LOC120546759


Basic Information

Item Value
gene id LOC120546759
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21751292 ~ 21754890 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781940.1
GGAGCACATGGTGTGTTTCAGTGTTGTGACTGTGACCGCCTGTGTCAGTAAGTCATTATCTTCAAGAACTGTATTTAGAGGGACAGGAGACGGGCTCAATCCGCCACACAGAAAttcacacaaacattcaactgAGAAGTCCCGTGGGTGTCTCTCTATTTTTGCAGAGGTTTAAAGATCCCTCTTTATCTGCAATCATGATCCAATTGCTGAGCGTAGCCATTGTTGCAGGATTGTTCTTTGAAAGCAACCAGCAGACAGCCAGAGTGTCGGACTTAGTTTTACTCCCTAAACCAGGATGCTGGACACGCTGGTTTGACAGAGATGACCCCTCTGGAAGTGGAGACTGGGAAACCCTCTCTGATCTTCGCAATGAGTACCCAGGAAAGATCTGCTCTAAACCATTAGCTATTGAGGCGAGAACTCTATCTGGACTCACTGTGGCTGCAGCAGGTGATGTGATTTATCTaaggGACACCACTAAAGGATTTGTCTGCAGGAACCAGGACCAACCCAGGCCTAAGATGTGTAAGGATTATCGTGTTCGTTTCAGCTGCCCTCGCTCTTTCTGTAAAGTGTGCTGGACCCAGTGGTATAACCGCGACGCTCCCAGTGGAACAGGGGACTGGGAGAGTTTGACTAACCTGAGGACAGAAAACCCGGGACAAATCTGTGTCAGCCCAATGTCCATTGAGGCTGTTACCTCTGACACATTGACCCCAGCCCTCTCCACAGGGCAGACCTTTATTTACAATCAAAATGAGGGATTGGTTTGCCACAATACAGACCAGGAATCTGGCTTGTGCCTTGACTACAAAGTTCGGTTTGGGTGCCCATGCTAAGTCCTGACTCCACAGCAAACACTGCGAAGGATAAGACTCATTTAATAAAATTTCTCAATTTTCTCAGA
>XM_039781941.1
TTTCAGTGTTGTGACTGTGACCGCCTGTGTCAGTAAGTCATTATCTTCAAGAACTGTATTTAGAGGGACAGGAGACGGGCTCAATCCGCCACACAGAAAttcacacaaacattcaactgAGAAGTCCCGTGGGTGTCTCTCTATTTTTGCAGAGGTTTAAAGATCCCTCTTTATCTGCAATCATGATCCAATTGCTGAGCGTAGCCATTGTTGCAGGATTGTTCTTTGGATGCTGGACACGCTGGTTTGACAGAGATGACCCCTCTGGAAGTGGAGACTGGGAAACCCTCTCTGATCTTCGCAATGAGTACCCAGGAAAGATCTGCTCTAAACCATTAGCTATTGAGGCGAGAACTCTATCTGGACTCACTGTGGCTGCAGCAGGTGATGTGATTTATCTaaggGACACCACTAAAGGATTTGTCTGCAGGAACCAGGACCAACCCAGGCCTAAGATGTGTAAGGATTATCGTGTTCGTTTCAGCTGCCCTCGCTCTTTCTGTAAAGTGTGCTGGACCCAGTGGTATAACCGCGACGCTCCCAGTGGAACAGGGGACTGGGAGAGTTTGACTAACCTGAGGACAGAAAACCCGGGACAAATCTGTGTCAGCCCAATGTCCATTGAGGCTGTTACCTCTGACACATTGACCCCAGCCCTCTCCACAGGGCAGACCTTTATTTACAATCAAAATGAGGGATTGGTTTGCCACAATACAGACCAGGAATCTGGCTTGTGCCTTGACTACAAAGTTCGGTTTGGGTGCCCATGCTAAGTCCTGACTCCACAGCAAACACTGCGAAGGATAAGACTCATTTAATAAAATTTCTCAATTTTCTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781940.1 True 910 mRNA 0.48 9 21751292 21754890
XM_039781941.1 False 841 mRNA 0.47 7 21751584 21754890

Neighbor

gene id symbol gene type direction distance location
LOC120546757 NA coding upstream 23950 21723642 ~ 21727342 (+)
acat2 acat2,LOC102788057 coding upstream 58166 21687280 ~ 21693126 (+)
LOC120546740 wtap coding upstream 64375 21680522 ~ 21686917 (+)
fndc1 fndc1 coding upstream 97724 21617339 ~ 21653568 (+)
drc1 NA coding upstream 225990 21512574 ~ 21525302 (+)
LOC120547079 NA coding downstream 51125 21806015 ~ 21809674 (+)
LOC120547078 NA coding downstream 79588 21834478 ~ 21843556 (+)
paplnb NA coding downstream 183588 21938478 ~ 21944082 (+)
smek1 ppp4r3a,LOC102789800 coding downstream 192409 21947299 ~ 21961671 (+)
LOC120546953 eva1a coding downstream 377951 22132841 ~ 22211477 (+)
LOC120546760 NA non-coding upstream 4738 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 208511 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 275988 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 402711 21347944 ~ 21348581 (+)
LOC120546175 NA non-coding upstream 598108 21151444 ~ 21153184 (+)
LOC120547080 NA non-coding downstream 78058 21832948 ~ 21833782 (+)
G186452 NA non-coding downstream 539552 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 780769 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 962080 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 1044845 22799735 ~ 22800058 (+)
gtf2h5 gtf2h5 other upstream 578653 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 1891075 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2103136 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 2130509 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 2209460 19429595 ~ 19541832 (+)
erh erh,LOC100699790,LOC101174968 other downstream 189853 21944743 ~ 21947000 (+)
G186394 mycn,LOC108233328 other downstream 230889 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 526077 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 1052989 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 1207143 22962033 ~ 22966010 (+)

Expression


Co-expression Network