scml4 (LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495)


Basic Information

Item Value
gene id scml4
gene name LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17269861 ~ 17287641 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781811.1
cctctgcaggTAAATGAGATGCAGCTTTAAAGCCAGATAGGAAAATTATCCTCAACAACAGACCCGCTAACGAGTCAGTAACACGTTTCCCATCCAACTTGCGCCCTTGAGCACGTTAACGCCTACCAAAAACCTCCGGACAACGTTGGGAAGGTCAAACTGCGGCTTTGCTTCCCCGCCCCGCAGACTCTAGACCAGCCAGCGGTACTCGCTCGCTTCCCTGCCGCATATGCAGGGGTGGAACCCGGACAGACCCAAGCCGAGAGTTCCCCTTGTGTGCCTGCCGCTTCTGCTGCTCCATGCACCGACTCAGCGTCTGTCAGCCTGCTGTGGAGAATTGGATTCCCGTCGTCGAACCGACCCAATCGAGATAGTGTGATGTATCTCGCTTTCCCATGGCGGGCTGCGAGGGCATGAGACTGCGAGGCGGCCGGGATTTCAACCCTGACTCCTACCTGGAACTGGCCCATTCTCCTCCCCATCCTGTTGCTTGGTTACCTGGCGTCCTCAGCAAGGGTGTACGCCTTCGTCTGCGTTTGGATCGCCGTGACAACCGGGGGCGGAGCTGCTGGCAGCTGGTGGACTTGGAGGCGGGGTCAGAGCCAGTTGGGCGGAGGCTGAGGAGCCGGGCCCCCGACACCTGCACTCAAAgTCTGATGAATACCTTGTCCGCCGGCTCAGAGATGCAGACTCCAGCTCTCTGCCCCCAGTTCATAGCGGGGCCCCAGGGTAAGGTACCTGGCAGGAAGAGGGGACGGCCTCCTATCCGTAAGCTGGAGTTCCAGAGTCACTATGTTGAGCCTCTGTCGCCTCTCAAGGTCCCGAAGAAGAGAGGCAGGAAACCCGGCTTTAAGcTGAAGCCCAGGATGGTGATGTCCCCACTAGCTAACTCTCCTCCCAGCAGCACACCGGAGCCTGAGATGGGCTCCATCCCACAGGATGCTGCTATTGTCCCCCACTCTGCCACACCTCAAGTGCTAACAGCAGAGACGTCGATGCCTGAAGATTTCTTATGTGACCCACCAGTGGACTCCAAGCGCTACGCTGTAGATCCTAGTGACTCTGCCTTCAATGTCATGACATCACAGTACCCACCGAAGCATTCTTACGGTTACCGTGGCAGCAGTTGCTCTACCCCAATGGGCTTGTGCAGACAAGCATCGAGCCCAGGAAGCTTCCAGGAAGTAAACAGGAATGCATACAGTCCGATGCCAGACTCTGGAGAGTGCAAGCGTCCTGCTGGTAAGGACCCATCTAGCTGGGGTGTTGAGGAGGTTGTTTGGTTTATCAAAGATGCTGACCCCCAAGCCCTGGGTCCCCACGCTGACACATTCAGGAAGCATGAGATAGATGGAGATGCTCTGCTCTTGCTGAAAAGTGAGATGATGATGAAGTATCTGGGACTAAAGCTGGGACCTGCGCTCAAACTCTGTTACCACATCGAGAGGCTTAAACAAAATCGGTTGTGATTTGCTGCGGAGGAGCCAAACCCCTGATCACACTGCTGATTCTCTCATCTGTTCTCAACCATCAGCAATACATCATGAACACTTTTGGATCCTAATTTTGTTGACAAATTGGACATGTTGACTGTACATATTAAGACTATTTGCAGCTGAAGCAATTATTTCATTTCCATCATTGTTTACCAGGTATCTGAATGGCTTGAGATTGTTCGGTTCCACAAAGATGGCAGCTACTGTATAATGAAAGTGACCTGTCCACTCTTCAGTCTGCATCTGACTCTCAACAGCATGAATATGTGTAGATCAATATCATGGACAGGGTGCCAACGCCTCTGAAGACCTACAGACAGGGAACTTACCAAACTTGTTCAGTGCTTTACCTCAATAtcatatttaaatttaaaagagTCTTTGGGTTAAGGCACAATGCTgctgcagtttcaaaataatagTTTTGTTAGTTTTGCTGTAAACTGATGATAATGTTGACCCAGGTATCACTTCTCCTAGACACAAACTATAACTAATAACCAAACTCTCAAACTCTTCAGTAAGTATTgaaatatttagatttttgtttttagaaatattaaaacataaaaaactgcTTTAGAAACAAGTGATGTATCTCACACTCAAGAAAAGTGAAAGAAACATGAAGATTTTTACCACAAACCACAGCACAGCACAATAGTGAAGCGAGGTGCATGTAATCATGCAGCCCTCATAGCGacaggaaggaaaggagacaaAGACACTGTTTCTTTTACCATGTTCTCATGAATTGTGGTACACTGGAGTGGTGTAAGAGAAAGCAAAATGTAGCAAACTCATACAGTACAACTTGGTGCTCACTGAAACCGTTACTGCCACTACAACGCTTAACAATTGAATCACTCTCCTACACTTCCTTACTATCTCCAGATAGTGTGACCTCCAGATAACACAGAGATGACATTCTTCTCATGCAATACCTCTTCAGTCATTTTGAATATAAATTCCTCTGTTTTGTTATGTCAAATGATAAAGCAGTATTTCATTTCCAAACTGTAAAAAAGTATTACTATTAAGTAAACTGCCTTGAGCATTAATAATAAAAGTTTTGGCAGCCACCATATACAGTTTTGTCATATGAAACTTGTATACACATTAATGATCAGTCATGTGCAGTATATGACAAACTTGTACAACTTGTGGTTTATTACAATGCTTTATATCTTActgtacagtaggcctacttgttACTCACTTTGATCTTTTGTGTTCTTTGTGTTTCGCTTAAATTTGTTAACGTCAGTGTGCCACAGCATGTATGTCTATGTATGAATTATGTATTTCATGACTGTCTTGAGCCCGAGGGAGCGACAGTATGGGCTGCATCTAcctttcatattttattttccaatGTACAATGTACTTTTCCAACCTGATAACTTGATGCCAGTGAGTTGCAGGAAATGAGACAATTGTGTTGCACATGAGCTGTTTACCCAAATTAGAATTTTCCAAATGTTTTCCACAAATCAATTTTGACTTCCTAATgaccttccttttcttttctatacaatgttttttaaaccaTACTTTTTCCAGAGAAAATAAACCTTCTTGTTCAATGAA
>XM_039781812.1
ctccctctgcaggTAAATGAGATGCAGCTTTAAAGCCAGATAGGAAAATTATCCTCAACAACAGACCCGCTAACGAGTCAGTAACACGTTTCCCATCCAACTTGCGCCCTTGAGCACGTTAACGCCTACCAAAAACCTCCGGACAACGTTGGGAAGGTCAAACTGCGGCTTTGCTTCCCCGCCCCGCAGACTCTAGACCAGCCAGCGGTACTCGCTCGCTTCCCTGCCGCATATGCAGGGGTGGAACCCGGACAGACCCAAGCCGAGAGTTCCCCTTGTGTGCCTGCCGCTTCTGCTGCTCCATGCACCGACTCAGCGTCTGTCAGCCTGCTGTGGAGAATTGGATTCCCGTCGTCGAACCGACCCAATCGAGATAGTGTGATGTATCTCGCTTTCCCATGGCGGGCTGCGAGGGCATGAGACTGCGAGGCGGCCGGGATTTCAACCCTGACTCCTACCTGGAACTGGCCCATTCTCCTCCCCATCCTGTTGCTTGGTTACCTGGCGTCCTCAGCAAGGGTGTACGCCTTCGTCTGCGTTTGGATCGCCGTGACAACCGGGGGCGGAGCTGCTGGCAGCTGGTGGACTTGGAGGCGGGGTCAGAGCCAGTTGGGCGGAGGCTGAGGAGCCGGGCCCCCGACACCTGCACTCAAAgTCTGATGAATACCTTGTCCGCCGGCTCAGAGATGCAGACTCCAGCTCTCTGCCCCCAGTTCATAGCGGGGCCCCAGGGTAAGGTACCTGGCAGGAAGAGGGGACGGCCTCCTATCCGTAAGCTGGAGTTCCAGAGTCACTATGTTGAGCCTCTGTCGCCTCTCAAGGTCCCGAAGAAGAGAGGCAGGAAACCCGGCTTTAAGcTGAAGCCCAGGATGGTGATGTCCCCACTAGCTAACTCTCCTCCCAGCAGCACACCGGAGCCTGAGATGGGCTCCATCCCACAGGATGCTGCTATTGTCCCCCACTCTGCCACACCTCAAGTGCTAACAGAGACGTCGATGCCTGAAGATTTCTTATGTGACCCACCAGTGGACTCCAAGCGCTACGCTGTAGATCCTAGTGACTCTGCCTTCAATGTCATGACATCACAGTACCCACCGAAGCATTCTTACGGTTACCGTGGCAGCAGTTGCTCTACCCCAATGGGCTTGTGCAGACAAGCATCGAGCCCAGGAAGCTTCCAGGAAGTAAACAGGAATGCATACAGTCCGATGCCAGACTCTGGAGAGTGCAAGCGTCCTGCTGGTAAGGACCCATCTAGCTGGGGTGTTGAGGAGGTTGTTTGGTTTATCAAAGATGCTGACCCCCAAGCCCTGGGTCCCCACGCTGACACATTCAGGAAGCATGAGATAGATGGAGATGCTCTGCTCTTGCTGAAAAGTGAGATGATGATGAAGTATCTGGGACTAAAGCTGGGACCTGCGCTCAAACTCTGTTACCACATCGAGAGGCTTAAACAAAATCGGTTGTGATTTGCTGCGGAGGAGCCAAACCCCTGATCACACTGCTGATTCTCTCATCTGTTCTCAACCATCAGCAATACATCATGAACACTTTTGGATCCTAATTTTGTTGACAAATTGGACATGTTGACTGTACATATTAAGACTATTTGCAGCTGAAGCAATTATTTCATTTCCATCATTGTTTACCAGGTATCTGAATGGCTTGAGATTGTTCGGTTCCACAAAGATGGCAGCTACTGTATAATGAAAGTGACCTGTCCACTCTTCAGTCTGCATCTGACTCTCAACAGCATGAATATGTGTAGATCAATATCATGGACAGGGTGCCAACGCCTCTGAAGACCTACAGACAGGGAACTTACCAAACTTGTTCAGTGCTTTACCTCAATAtcatatttaaatttaaaagagTCTTTGGGTTAAGGCACAATGCTgctgcagtttcaaaataatagTTTTGTTAGTTTTGCTGTAAACTGATGATAATGTTGACCCAGGTATCACTTCTCCTAGACACAAACTATAACTAATAACCAAACTCTCAAACTCTTCAGTAAGTATTgaaatatttagatttttgtttttagaaatattaaaacataaaaaactgcTTTAGAAACAAGTGATGTATCTCACACTCAAGAAAAGTGAAAGAAACATGAAGATTTTTACCACAAACCACAGCACAGCACAATAGTGAAGCGAGGTGCATGTAATCATGCAGCCCTCATAGCGacaggaaggaaaggagacaaAGACACTGTTTCTTTTACCATGTTCTCATGAATTGTGGTACACTGGAGTGGTGTAAGAGAAAGCAAAATGTAGCAAACTCATACAGTACAACTTGGTGCTCACTGAAACCGTTACTGCCACTACAACGCTTAACAATTGAATCACTCTCCTACACTTCCTTACTATCTCCAGATAGTGTGACCTCCAGATAACACAGAGATGACATTCTTCTCATGCAATACCTCTTCAGTCATTTTGAATATAAATTCCTCTGTTTTGTTATGTCAAATGATAAAGCAGTATTTCATTTCCAAACTGTAAAAAAGTATTACTATTAAGTAAACTGCCTTGAGCATTAATAATAAAAGTTTTGGCAGCCACCATATACAGTTTTGTCATATGAAACTTGTATACACATTAATGATCAGTCATGTGCAGTATATGACAAACTTGTACAACTTGTGGTTTATTACAATGCTTTATATCTTActgtacagtaggcctacttgttACTCACTTTGATCTTTTGTGTTCTTTGTGTTTCGCTTAAATTTGTTAACGTCAGTGTGCCACAGCATGTATGTCTATGTATGAATTATGTATTTCATGACTGTCTTGAGCCCGAGGGAGCGACAGTATGGGCTGCATCTAcctttcatattttattttccaatGTACAATGTACTTTTCCAACCTGATAACTTGATGCCAGTGAGTTGCAGGAAATGAGACAATTGTGTTGCACATGAGCTGTTTACCCAAATTAGAATTTTCCAAATGTTTTCCACAAATCAATTTTGACTTCCTAATgaccttccttttcttttctatacaatgttttttaaaccaTACTTTTTCCAGAGAAAATAAACCTTCTTGTTCAATGAA

Function

NR:

description
PREDICTED: sex comb on midleg-like protein 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781811.1 False 3086 mRNA 0.46 7 17269861 17287638
XM_039781812.1 True 3086 mRNA 0.46 7 17269861 17287641

Neighbor

gene id symbol gene type direction distance location
lratd1 fam84a coding downstream 89150 17178364 ~ 17180711 (-)
ddx1 ddx1 coding downstream 304494 16956248 ~ 16965367 (-)
LOC120547041 NA coding downstream 313924 16937777 ~ 16955937 (-)
LOC120546412 NA coding downstream 336486 16912722 ~ 16933375 (-)
itsn2a itsn2 coding downstream 350183 16880795 ~ 16919678 (-)
sec63 sec63 coding upstream 3525 17291166 ~ 17306226 (-)
iyd iyd coding upstream 19471 17307112 ~ 17310447 (-)
armc1l LOC103368599,LOC104950028,LOC108242485 coding upstream 87556 17375197 ~ 17378628 (-)
myb myb coding upstream 178277 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 369013 17656654 ~ 17657876 (-)
G184989 NA non-coding downstream 99599 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 333680 16933693 ~ 16936181 (-)
G184903 NA non-coding downstream 445264 16824296 ~ 16824597 (-)
G184897 NA non-coding downstream 495590 16772721 ~ 16774271 (-)
LOC120547094 NA non-coding downstream 553544 16711035 ~ 16716317 (-)
G185031 ppp1r14c non-coding upstream 24844 17312485 ~ 17332973 (-)
G185039 map7,LOC107374525 non-coding upstream 74368 17362009 ~ 17362903 (-)
G185054 NA non-coding upstream 108830 17396471 ~ 17399451 (-)
G185035 NA non-coding upstream 138563 17426204 ~ 17432964 (-)
LOC120546280 NA non-coding upstream 231130 17518771 ~ 17521010 (-)
LOC120547341 NA other downstream 227 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 433878 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 751987 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1081531 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1201552 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 335483 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 477164 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 623629 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1202174 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1352780 18640421 ~ 18647401 (-)

Expression


Co-expression Network