znf395b (znf395)


Basic Information

Item Value
gene id znf395b
gene name znf395
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 9505432 ~ 9527428 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781899.1
GACACACGTAGCCTACGTAGGCGAGTATCCAACCGACCGACCAACCCCCttctcccccgccccccccgGTCGACTGGAGAACCGGCAAGCGGCGGGACGAGCGCTGCAGCTCCGACGGGACGGACAGGACGGAGGTCTCCACCGAACGAGGAGGTGTGTTACTGGGCTGAGTCCCCTCATTGTGTGCAGCAGCACCATGGCAGCTATGGGACCTGAGGACAGAGTTGGAGCAGGGCCAGGCGGGACGGCAGTCTGCCAGGTGGGACTACAGGCCTGCACCGCTACAACCACGCACAACAGCAACGGGCCTGACACGCAGCAGACTCTGGTGTGTACACAGAGGCGTGTCCAGGCTGGGAAAACATTCGTGGAGAGCAGACATCACGAGAACAAAACATCCGTTCCCCCGGCACAAAGGGAGGCTGAGCGAGGCTGGAAAAACCTGGCAGCTCCCTTGGAAACTATGGGACCCACAATGCACCTCACCAATGCACCAGCTACTAGAGAGGTGCCTTACAGTTTCCGCAGCCCAGAGTCAGTGGAGATGGACGAGATCATGGCCGCCATGGTTCTGACCAGTCTGTCCTGCAGCCCCGTGGTCCAGAGCCCTCCACACACAGATCCTGTACCAGCCGGCTCATCATCGTCAGCTGACATGGAGTGTGGTGGCGGCGAGCTCTCCGACAGCGGCAGCAGCGGCTACTGGAGCTGGGACCACGGCAACGTGAGCCCCGCCCCCTCGCCGTCCGTCACTGAGATGGACGGCAGCCTTGATGAAGGCCTACAAATGGAACTGGATCAGGGAGAGGAGCTAAATGCCAAAAAGCCAAAGAGCTCTTTCAGAGGTGTGTATAAGTGTCTGTGGCCCGGTTGTGGCAAGGTGCTCACGTCTTCAGTCGGAATAAAAAGACACATCCGGGTGCTACATCTGGGcagtgggTCAGATCAGTCCCAGAGAGAAGAGGACTTCTACTACACCAAGATCTCCTGTGAGACTGTGGATGCCTGCTCCGTTCCAGCTCCTTTAGTTCCTCCAGCTCCTTCCCAGCAGGCTCTGGGCCAGGCTTCATCCTCTCAACTCAGCTGGGCCTCCTGCGCTTCTACTGTGGCCTCGGGGCTCCAGATCCCCCCAGATCACAGACCCAGGTCCAACTCCAGCTCCGGGGCCGGCCCGAGCAGGCCCAGTCCACTCAGCCAGTCGGCCCCCAGCAGCTTCTGGCAGATCCACTCCGAACATCTCTATCAGGCCTGTAGCCCCGTCCAGGTATCTGTGGCCTCCAAAAGCCCCGGCTGCCAGGGTTGGACCCCTTCCGCCTCCGTCTCTGGTCCCAGTAACACTCCGGTGGTGAAAGCTCGCTGTCGGTCCGTCAGTGTCGGGGAACAGTGGCTCCAGCAGAACAGGCTGCAGCCTATGAGCGCGTCGCCTTCCCGCACTCACTGCTCCTTCAGGAAGGGTCGCGGGGAGGCCAAAAAGTGCCGCAAGGTGTACGGAGTGGAGCGCAAGGACCAGTGGTGCACCGCCTGCCGCTGGAAAAAAGCCTGCCAGCGCTTCCCCGACTAAAGGCGGCAGCGCGAGCGAGAGACGGAAGACgtggatggacggatggatggatagatggatggatggatggatggatgagtgataaaaaaaaacttttaacttttatcAAAAGAGAGGATATAAATAAGGGCCCGAGAGCCGTCAAGGAAAACAACagttctgttttttgttttttgtcttacTTTTCaactctttttgtttctttcctaaaaGAAATTGCAAATGGACTTTTCTGTATCTTTGTAACTTGATCCTGAAAACTGAAGTCTGCGATGGTGCTAACTGTTGACTGACTTTGAACATGTGATGTGCTAAGCCTACAATACTCTCCTACTTTATCCAAAGGTTCATCTTTACTGCTCCTGTAGCTCCACTGTATTAGACTGCTACTTGGCTGTTTTTCCTTCATTCTAACCCTATCTTCCAGTGGTTACACGGTGGTTATGATGTACATTATATTGTGTGCTTTGAGTTACGTACAAGTATTTTataccttgtttttttttttttttaaatcgtctCTTTCCGCCCGTGTATCGGGCAGATTATCTTTTTTGGAATTTACATGTTTTTTGGCACTTTGTTGAAATATGAACTCACAAGAATAAGCTACGTTTGGTTTCGACTCAACCAAGTACCTATTTCCTTCCTGCCCATGTGTTGGCATACAACCAGTGTTAATGGTTTAATCCGTGAAGCTATGGAGTCATGGCAATGAGACTAGCATTAGGGGAATGAGTTGGTaatagcaataaaaaaaaaataaaagaggaaaTATATTGtcaaacacaaattaaaaagcACTGAGAATttgaaactta
>XM_039781901.1
GACACACGTAGCCTACGTAGGCGAGTATCCAACCGACCGACCAACCCCCttctcccccgccccccccgGTCGACTGGAGAACCGGCAAGCGGCGGGACGAGCGCTGCAGCTCCGACGGGACGGACAGGACGGAGGTCTCCACCGAACGAGGAGGTGTGTTACTGGGCTGAGTCCCCTCATTGTGTGCAGCAGCACCATGGCAGCTATGGGACCTGAGGACAGAGTTGGAGCAGGGCCAGGCGGGACGGCAGTCTGCCAGGTGGGACTACAGGCCTGCACCGCTACAACCACGCACAACAGCAACGGGCCTGACACGCAGCAGACTCTGGTGTGTACACAGAGGCGTGTCCAGGCTGGGAAAACATTCGTGGAGAGCAGACATCACGAGAACAAAACATCCGTTCCCCCGGCACAAAGGGAGGCTGAGCGAGGCTGGAAAAACCTGGCAGCTCCCTTGGAAACTATGGGACCCACAATGCACCTCACCAATGCACCAGCTACTAGAGAGGTGCCTTACAGTTTCCGCAGCCCAGAGTCAGTGGAGATGGACGAGATCATGGCCGCCATGGTTCTGACCAGTCTGTCCTGCAGCCCCGTGGTCCAGAGCCCTCCACACACAGATCCTGTACCAGCCGGCTCATCATCGTCAGCTGACATGGAGTGTGGTGGCGGCGAGCTCTCCGACAGCGGCAGCAGCGGCTACTGGAGCTGGGACCACGGCAACGTGAGCCCCGCCCCCTCGCCGTCCGTCACTGAGATGGACGGCAGCCTTGATGAAGGCCTACAAATGGAACTGGATCAGGGAGAGGAGCTAAATGCCAAAAAGCCAAAGAGCTCTTTCAGAGGTGTGTATAAGTGTCTGTGGCCCGGTTGTGGCAAGGTGCTCACGTCTTCAGTCGGAATAAAAAGACACATCCGGGTGCTACATCTGGGtgggTCAGATCAGTCCCAGAGAGAAGAGGACTTCTACTACACCAAGATCTCCTGTGAGACTGTGGATGCCTGCTCCGTTCCAGCTCCTTTAGTTCCTCCAGCTCCTTCCCAGCAGGCTCTGGGCCAGGCTTCATCCTCTCAACTCAGCTGGGCCTCCTGCGCTTCTACTGTGGCCTCGGGGCTCCAGATCCCCCCAGATCACAGACCCAGGTCCAACTCCAGCTCCGGGGCCGGCCCGAGCAGGCCCAGTCCACTCAGCCAGTCGGCCCCCAGCAGCTTCTGGCAGATCCACTCCGAACATCTCTATCAGGCCTGTAGCCCCGTCCAGGTATCTGTGGCCTCCAAAAGCCCCGGCTGCCAGGGTTGGACCCCTTCCGCCTCCGTCTCTGGTCCCAGTAACACTCCGGTGGTGAAAGCTCGCTGTCGGTCCGTCAGTGTCGGGGAACAGTGGCTCCAGCAGAACAGGCTGCAGCCTATGAGCGCGTCGCCTTCCCGCACTCACTGCTCCTTCAGGAAGGGTCGCGGGGAGGCCAAAAAGTGCCGCAAGGTGTACGGAGTGGAGCGCAAGGACCAGTGGTGCACCGCCTGCCGCTGGAAAAAAGCCTGCCAGCGCTTCCCCGACTAAAGGCGGCAGCGCGAGCGAGAGACGGAAGACgtggatggacggatggatggatagatggatggatggatggatggatgagtgataaaaaaaaacttttaacttttatcAAAAGAGAGGATATAAATAAGGGCCCGAGAGCCGTCAAGGAAAACAACagttctgttttttgttttttgtcttacTTTTCaactctttttgtttctttcctaaaaGAAATTGCAAATGGACTTTTCTGTATCTTTGTAACTTGATCCTGAAAACTGAAGTCTGCGATGGTGCTAACTGTTGACTGACTTTGAACATGTGATGTGCTAAGCCTACAATACTCTCCTACTTTATCCAAAGGTTCATCTTTACTGCTCCTGTAGCTCCACTGTATTAGACTGCTACTTGGCTGTTTTTCCTTCATTCTAACCCTATCTTCCAGTGGTTACACGGTGGTTATGATGTACATTATATTGTGTGCTTTGAGTTACGTACAAGTATTTTataccttgtttttttttttttttaaatcgtctCTTTCCGCCCGTGTATCGGGCAGATTATCTTTTTTGGAATTTACATGTTTTTTGGCACTTTGTTGAAATATGAACTCACAAGAATAAGCTACGTTTGGTTTCGACTCAACCAAGTACCTATTTCCTTCCTGCCCATGTGTTGGCATACAACCAGTGTTAATGGTTTAATCCGTGAAGCTATGGAGTCATGGCAATGAGACTAGCATTAGGGGAATGAGTTGGTaatagcaataaaaaaaaaataaaagaggaaaTATATTGtcaaacacaaattaaaaagcACTGAGAATttgaaactta

Function

symbol description
znf395 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in cytosol and nuclear speck.

NR:

description
zinc finger protein 395-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781899.1 True 2382 mRNA 0.53 10 9505432 9527428
XM_039781901.1 False 2379 mRNA 0.53 10 9505432 9527428

Neighbor

gene id symbol gene type direction distance location
si:ch211-63o20.7 LOC103362993,LOC101481409 coding downstream 34915 9460778 ~ 9470517 (-)
LOC120547212 NA coding downstream 102667 9330484 ~ 9402765 (-)
disp1 disp1 coding downstream 217229 9155024 ~ 9288203 (-)
brox brox,LOC102780098 coding downstream 485004 9003269 ~ 9020428 (-)
LOC120546203 NA coding downstream 505112 8998892 ~ 9000320 (-)
paqr8 paqr8 coding upstream 22576 9550004 ~ 9556929 (-)
stmn4 stmn4 coding upstream 76060 9603488 ~ 9622711 (-)
LOC120546991 NA coding upstream 326312 9853740 ~ 9855384 (-)
LOC120547068 NA coding upstream 417437 9944865 ~ 9945741 (-)
LOC120547244 NA coding upstream 608572 10136000 ~ 10137776 (-)
G183258 NA non-coding downstream 60 9501912 ~ 9505372 (-)
G183256 NA non-coding downstream 12028 9493179 ~ 9493404 (-)
G183213 NA non-coding downstream 176909 9327400 ~ 9328523 (-)
G183214 NA non-coding downstream 178144 9325247 ~ 9327288 (-)
G183189 NA non-coding downstream 271634 9233511 ~ 9233798 (-)
G183263 NA non-coding upstream 5118 9532546 ~ 9543226 (-)
G183296 NA non-coding upstream 159294 9686722 ~ 9687119 (-)
G183298 emilin1,LOC103398511,LOC103372345 non-coding upstream 181625 9709053 ~ 9715339 (-)
G183299 LOC103398511 non-coding upstream 189162 9716590 ~ 9718205 (-)
G183317 snap25,snap25a,LOC107719097,LOC102796069,LOC107698362,LOC107599071 non-coding upstream 302448 9829876 ~ 9846858 (-)
G183176 NA other downstream 371960 9129573 ~ 9133472 (-)
LOC120546609 LOC104943934,LOC103373611,LOC100711814,LOC102780583,LOC101487794,LOC102295678 other downstream 480867 9020960 ~ 9024565 (-)
LOC120546397 NA other downstream 718214 8781328 ~ 8787218 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other downstream 1378768 8049458 ~ 8126664 (-)
G182977 NA other downstream 1480388 8024715 ~ 8025044 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other upstream 572050 10099478 ~ 10101061 (-)
LOC120546776 NA other upstream 927816 10455244 ~ 10610625 (-)
G183528 NA other upstream 993289 10520717 ~ 10521410 (-)
G183650 NA other upstream 1846680 11374108 ~ 11374615 (-)
ost4 NA other upstream 3379874 12907302 ~ 12908747 (-)

Expression


Co-expression Network