGACGCCGCTACTGGCAGcATGTGAGCAGCCCAACCAAGCCATTGTGGAGCTGCTGTTGAAGTTCGGAGCTCAGGTGAATCGCTGCAACGTTCAGGGAGAAACTTGTCTTCACGTCGCATGCAGACACGGACAACTGAACCTCTGCAGGACGTTACTGGAGGCCGGAGCCGATCTGAACCGCAAGAACATCTACGGCCTGCAGCCCATCTTCACCGCCGCGCAGCACGGACACGTCGACCTCATCAACCTGTTCGCCAGCAAAGGTGCAGATATAAATGGACAGGCACCAGACGGAGCCTCGCCGCTGTTCGAAGCCTGTAAGAACGGTCATATTTCGGCGGTGGAAGCTCTGTTGTCTCTGAAAGCGGACGCTAACCGAGCCATGAAGTCTGGCCTGCTGCCTCTTCATGCAGCTGTTCAAAACAACCACTCACGgatTGTGTCGATGCTGATCCCTCTCACCAGCATGGTGCGAGTGCGGCACTGTGGCATCAGCCCGCTGCACCTTGCCGCGGAGCACAACCGGGACGAGATCCTGGCGCTGCTGATCCAGGCCGGCTTCGACGTGAACAGCCGGCTGTCGTCCGACCGCTCAGCGATGTTCGAGGACCGCCGCAGCACGGCGCTCTACTTCTCTGTGATCAACGGGAACCTGGAGGCCACCGAGATGCTGCTGGCAGCCGGCGCTGACCCAGACCTAGACGTGTTCAACCCGCTGCTGATCGCCGTGCGGTTCTGCTGGATGGAGAtggcggcgctgctgctgcactACGGCGCCAACGCCAACGCCCAGATCGCCACGGAGCCCTGTGCCTTCCCGGCGGCCATCTTGCTCCGGATGGAGTCCCTGCCGATGCTCAAGCTGCTGCTGGACCACGGCTGTGACGCCGCGACGTGCTTCGACTGTCCGCACGGCGGGAAAACGCACCCACCCATCACTCCGGCATGGCGGCCCGCCGAAGAGATGCGCGCCAGCAGAGTCACTCCGCCACGGCAATGCATTCAGTTCTGTGAGGCGGTATCCGGTAGCCGCAGCGCCGGGCCGATCATCTCGCTGCTGCTGGAGTACGTCGGCCACATCCATCTCTGCTCGCGGCTGCTGGACGTCCTGGACCGCCGCAGCGACTGGAAGCCCATCAAACGCAAAGCTCttcctcctcatcctctgaTGCAGCTCTGCAGGCTGAAGATCAGACATCAAGTTGGAGTTCGAAAACTCAAACTGCTCCACACTCTGCCACTTCCTGTCACTCTGGTCCGCTTCCTGCACTACGACGTCCAATGTTCACTCTTCTAAACTCTCCTGAACTCTCCTGAACTCTCCTGGACTCTCCTGGACTCTCATAAACTCTCATAAACTCTCATAAACTCTCCTGAACTCTCCTGAACTCTCCTAAACTCTCCTGAACCCTCCTAAACTCTCCTGGACTCTCCTGAACTCTCCTGAACTCTCCTGGACTCTCCTAAACTCTCCTGGACTCTCCTGAACTCTCCTAAACTCTCCTGGACTCTCCTGAACTCTCCTGAACTCTCCTAAATACCGGACTGCTGTTGTTAATGGCTAACGTAGACATTTTGCccaataaataatttatttgtttatt

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781745.1 True 2386 mRNA 0.57 9 36725350 36746137

Neighbor

gene id symbol gene type direction distance location
LOC120546651 NA coding upstream 43517 36666081 ~ 36681833 (+)
LOC120546666 NA coding upstream 392297 36330145 ~ 36333053 (+)
LOC120546639 NA coding upstream 412083 36269288 ~ 36313267 (+)
LOC120546641 NA coding upstream 467608 36232950 ~ 36257742 (+)
LOC120546647 LOC100696183,LOC102786976 coding upstream 869319 35843762 ~ 35856031 (+)
LOC120546642 NA coding downstream 11747 36757884 ~ 36774048 (+)
tmem251 NA coding downstream 44482 36790619 ~ 36793487 (+)
ubr7 LOC100699512 coding downstream 51058 36797195 ~ 36825407 (+)
G189985 NA non-coding upstream 1298 36714295 ~ 36724052 (+)
G189986 NA non-coding upstream 9352 36715383 ~ 36715998 (+)
G189973 NA non-coding upstream 62040 36662951 ~ 36663310 (+)
G189893 NA non-coding upstream 62729 36544183 ~ 36662621 (+)
G190000 NA non-coding downstream 79939 36826076 ~ 36826284 (+)
LOC120546682 NA non-coding downstream 80544 36826681 ~ 36831594 (+)
G190005 NA non-coding downstream 87973 36834110 ~ 36834410 (+)
LOC120546696 NA non-coding downstream 97753 36843890 ~ 36865869 (+)
G189943 NA non-coding downstream 204091 36950228 ~ 36950678 (+)
xrcc3 NA other upstream 60968 36652178 ~ 36664382 (+)
G189944 NA other upstream 184038 36536679 ~ 36541312 (+)
LOC120546466 NA other upstream 279715 36382908 ~ 36445635 (+)
G189897 NA other upstream 349516 36232665 ~ 36375834 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other upstream 510751 36213881 ~ 36214599 (+)
LOC120546470 cdc42bpb other downstream 124423 36870560 ~ 36950069 (+)

Expression


Co-expression Network