LOC120546653


Basic Information

Item Value
gene id LOC120546653
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34780338 ~ 34796403 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781766.1
CAGCGGAAGAGAAATAAAGTCTGAGGGAAAGGATAGATctgaaaaggaagaaaagagcAGCTTCGTCTCTGCCAGGGTTTCCTCGACACATGAAGGAGGAAAGAGTCTGTAAATAAACCCGAAGTGAGTCCAGCAGGTGGGAAATCACTGCAGAAgaatgtgattggctgtctaccACCTGTTGGACAAGTTTTGATGTcactggtgtgttttttttaagacttgAACTGATGTCATAAAggtgtgacacacacagacacccggAAGGACAAGGGAGAAATGAGCAGCTTCGTCTCTCCCAGCGTTTCCTCGACACAAGAAGGTGGAAAGAGTCTGTAAATAAACCTGGAGTGAGTTCAGCAGTGAACTATGGAACAATTTATTGAAAACTCCAGCCTCGAGGGCTTGGAGGTGATTGGCTCCGGAGGTTTCGGACAAATCTACAAAGCCAGGCATCGTCGGTGGGCGTGTGACGTGGCCATTAAACTGCTTCGTCATGACGATGGgaacaataAGTCTTTGCTGCGTGAGATTAAGATGATGCAAGAAGCAAGCAGCCCGCATGTTATTCGTGTCCTAGGGGTCTTCAAGGGTCAACCGCCCAATTCTGGCTGGGCAACCCAGCTTGGTGTGGTCATGGAGCTCATGGAGAGAGGATCACTGGCCTCCCTGCAGGAAGCCTTGGATGGACCTCCACCCTGGCCGCTGGTCTTCAGACTGGTTCACCAAGTGGCTCTGGGTATAAACTTCCTCCACAGTCTGCCTCGTCCTCATGGTCCCGTTCTCCACCTGGACCTGAAGCCCCAAAATGTGCTGTTGGACGACGCTCTCAATGCCAAGCTTACAGATTTTGGCCTTTCCCGGATTTCCTACAGCGTCTCACAAGTTTCCAGGAAGGATGATGAAGATTCAGGAGGGACAGTCAACTACATGCCCCCGGAGGCGTTTGGTTTAACATACAAACCTAAACGAGCCTCTGATATCTACAGtTATGGGATTCTCATTTGGTCCATTACCACAGGGGAAAAACCATATGAGTATGCAAACCCTGAGATGGTGATGATTCATGTCCCAGATGGAAAGCGTCCACCAATAGATGACATTAAGGGTGATGCTGCAGGGTTGACAGAGTTGAAAGAACTGATGAAGAGATGTTGGGACAATAAACCTGAAGAAAGGCCCCAAGCCCTTGAGTGTACAACCAAGACAGAAGAACTGTATCAGAAGCACAAACATGCAATTTCTGATACTGTCCATGAAGTGCTGAAGAAACTGGAccaaaaggaagaggaagAGAGTGATGTTGTTGATAACATGCCGACAGGTCCCTCGCCAATTCAGGaccaaaagaaaaaggaagacaAGGGAATGAAAGAGCAGTTTCAAAGAATTCAAATTGCTCAGGCTTCAGAGAGTGACCATTTTGAAGAAGAGGACGTTGTTGATTACGTGCGGAAAGGTCCCCCGCCAATTCAGgaagaaaaaaaggcgACACCTCAAGAGGTCCTCTTGGGAACTCTAGAACATTTGGGAGCCCAAGACTTTGAAACATTCAAGTGGTACCTGGAGGTCCTAAGAGACTTCCCAGCAATCCCAAAGAGTCGACTAGAGAATGCAAACAGGGTGAAGGTGGTGGATCAGATGTTCCAAACATACAGCATGAACACAATTAAAGTGACCAGAATAGTTTTAGGGAAGATGGGTCAGAACAAACTAGCGGAGAATTTATCATAGACCATTAATGAATAGTTtcataaaaacatacaaaatccTAAAATACAAGACACAAAGTATTTCACTTTAATAAAAAGCAAGAAtgagctaaataaataaatactattaAATAAATACTCTTGTCCAAAAAAGGAGTAGGAACAAGCAAAATGCTTTTTGGGTCCAACCCTTTTTGAAATGTCCATACCATTATCAAAGGGTTTTTTAtctattgtttttcaataaacaGCCATATAACCCTACAACCAAAAACATTGTGTTGTGTTTCGAGCACAAATTGTGGTCTAGTATCACTCCCAAAAACAAATTTTCATAAACTCTAACATATTATTGTAAAACATCACAACAACCTTTGTATTCTAATGTATTTCCCTTTTCCCAAACAccatacatttagtttttttcagatttattGATAATTAGTTTGAGTCAAACCACAATTTCAGCTTCCCTAATTCTTTTGAGACAACGTACAGCCGCTGCTGTAGGTTCTCCCCAGAACAAAAAATATTGGTGTCATCAGCAAAAACAACCCATTTCACAATACTAGATACTTTACATATATCACTGATGTATAAAATGACTAATTTAGGACCTAATATTAACCCTTGTGGCACACCACAtgtaatatgtaaatatgtttagTTGTAATCCCCCCATTTGTACaaattgttttctgttttcaatAAAGCTTTTTAACCAGTTGAGACTCTAA
>XM_039781767.1
GCCCAGCGGAAGAGAAATAAAGTCTGAGGGAAAGGATAGATctgaaaaggaagaaaagagcAGCTTCGTCTCTGCCAGGGTTTCCTCGACACATGAAGGAGGAAAGAGTCTGTAAATAAACCCGAAGTGAGTCCAGCAGGTGGGAAATCACTGCAGAAgaatgtgattggctgtctaccACCTGTTGGACAAGTTTTGATGTcactggtgtgttttttttaagacttgAACTGATGTCATAAAggtgtgacacacacagacacccggAAGGACAAGGGAGAAATGAGCAGCTTCGTCTCTCCCAGCGTTTCCTCGACACAAGAAGGTGGAAAGAGTCTGTAAATAAACCTGGAGTGAGTTCAGCAGTGAACTATGGAACAATTTATTGAAAACTCCAGCCTCGAGGGCTTGGAGGTGATTGGCTCCGGAGGTTTCGGACAAATCTACAAAGCCAGGCATCGTCGGTGGGCGTGTGACGTGGCCATTAAACTGCTTCGTCATGACGATGGgaacaataAGTCTTTGCTGCGTGAGATTAAGATGATGCAAGAAGCAAGCAGCCCGCATGTTATTCGTGTCCTAGGGGTCTTCAAGGGTCAACCGCCCAATTCTGGCTGGGCAACCCAGCTTGGTGTGGTCATGGAGCTCATGGAGAGAGGATCACTGGCCTCCCTGCAGGAAGCCTTGGATGGACCTCCACCCTGGCCGCTGGTCTTCAGACTGGTTCACCAAGTGGCTCTGGGTATAAACTTCCTCCACAGTCTGCCTCGTCCTCATGGTCCCGTTCTCCACCTGGACCTGAAGCCCCAAAATGTGCTGTTGGACGACGCTCTCAATGCCAAGCTTACAGATTTTGGCCTTTCCCGGATTTCCTACAGCGTCTCACAAGTTTCCAGGAAGGATGATGAAGATTCAGGAGGGACAGTCAACTACATGCCCCCGGAGGCGTTTGGTTTAACATACAAACCTAAACGAGCCTCTGATATCTACAGtTATGGGATTCTCATTTGGTCCATTACCACAGGGGAAAAACCATATGAGTATGCAAACCCTGAGATGGTGATGATTCATGTCCCAGATGGAAAGCGTCCACCAATAGATGACATTAAGGGTGATGCTGCAGGGTTGACAGAGTTGAAAGAACTGATGAAGAGATGTTGGGACAATAAACCTGAAGAAAGGCCCCAAGCCCTTGAGTGTACAACCAAGACAGAAGAACTGTATCAGAAGCACAAACATGCAATTTCTGATACTGTCCATGAAGTGCTGAAGAAACTGGAccaaaaggaagaggaagAGAGTGATGTTGTTGATAACATGCCGACAGGTCCCTCGCCAATTCAGAGAGTGACCATTTTGAAGAAGAGGACGTTGTTGATTACGTGCGGAAAGGTCCCCCGCCAATTCAGgaagaaaaaaaggcgACACCTCAAGAGGTCCTCTTGGGAACTCTAGAACATTTGGGAGCCCAAGACTTTGAAACATTCAAGTGGTACCTGGAGGTCCTAAGAGACTTCCCAGCAATCCCAAAGAGTCGACTAGAGAATGCAAACAGGGTGAAGGTGGTGGATCAGATGTTCCAAACATACAGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781766.1 True 2449 mRNA 0.43 14 34780341 34796403
XM_039781767.1 False 1594 mRNA 0.48 13 34780338 34795615

Neighbor

gene id symbol gene type direction distance location
LOC120546672 NA coding upstream 156165 34622056 ~ 34624173 (+)
LOC120546456 NA coding upstream 184732 34584047 ~ 34595606 (+)
LOC120546680 rrm2 coding upstream 208490 34559932 ~ 34571848 (+)
LOC120547363 NA coding upstream 210244 34569956 ~ 34570094 (+)
LOC120547362 NA coding upstream 214731 34565469 ~ 34565607 (+)
LOC120546655 NA coding downstream 40795 34837198 ~ 34845092 (+)
LOC120546649 NA coding downstream 60433 34856836 ~ 34895534 (+)
LOC120546635 NA coding downstream 109588 34905991 ~ 34927163 (+)
allc allc coding downstream 132015 34928418 ~ 34941331 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding downstream 391513 35187916 ~ 35193265 (+)
G189601 NA non-coding upstream 43384 34708726 ~ 34736954 (+)
LOC120546687 NA non-coding upstream 57641 34720047 ~ 34722697 (+)
LOC120546688 NA non-coding upstream 61153 34717037 ~ 34719185 (+)
G189590 NA non-coding upstream 64905 34714902 ~ 34715433 (+)
G189597 NA non-coding upstream 92451 34687524 ~ 34687887 (+)
G189711 NA non-coding downstream 34273 34830676 ~ 34836404 (+)
G189720 NA non-coding downstream 139114 34935517 ~ 35084911 (+)
G189735 NA non-coding downstream 153701 34950104 ~ 34950650 (+)
G189732 NA non-coding downstream 169928 34966331 ~ 34984803 (+)
G189729 NA non-coding downstream 219563 35015966 ~ 35081327 (+)
G189582 NA other upstream 80847 34663015 ~ 34699491 (+)
G189577 NA other upstream 135028 34564785 ~ 34645310 (+)
LOC120546652 NA other upstream 149403 34627478 ~ 34630935 (+)
G189555 NA other upstream 173000 34587078 ~ 34607338 (+)
LOC120546454 NA other upstream 194899 34531388 ~ 34585439 (+)
LOC120546458 NA other downstream 7200 34803603 ~ 34827491 (+)
G189738 NA other downstream 213097 35009500 ~ 35010825 (+)
G189721 NA other downstream 217992 35014395 ~ 35076967 (+)
LOC120546683 NA other downstream 349086 35145489 ~ 35147428 (+)
G189723 NA other downstream 361820 35158223 ~ 35166388 (+)

Expression


Co-expression Network