gopc (gopc)


Basic Information

Item Value
gene id gopc
gene name gopc
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 5986437 ~ 6009440 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781981.1
CTGATTGGCCCGTTGGCCTCACAGATCGTGAGTCTAATATTGGACTTCCTGGTCAAGTAATGTTAGTGCTTTTCACAAGAGAATCGGAAAACGCAATTTGTCAGACTTATCTCCGCTAACCCAATACGTAATCTAGTCGTCGGGTTTCAACGTTATTTCGCAGTGGCAAACAGGGAGGGGATCTATTACCGTTAACATTACTCACCATAAAAGCTAGTACGCTAACGTTGACGTAGGGCTCTGTATTGCTCTAGCCATGTCCGCTTCGGCTGGATCCTCCCCAACGGGTCATAGCTCGGGCCTTGGCCCCGGTATGTCTATGTTTCGCTGGCTAGAAGTGCTGGAGAAAGAGTTTGACAAGGCCTTCGTGGATGTGGATCTGCTGCTCGGAGAAATAGACCCAGATCAAGTCGATATTACGTACGAGGGTCGGCAGAAGATGACCAGCCTAAGCTCCTGTTTTGCTCAGCTCTGTCACAAAACCCAGACGGTTTTCCAACTGAACCATAAACTAGAGGCTCAGCTGGTGGACCTCCGATCTGAGCTGACTGAGGCTAAGGCGGAGCGAaaagtaatagaaagggaggtCCATGACCAGCTCCTGCAGCTTCATGCTCTCCAGTTGCAGCTACATTCTAAGCAAGGTCAGGCTGAGGACTCTGAATCCATCAAAGACAGACTGCCTGCATCAACTTTGGAAGAGATGGAACAGGAGCTTGAGGTCAGCAAGAAGGAGAAATTAGCAGAGGCAAGGCTGGAAACAGAAGGGAGACTatttaagaaagaaaatgaggCTCTTCGCAGACACATGGCAGTACTGCAGGCCGAAGTGTATGGAGCCAGACTGGCTGCCAAATACTTGGACAAGGAACTGGCTGGCAGGGTGCAGCAGATCCAGTTACTGGGCCGTGACATGAAAGGACCTGCACATGACAAGCTGTGGAACCAACTGGAGGCAGAGATTCACCTTCACCGCCATAAGACTGTCATCCGAGCATGTAGGGGTCGTAATGATCCTAAGAAACCTCTGCCCTCTCCTGTTGGACATGACCCAGACATCTTGAAGAAAACCCAGGGAGTTGGCCCTATCAGAAAAGTGGTGCTAGTCAAAGATGATCATGAGGGTCTTGGAATCTCCATTACAGGTGGGAAGGAGCACGGTGTTCCCATTCTAATTTCAGAGATCCATCCAAGTCAGCCTGCAGACAGATGTGGAGGTCTGCATGTCGGGGATGCCATCCTTGCTGTCAACAGCATCAATTTGCGAGATGCCAAACACAAGGAGGCTGTCACCATTCTGTCCCAGCAGCGAGGACAGATAGAGTTTGAGGTGGTGTATGTGGCTCCAGAGGTGGACAGCGATGATGAGAATGTGGAGTATGAAGACGACAGTGGCCATCGCTATCGACTCTACCTAGATGAACTGGAGGACAGCAGCACAGCGGCACCCAGCAACAGCTCGGCATCACTGCAGGCTCTGGAAAAGATGTCACTGAGCAATGGACCAGAGAATGGAGACACTGGGATCTCCATTGAGACAACTTCAGATGAAACCCCTTCAAAGCCACCTGAGTCTGACTGCTCTTCCTAAAGGCTCAGCCTAGCCATTGGTATTTGGAGATATAACGAGGATTTGTGGAAAGATTCCCTCTCAAAGAACTGAATTAAAGAATTCTATGACTAGGGACAAGGGAAAATTAACAGAGAAAGTCTATTTTCCCTTTTTCCTCTTGGTGTTGTGGGGTGGTGGGATTTGGGGGTCTGGCCTGGGCATGTGGCAATGATTTGGGGTAAAAGTTCACATTTGAAGAAGCGGAGGTGTAAAATTTGTAGAGGAGGGAGCAATACTGAACAATGTGACTTTTTCTTGATATTATATTAAGATAATGAAAATTGACAGGATAGCTGTATGTGAGAAAACCGCAGAAGGAAGTAGATGTCATGGAGGAACACTGACATCATGAAAGAAGAAGTtattcattttgaaaatgtctttcagAGGCAGCTTTTGGAGAAATGTTTGTGGAGTGTTGCTTTTGTTTGTACAGTTATTCTATTATCTGTTCTTGACGAAATATTCAAGACTACATTATCCTACAGGGACCCTGGTGGAAGCCAGGAAAACATCTCAGAAaggaaattactttttttacgaaaagagactaaatctgttagATGTAAGTGAACATTGTAGTTAGCGAGAGCAAGGCCATTGATGCTCTTTCACATGATTAAATTCAAAAACCCTGTGAAATAAATATCAAATGGAAAATGCTGTAAAATCTTGCCTGTTACCAATAACACATTAAAAACCTAAATTAGGTCAA
>XM_039781982.1
CTGATTGGCCCGTTGGCCTCACAGATCGTGAGTCTAATATTGGACTTCCTGGTCAAGTAATGTTAGTGCTTTTCACAAGAGAATCGGAAAACGCAATTTGTCAGACTTATCTCCGCTAACCCAATACGTAATCTAGTCGTCGGGTTTCAACGTTATTTCGCAGTGGCAAACAGGGAGGGGATCTATTACCGTTAACATTACTCACCATAAAAGCTAGTACGCTAACGTTGACGTAGGGCTCTGTATTGCTCTAGCCATGTCCGCTTCGGCTGGATCCTCCCCAACGGGTCATAGCTCGGGCCTTGGCCCCGGTATGTCTATGTTTCGCTGGCTAGAAGTGCTGGAGAAAGAGTTTGACAAGGCCTTCGTGGATGTGGATCTGCTGCTCGGAGAAATAGACCCAGATCAAGTCGATATTACGTACGAGGGTCGGCAGAAGATGACCAGCCTAAGCTCCTGTTTTGCTCAGCTCTGTCACAAAACCCAGACGGTTTTCCAACTGAACCATAAACTAGAGGCTCAGCTGGTGGACCTCCGATCTGAGCTGACTGAGGCTAAGGCGGAGCGAaaagtaatagaaagggaggtCCATGACCAGCTCCTGCAGCTTCATGCTCTCCAGTTGCAGCTACATTCTAAGCAAGGTCAGGCTGAGGACTCTGAATCCATCAAAGACAGACTGGAACAGGAGCTTGAGGTCAGCAAGAAGGAGAAATTAGCAGAGGCAAGGCTGGAAACAGAAGGGAGACTatttaagaaagaaaatgaggCTCTTCGCAGACACATGGCAGTACTGCAGGCCGAAGTGTATGGAGCCAGACTGGCTGCCAAATACTTGGACAAGGAACTGGCTGGCAGGGTGCAGCAGATCCAGTTACTGGGCCGTGACATGAAAGGACCTGCACATGACAAGCTGTGGAACCAACTGGAGGCAGAGATTCACCTTCACCGCCATAAGACTGTCATCCGAGCATGTAGGGGTCGTAATGATCCTAAGAAACCTCTGCCCTCTCCTGTTGGACATGACCCAGACATCTTGAAGAAAACCCAGGGAGTTGGCCCTATCAGAAAAGTGGTGCTAGTCAAAGATGATCATGAGGGTCTTGGAATCTCCATTACAGGTGGGAAGGAGCACGGTGTTCCCATTCTAATTTCAGAGATCCATCCAAGTCAGCCTGCAGACAGATGTGGAGGTCTGCATGTCGGGGATGCCATCCTTGCTGTCAACAGCATCAATTTGCGAGATGCCAAACACAAGGAGGCTGTCACCATTCTGTCCCAGCAGCGAGGACAGATAGAGTTTGAGGTGGTGTATGTGGCTCCAGAGGTGGACAGCGATGATGAGAATGTGGAGTATGAAGACGACAGTGGCCATCGCTATCGACTCTACCTAGATGAACTGGAGGACAGCAGCACAGCGGCACCCAGCAACAGCTCGGCATCACTGCAGGCTCTGGAAAAGATGTCACTGAGCAATGGACCAGAGAATGGAGACACTGGGATCTCCATTGAGACAACTTCAGATGAAACCCCTTCAAAGCCACCTGAGTCTGACTGCTCTTCCTAAAGGCTCAGCCTAGCCATTGGTATTTGGAGATATAACGAGGATTTGTGGAAAGATTCCCTCTCAAAGAACTGAATTAAAGAATTCTATGACTAGGGACAAGGGAAAATTAACAGAGAAAGTCTATTTTCCCTTTTTCCTCTTGGTGTTGTGGGGTGGTGGGATTTGGGGGTCTGGCCTGGGCATGTGGCAATGATTTGGGGTAAAAGTTCACATTTGAAGAAGCGGAGGTGTAAAATTTGTAGAGGAGGGAGCAATACTGAACAATGTGACTTTTTCTTGATATTATATTAAGATAATGAAAATTGACAGGATAGCTGTATGTGAGAAAACCGCAGAAGGAAGTAGATGTCATGGAGGAACACTGACATCATGAAAGAAGAAGTtattcattttgaaaatgtctttcagAGGCAGCTTTTGGAGAAATGTTTGTGGAGTGTTGCTTTTGTTTGTACAGTTATTCTATTATCTGTTCTTGACGAAATATTCAAGACTACATTATCCTACAGGGACCCTGGTGGAAGCCAGGAAAACATCTCAGAAaggaaattactttttttacgaaaagagactaaatctgttagATGTAAGTGAACATTGTAGTTAGCGAGAGCAAGGCCATTGATGCTCTTTCACATGATTAAATTCAAAAACCCTGTGAAATAAATATCAAATGGAAAATGCTGTAAAATCTTGCCTGTTACCAATAACACATTAAAAACCTAAATTAGGTCAA
>XM_039781983.1
CCTGATTGGCCCGTTGGCCTCACAGATCGTGAGTCTAATATTGGACTTCCTGGTCAAGTAATGTTAGTGCTTTTCACAAGAGAATCGGAAAACGCAATTTGTCAGACTTATCTCCGCTAACCCAATACGTAATCTAGTCGTCGGGTTTCAACGTTATTTCGCAGTGGCAAACAGGGAGGGGATCTATTACCGTTAACATTACTCACCATAAAAGCTAGTACGCTAACGTTGACGTAGGGCTCTGTATTGCTCTAGCCATGTCCGCTTCGGCTGGATCCTCCCCAACGGGTCATAGCTCGGGCCTTGGCCCCGGTATGTCTATGTTTCGCTGGCTAGAAGTGCTGGAGAAAGAGTTTGACAAGGCCTTCGTGGATGTGGATCTGCTGCTCGGAGAAATAGACCCAGATCAAGTCGATATTACGTACGAGGGTCGGCAGAAGATGACCAGCCTAAGCTCCTGTTTTGCTCAGCTCTGTCACAAAACCCAGACGGTTTTCCAACTGAACCATAAACTAGAGGCTCAGCTGGTGGACCTCCGATCTGAGCTGACTGAGGCTAAGGCGGAGCGAaaagtaatagaaagggaggtCCATGACCAGCTCCTGCAGCTTCATGCTCTCCAGTTGCAGCTACATTCTAAGCAAGGTCAGGCTGAGGACTCTGAATCCATCAAAGACAGACTGGAGCTTGAGGTCAGCAAGAAGGAGAAATTAGCAGAGGCAAGGCTGGAAACAGAAGGGAGACTatttaagaaagaaaatgaggCTCTTCGCAGACACATGGCAGTACTGCAGGCCGAAGTGTATGGAGCCAGACTGGCTGCCAAATACTTGGACAAGGAACTGGCTGGCAGGGTGCAGCAGATCCAGTTACTGGGCCGTGACATGAAAGGACCTGCACATGACAAGCTGTGGAACCAACTGGAGGCAGAGATTCACCTTCACCGCCATAAGACTGTCATCCGAGCATGTAGGGGTCGTAATGATCCTAAGAAACCTCTGCCCTCTCCTGTTGGACATGACCCAGACATCTTGAAGAAAACCCAGGGAGTTGGCCCTATCAGAAAAGTGGTGCTAGTCAAAGATGATCATGAGGGTCTTGGAATCTCCATTACAGGTGGGAAGGAGCACGGTGTTCCCATTCTAATTTCAGAGATCCATCCAAGTCAGCCTGCAGACAGATGTGGAGGTCTGCATGTCGGGGATGCCATCCTTGCTGTCAACAGCATCAATTTGCGAGATGCCAAACACAAGGAGGCTGTCACCATTCTGTCCCAGCAGCGAGGACAGATAGAGTTTGAGGTGGTGTATGTGGCTCCAGAGGTGGACAGCGATGATGAGAATGTGGAGTATGAAGACGACAGTGGCCATCGCTATCGACTCTACCTAGATGAACTGGAGGACAGCAGCACAGCGGCACCCAGCAACAGCTCGGCATCACTGCAGGCTCTGGAAAAGATGTCACTGAGCAATGGACCAGAGAATGGAGACACTGGGATCTCCATTGAGACAACTTCAGATGAAACCCCTTCAAAGCCACCTGAGTCTGACTGCTCTTCCTAAAGGCTCAGCCTAGCCATTGGTATTTGGAGATATAACGAGGATTTGTGGAAAGATTCCCTCTCAAAGAACTGAATTAAAGAATTCTATGACTAGGGACAAGGGAAAATTAACAGAGAAAGTCTATTTTCCCTTTTTCCTCTTGGTGTTGTGGGGTGGTGGGATTTGGGGGTCTGGCCTGGGCATGTGGCAATGATTTGGGGTAAAAGTTCACATTTGAAGAAGCGGAGGTGTAAAATTTGTAGAGGAGGGAGCAATACTGAACAATGTGACTTTTTCTTGATATTATATTAAGATAATGAAAATTGACAGGATAGCTGTATGTGAGAAAACCGCAGAAGGAAGTAGATGTCATGGAGGAACACTGACATCATGAAAGAAGAAGTtattcattttgaaaatgtctttcagAGGCAGCTTTTGGAGAAATGTTTGTGGAGTGTTGCTTTTGTTTGTACAGTTATTCTATTATCTGTTCTTGACGAAATATTCAAGACTACATTATCCTACAGGGACCCTGGTGGAAGCCAGGAAAACATCTCAGAAaggaaattactttttttacgaaaagagactaaatctgttagATGTAAGTGAACATTGTAGTTAGCGAGAGCAAGGCCATTGATGCTCTTTCACATGATTAAATTCAAAAACCCTGTGAAATAAATATCAAATGGAAAATGCTGTAAAATCTTGCCTGTTACCAATAACACATTAAAAACCTAAATTAGGTCAA

Function

symbol description
gopc Predicted to enable transmembrane transporter binding activity. Predicted to be involved in cytoplasmic sequestering of CFTR protein and negative regulation of protein localization to cell surface. Predicted to be active in Golgi apparatus; membrane; and trans-Golgi network transport vesicle. Orthologous to human GOPC (golgi associated PDZ and coiled-coil motif containing).

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description
K24054 GOPC; golgi-associated PDZ and coiled-coil motif-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781981.1 True 2327 mRNA 0.46 9 5986437 6009439
XM_039781982.1 False 2303 mRNA 0.46 8 5986437 6009439
XM_039781983.1 False 2298 mRNA 0.46 8 5986437 6009440

Neighbor

gene id symbol gene type direction distance location
lrfn2b LOC103354004,LOC104943823 coding downstream 398200 5389153 ~ 5588237 (-)
LOC120547345 NA coding downstream 706717 5259465 ~ 5279720 (-)
LOC120547277 NA coding downstream 732737 5247945 ~ 5253700 (-)
LOC120546193 NA coding downstream 862656 5115179 ~ 5123781 (-)
LOC120546227 htr1e coding downstream 1072246 4871142 ~ 4914191 (-)
LOC120546792 LOC104959018 coding upstream 61106 6070546 ~ 6073220 (-)
LOC120546794 NA coding upstream 453500 6462940 ~ 6464802 (-)
meis2b LOC104938729,LOC103355645,LOC105017579 coding upstream 753271 6762711 ~ 6800793 (-)
cnih3 cnih3,LOC108248696,LOC101155158,LOC107095392,LOC106527994,LOC107384796,LOC100708389,LOC103358879,LOC101472542 coding upstream 1435421 7444861 ~ 7588065 (-)
LOC120546734 cd2ap coding upstream 2242276 8251716 ~ 8340747 (-)
G182517 NA non-coding downstream 1134 5984850 ~ 5985303 (-)
G182518 NA non-coding downstream 3683 5981404 ~ 5982754 (-)
G182513 NA non-coding downstream 10047 5976121 ~ 5976390 (-)
LOC120546803 NA non-coding downstream 11538 5970833 ~ 5974899 (-)
G182507 NA non-coding downstream 30487 5930663 ~ 5955950 (-)
G182562 NA non-coding upstream 88975 6098415 ~ 6098646 (-)
G182566 NA non-coding upstream 118165 6127605 ~ 6128535 (-)
G182567 NA non-coding upstream 119143 6128583 ~ 6128828 (-)
G182574 NA non-coding upstream 150125 6159565 ~ 6159858 (-)
G182577 NA non-coding upstream 154775 6164215 ~ 6164437 (-)
G182502 NA other downstream 74528 5911312 ~ 5911909 (-)
G182474 NA other downstream 193499 5790289 ~ 5792938 (-)
zgc:112001 LOC103354005,LOC100690140,LOC102211542,LOC102799045,LOC102300982 other downstream 672722 5311506 ~ 5313715 (-)
smim8 smim8 other downstream 1182945 4745773 ~ 4803492 (-)
G182121 NA other downstream 1820441 4163358 ~ 4165996 (-)
cgrrf1 NA other upstream 223302 6232742 ~ 6269143 (-)
G182764 NA other upstream 691051 6700491 ~ 6701117 (-)
G182952 NA other upstream 1752125 7761565 ~ 7766386 (-)
G182977 NA other upstream 2015275 8024715 ~ 8025044 (-)
opn5 opn5,LOC102784832,LOC100710023,LOC102313452,LOC104967814,LOC106933152,LOC108249775 other upstream 2040018 8049458 ~ 8126664 (-)

Expression


Co-expression Network