gje1 (LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776)


Basic Information

Item Value
gene id gje1
gene name LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35187916 ~ 35193265 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781791.1
GCCAACCATGTCTTTAAACTACATCAAAAACTTCTATGAAGGATGCctCAGGCCTCCTACGGTGATAGGCCAGTTCCACACCTTGTTCTTCGGCTCGGTGCGGATGTTCTTTTTGGGAGTTCTTGGCTTCGCTGTGTACGGAAATGAGGCGCTGCACTTCAGCTGTGACCCCGATCGCCGAGAAATCAACCTGTACTGCTACAACCAGTTCAGACCCATAACACCTCAGGTCTTTTGGGCGTTACAACTGGTAACAGTGCTAGTTCCTGGGGCGGTCTTCCACCTCTACGCAGCCTGTAAGAACATTGACCAGGAAGAGATCCTCGAACGACCCATCTACACCGTATTCTACATAATTTCTGTTCTGCTTCGCATCATTCTGGAAGTCATCGCCTTCTGGCTACAAAGCCACCTCTTTGGCTTCCAGGTCCACCCTCTGTACAAATGTGATGCCAGTGCTTTGGAAAAGGCCTTTAATGTGACAAAGTGCATGGTGCCCGAACACTTTGAAAAAACCATCTTCCTCAGTGCCATGTACACCTTCACCGTGATCACCATACTCCTCTGTGTTGCTGAGATTTTTGAGATACTCTGCCGACGGCTTGGTTATCTTAGCAACCAATGACACATACAAACAAGCACGCATAAACGACTAAGGGTAAAAATACATGACACTAATTCTGCCAGTTTTTAATCGGGCTCTTGGTTAGCTACTGCTGgacttttataaaacaaaacaggaagCTGACATAAGAGCAAAACCTCACCTGTGGTCCATCGTGAGTGAGTTGCACCAAGAAATTTAAGAATGTGCGACAATGTCAGAGCTGGCAAGTCTGAAATAGTCTCTGGGTGTTTTTTGCCCTTAACTATAGAGTGATCATCCCTAGTGGTATTTCAGATATCAGTGGGTTTGTATTGGCTGTGTCCAAGGTCTGCGCCTCTGACTCTGAAATGTTGGGGGATGGGTTAGAAGTTTTCTTTTTACCACAAGAGAGATTGAAAGACAGGCATCAACTTCAGGGTGCTGCTAAAACCTGTAGCTATTGTTGAATTAGAGCACAAGGAAAGCCCGGTTAGTCACAAACCTGGCCCAAAACAACTTGAGGTTCGCCCAAACCCTGTTCTTGGAGCTGTACCTCATATCTGATCCTTCTACACATCCTGGAAGCATTACCCTGGGCTAATTAGGGCCTGGTTTACACTAAATGCAACAAGGCTCATTAAACCAACTAGATGTATCTTCACTTGGACACTTACGGAGTGCCAACAATGAACCTAAACAGCTCTATTTCATGAGATTTCTAAAGTTGCAGAACGCTTTGGTTAAAAGGCATTAAGTCTTCATGTAATGTAACAACATAAAACAATGCAAATCATTTAGCTAGTCACATAATTCTGCATTAAAGTGCAGATAAACACTATAGTCTAGCTTGTCTTCCAGGTGCTGATCAAATATGACAGGCAGATTATCACTCATGTCATTCTAAAGAAACTGTGGTCCAGTACCCATGTGTGAGTGAATTTCAGGTGCCATTGCTCCTGACACTTCCATGTGCCAGAGTTATCACTTCCAGCGTCTGTGTCTGGCGTTGCTTCCAGCCCGTTCTGACCTTTACTTCCATTGACATGAACGCCACAACTTTGTTGTGGGCTTTTGATGGAGTTGTCTGCCTTTTCAAATATCTGTTTCAGCATGGTGGGTCTTAAACAACCTTCAACGTGACTTGTAGAATGGAGAAAGGCTGTCTCAAAACACCAATCTCATGCGCCAgaaagtttttttaaaaatggcTTAGATTACTTCCATGAGATTTAAAGGCATCTTCGAAAAACGATGCATCAAGAAAATGgttgaaatgttgtgttttactCTTTGAGGGTAAAGATCTCCCCAAAGAATgtaataatctaaaaaaaaacaaataatcaaaCACTTCCTGGCTGACATTTTGAaactttaaagaaatatatagTCTGAATGATTAGTGACAAAAGTATTATTTGAATTTGGATATACAAATGTGGGTTGTAGTGTAGTTCTTAACAGACATGGACAAAATCTACATGGGAATTTAAAGTTTTTGGAGTTCAGACCCTATAGGTCtcatatataatacaataaggCTGAAAGCAaacacttaaaggtgctgta

Function

NR:

description
PREDICTED: gap junction epsilon-1 protein-like isoform X3

GO: NA

KEGG:

id description
K22039 GJE1, CX23; gap junction epsilon-1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781791.1 True 2155 mRNA 0.42 4 35187916 35193265

Neighbor

gene id symbol gene type direction distance location
allc allc coding upstream 246585 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 260753 34905991 ~ 34927163 (+)
LOC120546649 NA coding upstream 292382 34856836 ~ 34895534 (+)
LOC120546655 NA coding upstream 342824 34837198 ~ 34845092 (+)
LOC120546653 NA coding upstream 391513 34780338 ~ 34796403 (+)
vta1 vta1 coding downstream 10941 35204206 ~ 35345930 (+)
ccr6a NA coding downstream 196444 35389709 ~ 35403269 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 650497 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 1039685 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 1076023 36269288 ~ 36313267 (+)
G189752 NA non-coding upstream 6821 35126474 ~ 35181095 (+)
G189731 NA non-coding upstream 9548 35177625 ~ 35178368 (+)
G189763 NA non-coding upstream 12047 35174810 ~ 35175869 (+)
G189727 NA non-coding upstream 24401 35162057 ~ 35163515 (+)
G189755 NA non-coding upstream 50247 35135718 ~ 35137669 (+)
G189771 NA non-coding downstream 51259 35244524 ~ 35245381 (+)
G189767 NA non-coding downstream 65313 35258578 ~ 35446421 (+)
G189772 NA non-coding downstream 134924 35328189 ~ 35376943 (+)
G189784 NA non-coding downstream 239410 35432675 ~ 35509997 (+)
G189785 NA non-coding downstream 245696 35438961 ~ 35558041 (+)
G189723 NA other upstream 21528 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 40488 35145489 ~ 35147428 (+)
G189721 NA other upstream 110949 35014395 ~ 35076967 (+)
G189738 NA other upstream 177091 35009500 ~ 35010825 (+)
LOC120546458 NA other upstream 360425 34803603 ~ 34827491 (+)
G189770 NA other downstream 47990 35241255 ~ 35315037 (+)
G189769 NA other downstream 56476 35249741 ~ 35299978 (+)
LOC120546462 NA other downstream 333583 35526848 ~ 35532983 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 503862 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 719231 35912496 ~ 35917525 (+)

Expression


Co-expression Network