sec63 (sec63)


Basic Information

Item Value
gene id sec63
gene name sec63
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17291166 ~ 17306226 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781813.1
ATGGCCGGGCAACAGTTCCAGTACGATGACAGCGGCAACACCTTTTTCTATTTCCTAACGTCCTTCGTCGGACTTATTGTGATCCCAGCAACATATTACCTCTGGCCCCGGGATCAGAATGCTGAACAACTGCGTCTGAAGAGCCTGAGGAGGGTACATGGCAGGTGCCTGTGGTACCGGCTCAGGCTGATGAAGTCACAGCAGAGCTTTGTCCCAACACTAAAgaaaGCAGCCTTGTTATTTGGCTGGGCTGTGTTCCTGCTGCTAGCCTACAAGGTGTCCAAGCTGGACAGGGAGTACCAGGAGTATAATCCATATGAAGTCCTCAACTTGGACccgGGTGCATCGCTGTCAGAAATCAAGAAGCAGTACCGTGTACTGTCACTCAAGTACCATCCTGACAAAGGTGGTAATGAGGCCACATTCATGAGAATTGCCAAAGCCTATGCTGCtttAACCAATGAACAGTCACGACAGAACTGGGAAATATATGGTAACCCAGATGGTCCAGGAGCAACCAGCTTTGGTATTGCCCTGCCTGCCTGGATTGTTGACCAGAAGAACTCAATGCTGGTGCTGTTGGTATATGGACTAGCCTTTATGGTCAtccttcctgttgttgtgGGCACATGGTGGTACCGCTCCATCCGATACAGCGGAGACCAGATCCTCATCAACACCACCCAGCTCTTCATGCATTTCATGTACAAGACGCCCAACATGAACATGAAGCGGTTAGCCATGGTGTTGACAGCAGCATTTGAGTTTGACCCTCGCAGCAATAAAGACGCCACCATACGACCAACAGACAACATTGAGGTGCCACAGTTGATTCGCGAGTTGGGAAATATCAATGTAAAGAAGAAGGAGCCTCCATTCTGCTATCCTTACAGTTTGAAGGCCAGGGTCTTAGTGCTTGCTCATCTGGCACGCATGGAAGTATCAGAGGAGTTGGAGGAAGATCAGAGGTTTGTGGTGAGGAAGAGTCCAGCTCTTCTCCAGGAGATGATCAACGTGGGCTGTCAGCTTACCATGATGGCCAACAGCAGAGGagGTTTCCATGCTCCTCGGCTGGTAACCATAGAGAATTGTATGAAGCTGACCCAAATGATAGTGCAGGGTCTGCAGGAGTCAAAGTCACCCCTGTTGCAGCTGCCCCACTTTGAGGAGGAGCACCTCCGCTACTGCATCTCTAAGAAGTATAAAGTCCGGAGCCTACAGGACCTGGTGAGTCTCAAGGACTCGGACAGACGCAGCATGCTGCGTTTCTTGGGGGAGGAGAAGTACGACGAGGTCCTGTCTGTGCTGGGCAGCTTCCCTCACATCACCATGGACACCAAACTGCAGGTCCTTGATGATGAAGACAGCAATAACATCACAGCAGGCTCTATTGTTACAGTAACTGTCACCTTAACCAGAAAACGGATGGCGGAGATGTTTGAAAAGGAGCAGGACTCAACACCATGTCTAACAGAAGAGGCTGCCACTACAGAGGAAGCAcagggAGACTCgagtaaaaccaaaacaaaagtgTGGCAGAACAAGAGTAAAGGGGCAAAGAAGACAGCCAAGTCCAAGAAGAAAAAATTAACCAAGAAGAAGGCCACTCCTGCACCCGCCAAAACCAAACAGGCCAATGGCAACGTGGCAGGAAATGAAGtcgtagcagcagcagcaacaacaacaacaacagcagcagcagtagtgaaGGAGGACGAGGACGAGGTCTCAGACAAGGGCAGCGAGTCGGACGAGGGCGAAGCCAACAAGGACTCTCCCAGCGAGAGAGACGAAGACAGCGACAAACAAAGCGACACAGAGGTGGACGAGATAGCTGGCGACGATGAAGAGGAGTGGGAGGCGTTGCAGCAAAGCATCCAGCGGCGAGAGCGGGCCCTGCTGGAGACCAAGTCCAAGGTGACGCACCCCGTCTACAGCCTGTACTTCCCCGAGGAGAAGCAGGAGTGGTGGTGGCTCTACATCGCCGACCGCCGAGATCAGACCCTGGTCTCCATGCCCTACCACGTCTGCACACTAAAAGACAcagaagagGTGGAGCTGAAGTTTCCAGCCCCCTCCAAAACAGGCAATTACCAATATTCTGTCATCCTTCGTTCTGATTCCTACCTGGGACTGGACCAGATCAAACCACTCAAGCTGGAGGTCCACGAGGCCAAAGCCATGCTGGACAACCACCCACAGTGGGACATCCCAGAcacggaggaggaggacgaggagcaGGAGGACAGCGACGGTATCGAGGAGAGCGAGGACGATGACGAGGACAACGACTGAATGcggatacacacgcacacacacacacacacgcgcacacacacacacacacacacacacacacacacacacacactcagccccCCGCCCCAAACAGTACCCAAGAGCAGTGAACAAGGAGCAGTAAAGCTGtgcctgcaacacacacaccaaacgcacacaca

Function

symbol description
sec63 Predicted to enable RNA binding activity and protein transmembrane transporter activity. Acts upstream of or within endoplasmic reticulum unfolded protein response; liver development; and myelination. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be part of Sec62/Sec63 complex. Used to study fatty liver disease and polycystic liver disease. Human ortholog(s) of this gene implicated in polycystic liver disease. Orthologous to human SEC63 (SEC63 homolog, protein translocation regulator).

NR:

description
PREDICTED: translocation protein SEC63 homolog isoform X1

GO:

id name namespace
GO:0031204 posttranslational protein targeting to membrane, translocation biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K09540 SEC63, DNAJC23; translocation protein SEC63

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781813.1 True 2459 mRNA 0.52 20 17291166 17306226

Neighbor

gene id symbol gene type direction distance location
scml4 LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495 coding downstream 3525 17269861 ~ 17287641 (-)
lratd1 fam84a coding downstream 110455 17178364 ~ 17180711 (-)
ddx1 ddx1 coding downstream 325799 16956248 ~ 16965367 (-)
LOC120547041 NA coding downstream 335229 16937777 ~ 16955937 (-)
LOC120546412 NA coding downstream 357791 16912722 ~ 16933375 (-)
iyd iyd coding upstream 886 17307112 ~ 17310447 (-)
armc1l LOC103368599,LOC104950028,LOC108242485 coding upstream 68971 17375197 ~ 17378628 (-)
myb myb coding upstream 159692 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 350428 17656654 ~ 17657876 (-)
LOC120547287 NA coding upstream 391212 17697438 ~ 17701407 (-)
G184989 NA non-coding downstream 120904 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 354985 16933693 ~ 16936181 (-)
G184903 NA non-coding downstream 466569 16824296 ~ 16824597 (-)
G184897 NA non-coding downstream 516895 16772721 ~ 16774271 (-)
LOC120547094 NA non-coding downstream 574849 16711035 ~ 16716317 (-)
G185031 ppp1r14c non-coding upstream 6259 17312485 ~ 17332973 (-)
G185039 map7,LOC107374525 non-coding upstream 55783 17362009 ~ 17362903 (-)
G185054 NA non-coding upstream 90245 17396471 ~ 17399451 (-)
G185035 NA non-coding upstream 119978 17426204 ~ 17432964 (-)
LOC120546280 NA non-coding upstream 212545 17518771 ~ 17521010 (-)
LOC120547341 NA other downstream 21532 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 455183 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 773292 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1102836 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1222857 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 316898 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 458579 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 605044 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1183589 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1334195 18640421 ~ 18647401 (-)

Expression


Co-expression Network