LOC120546659 (rrm2)


Basic Information

Item Value
gene id LOC120546659
gene name rrm2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34514822 ~ 34527646 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781778.1
TGTCATGTCAGCTTCGCCGAGGGGAAAGTCAATTTAATAAAATCTGATTTTAGAGGGATCTTTAAAAGCTAAAAACGTTCGTTTTAGAGCCTGAAACTTGAACACATAAACGCTGCAACACGGATATAAAAATGCTTTCTGCTCGCGCCCCTCTCTCCGTGAAGAATGAAAACTCAGTCAGCAGTAAGATGGACACCATGTCtctgaacaaagaaaacacGCCACCGAGCCTGAACACGACCCGCATCTTGGCGTCTAAAACCGCGCGAAAAATCTTCGACGACGCTACGCCCAAAGCCGTGAAGAAGAGCagcgaggaagaggaggagccgCTGCTGAAGGAGAACCCTCGTCGCTTCGTCATCTTCCCCATCCAGTACCACGACATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCAGAggagGTGGATCTGTCGAAGGACGGGCAGCACTGGGACTCTCTGAAGGACGAGGAGCGCTACTTCATCTCTCACGTGTTGGCGTTCTTCGCCGCCAGCGACGGCATCGTCAACGAGAACCTGGTGGAGCGCTTCACGCAGGAAGTCCAGGTGACCGAGGCCAGGTGTTTCTATGGTTTCCAGATCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTGCTCATCAACACCTACATCAAGAAGCCAGCAGAGAGAGAATACCTGTTCAACGCCATCGAGACTCTGCCCTGTGTGAAGAAGAAGGCCGACTGGGCCATCAACTGGATCGGCAACCAGAACGCCGGATTtggAGAGCGCGTGGTGGCCTTCGCCGCCGTGGAGGGAATCTTCTTCTCTGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGGGTCTCCACTGTGACTTTGCGTGTCTGATGTTCAAACATCTGGTGAACAAACCGTCGGCAGAAACAGTCACAGAGATCATCAGGAACGCTGTGGAGATCGAGCAGGAGTTCCTGACCGAGGCTCTGCCGGTGAAGCTGATCGGGATGAACTGTGAGCTGATGAAGCAGTACATCGAGTTCGTGGCCGACAGACTGATGCTGGAGCTCGGCTTCACCAAGatcTACCGCGTGGAGAACCCCTTTGACTTCATGGAGAACATCTCTCTGGAGGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGCGAGTACCAGCGGATGGGCGTGATGTCGGGCTCCACCGACAACACCTTCAGGCTGGACGCCGACTTCTGAGACCCAGGTGGCGCCATCGCACACTCAGCCACACGTTCACATGGCGGGACAATGACCACGCCGTTATGCGCTTAAAACACAAACTCTAAACCGGGACTAGAAAGTTCTCAgagtctcttctctctctctctctctctcaaagtgGAATCACTCCGAACTACATGTACAAAAAGGTCTCTTATCTCAGGTGTTTAAATTACTATTttatagggatgcaccgaatccagatttttggggttttcggctgaatcctgaaccccctg

Function

symbol description
rrm2 Predicted to enable ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor. Predicted to be involved in deoxyribonucleotide biosynthetic process. Predicted to act upstream of or within DNA replication. Predicted to be located in cytoplasm and membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Is expressed in several structures, including nervous system; pectoral fin musculature; pharyngeal arch 3-7 skeleton; proliferative region; and tail bud. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RRM2 (ribonucleotide reductase regulatory subunit M2).

NR:

description
PREDICTED: ribonucleoside-diphosphate reductase subunit M2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781778.1 True 1552 mRNA 0.53 11 34514822 34527646

Neighbor

gene id symbol gene type direction distance location
LOC120546638 NA coding upstream 141320 34357882 ~ 34373502 (+)
LOC120546567 NA coding upstream 160705 34343568 ~ 34354117 (+)
LOC120546450 NA coding upstream 181819 34318325 ~ 34333003 (+)
LOC120546449 NA coding upstream 327267 34184189 ~ 34187555 (+)
LOC120546562 NA coding upstream 341208 34110079 ~ 34173614 (+)
LOC120546680 rrm2 coding downstream 32286 34559932 ~ 34571848 (+)
LOC120547362 NA coding downstream 37823 34565469 ~ 34565607 (+)
LOC120547363 NA coding downstream 42310 34569956 ~ 34570094 (+)
LOC120546456 NA coding downstream 56401 34584047 ~ 34595606 (+)
LOC120546672 NA coding downstream 94410 34622056 ~ 34624173 (+)
G189553 NA non-coding upstream 11279 34419216 ~ 34503543 (+)
G189572 NA non-coding upstream 20335 34493696 ~ 34494487 (+)
G189537 NA non-coding upstream 57152 34409656 ~ 34457670 (+)
G189560 NA non-coding upstream 57530 34456627 ~ 34457292 (+)
G189535 NA non-coding upstream 76138 34394786 ~ 34438684 (+)
G189548 NA non-coding downstream 15021 34542667 ~ 34562894 (+)
G189575 NA non-coding downstream 16839 34544485 ~ 34546167 (+)
G189576 NA non-coding downstream 29152 34556798 ~ 34557154 (+)
G189579 NA non-coding downstream 49671 34577317 ~ 34582503 (+)
G189580 NA non-coding downstream 58377 34586023 ~ 34676086 (+)
G189541 zdhhc14,LOC102790573,LOC102208331 other upstream 11067 34482864 ~ 34503755 (+)
G189570 NA other upstream 27645 34486424 ~ 34487177 (+)
G189544 NA other upstream 49925 34462908 ~ 34464897 (+)
LOC120546451 LOC103364258,LOC108444017 other upstream 59478 34378500 ~ 34455344 (+)
LOC120546766 LOC103364256 other upstream 514286 33859146 ~ 34000536 (+)
LOC120546454 NA other downstream 3742 34531388 ~ 34585439 (+)
G189545 NA other downstream 21723 34549369 ~ 34552365 (+)
G189577 NA other downstream 37139 34564785 ~ 34645310 (+)
G189555 NA other downstream 59432 34587078 ~ 34607338 (+)
LOC120546652 NA other downstream 99832 34627478 ~ 34630935 (+)

Expression


Co-expression Network